RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 CCDC88CQ9P219 2028 aa11.14□□□□□ -0.63
LTBR-203ENST00000441074 SPEGQ15772 3267 aa11.13□□□□□ -0.63
LTBR-203ENST00000441074 A0A0C4DFX4 3053 aa11.13□□□□□ -0.63
LTBR-203ENST00000441074 SNAPC5O75971 98 aa11.13□□□□□ -0.63
LTBR-203ENST00000441074 POP4O95707 220 aaKnown RBP11.13□□□□□ -0.63
LTBR-203ENST00000441074 F8A1P23610 371 aa11.13□□□□□ -0.63
LTBR-203ENST00000441074 TAS2R50P59544 299 aa11.13□□□□□ -0.63
LTBR-203ENST00000441074 POLR2LP62875 67 aaKnown RBP11.13□□□□□ -0.63
LTBR-203ENST00000441074 DHODHQ02127 395 aa11.13□□□□□ -0.63
LTBR-203ENST00000441074 SLC27A4Q6P1M0 643 aa11.13□□□□□ -0.63
LTBR-203ENST00000441074 SEZ6L2Q6UXD5 910 aa11.13□□□□□ -0.63
LTBR-203ENST00000441074 SIAH3Q8IW03 269 aa11.13□□□□□ -0.63
LTBR-203ENST00000441074 OR2A12Q8NGT7 310 aa11.13□□□□□ -0.63
LTBR-203ENST00000441074 OR56B4Q8NH76 319 aa11.13□□□□□ -0.63
LTBR-203ENST00000441074 SPRYD4Q8WW59 207 aaPredicted RBP11.13□□□□□ -0.63
LTBR-203ENST00000441074 NXPE3Q969Y0 559 aa11.13□□□□□ -0.63
LTBR-203ENST00000441074 NEURL3Q96EH8 262 aa11.13□□□□□ -0.63
LTBR-203ENST00000441074 C12orf66Q96MD2 445 aa11.13□□□□□ -0.63
LTBR-203ENST00000441074 GUCD1Q96NT3 240 aa11.13□□□□□ -0.63
LTBR-203ENST00000441074 WFDC6Q9BQY6 131 aa11.13□□□□□ -0.63
LTBR-203ENST00000441074 FNDC11Q9BVV2 318 aa11.13□□□□□ -0.63
LTBR-203ENST00000441074 PLA2G12AQ9BZM1 189 aa11.13□□□□□ -0.63
LTBR-203ENST00000441074 METTL17Q9H7H0 456 aaPredicted RBP11.13□□□□□ -0.63
LTBR-203ENST00000441074 CXorf36Q9H7Y0 433 aa11.13□□□□□ -0.63
LTBR-203ENST00000441074 ZMAT5Q9UDW3 170 aaKnown RBP11.13□□□□□ -0.63
LTBR-203ENST00000441074 ICKQ9UPZ9 632 aa11.13□□□□□ -0.63
LTBR-203ENST00000441074 BAIAP2Q9UQB8 552 aa11.13□□□□□ -0.63
LTBR-203ENST00000441074 LIPT1Q9Y234 373 aa11.13□□□□□ -0.63
LTBR-203ENST00000441074 GPR52Q9Y2T5 361 aa11.13□□□□□ -0.63
LTBR-203ENST00000441074 FOXE1O00358 373 aaPredicted RBP11.13□□□□□ -0.63
LTBR-203ENST00000441074 ZNF197O14709 1029 aa11.13□□□□□ -0.63
LTBR-203ENST00000441074 SGTAO43765 313 aa11.13□□□□□ -0.63
LTBR-203ENST00000441074 KLHL18O94889 574 aa11.13□□□□□ -0.63
LTBR-203ENST00000441074 PROS1P07225 676 aa11.13□□□□□ -0.63
LTBR-203ENST00000441074 RAB3AP20336 220 aa11.13□□□□□ -0.63
LTBR-203ENST00000441074 SELENOPP49908 381 aa11.13□□□□□ -0.63
LTBR-203ENST00000441074 RNF144AP50876 292 aaPredicted RBP11.13□□□□□ -0.63
LTBR-203ENST00000441074 BLVRAP53004 296 aa11.13□□□□□ -0.63
LTBR-203ENST00000441074 CDH11P55287 796 aa11.13□□□□□ -0.63
LTBR-203ENST00000441074 TSPAN5P62079 268 aa11.13□□□□□ -0.63
LTBR-203ENST00000441074 TNFAIP8L2Q6P589 184 aaPredicted RBP11.13□□□□□ -0.63
LTBR-203ENST00000441074 IL20RBQ6UXL0 311 aa11.13□□□□□ -0.63
LTBR-203ENST00000441074 RRM2BQ7LG56 351 aa11.13□□□□□ -0.63
LTBR-203ENST00000441074 IQCHQ86VS3 1027 aa11.13□□□□□ -0.63
LTBR-203ENST00000441074 BEST4Q8NFU0 473 aa11.13□□□□□ -0.63
LTBR-203ENST00000441074 RPLP0P6Q8NHW5 317 aa11.13□□□□□ -0.63
LTBR-203ENST00000441074 WDR48Q8TAF3 677 aa11.13□□□□□ -0.63
LTBR-203ENST00000441074 TEX47Q8TBZ9 253 aa11.13□□□□□ -0.63
LTBR-203ENST00000441074 RFKQ969G6 155 aa11.13□□□□□ -0.63
LTBR-203ENST00000441074 YIPF5Q969M3 257 aa11.13□□□□□ -0.63
LTBR-203ENST00000441074 ZNF607Q96SK3 696 aa11.13□□□□□ -0.63
LTBR-203ENST00000441074 MS4A7Q9GZW8 240 aaPredicted RBP11.13□□□□□ -0.63
LTBR-203ENST00000441074 SPRTNQ9H040 489 aaPredicted RBP11.13□□□□□ -0.63
LTBR-203ENST00000441074 IL20Q9NYY1 176 aa11.13□□□□□ -0.63
LTBR-203ENST00000441074 MARK1Q9P0L2 795 aa11.13□□□□□ -0.63
LTBR-203ENST00000441074 NFKBIL1Q9UBC1 381 aaPredicted RBP11.13□□□□□ -0.63
LTBR-203ENST00000441074 EXOGQ9Y2C4 368 aaKnown RBP11.13□□□□□ -0.63
LTBR-203ENST00000441074 A0A1B0GVC2 190 aa11.12□□□□□ -0.63
LTBR-203ENST00000441074 A6NIN4 97 aa11.12□□□□□ -0.63
LTBR-203ENST00000441074 PRRT4C9JH25 899 aa11.12□□□□□ -0.63
LTBR-203ENST00000441074 ZNF593O00488 134 aaPredicted RBP11.12□□□□□ -0.63
LTBR-203ENST00000441074 DVL2O14641 736 aa11.12□□□□□ -0.63
LTBR-203ENST00000441074 RNF13O43567 381 aa11.12□□□□□ -0.63
LTBR-203ENST00000441074 TOXO94900 526 aa11.12□□□□□ -0.63
LTBR-203ENST00000441074 IGHA1P01876 353 aa11.12□□□□□ -0.63
LTBR-203ENST00000441074 CBX5P45973 191 aa11.12□□□□□ -0.63
LTBR-203ENST00000441074 CCR6P51684 374 aa11.12□□□□□ -0.63
LTBR-203ENST00000441074 RPS26P62854 115 aaKnown RBP11.12□□□□□ -0.63
LTBR-203ENST00000441074 BDH1Q02338 343 aa11.12□□□□□ -0.63
LTBR-203ENST00000441074 DLX2Q07687 328 aaPredicted RBP11.12□□□□□ -0.63
LTBR-203ENST00000441074 TMEM44Q2T9K0 475 aa11.12□□□□□ -0.63
LTBR-203ENST00000441074 ZNF791Q3KP31 576 aaPredicted RBP11.12□□□□□ -0.63
LTBR-203ENST00000441074 LRFN4Q6PJG9 635 aa11.12□□□□□ -0.63
LTBR-203ENST00000441074 FAM198BQ6UWH4 519 aa11.12□□□□□ -0.63
LTBR-203ENST00000441074 MORN4Q8NDC4 146 aa11.12□□□□□ -0.63
LTBR-203ENST00000441074 OR4F15Q8NGB8 312 aa11.12□□□□□ -0.63
LTBR-203ENST00000441074 TMEM159Q96B96 161 aa11.12□□□□□ -0.63
LTBR-203ENST00000441074 FOPNLQ96NB1 174 aa11.12□□□□□ -0.63
LTBR-203ENST00000441074 ZNF416Q9BWM5 594 aa11.12□□□□□ -0.63
LTBR-203ENST00000441074 MCCC2Q9HCC0 563 aa11.12□□□□□ -0.63
LTBR-203ENST00000441074 BRD7Q9NPI1 651 aa11.12□□□□□ -0.63
LTBR-203ENST00000441074 PCDHB16Q9NRJ7 776 aa11.12□□□□□ -0.63
LTBR-203ENST00000441074 RASD1Q9Y272 281 aa11.12□□□□□ -0.63
LTBR-203ENST00000441074 FZD7O75084 574 aa11.12□□□□□ -0.63
LTBR-203ENST00000441074 UBXN7O94888 489 aa11.12□□□□□ -0.63
LTBR-203ENST00000441074 CTSLP07711 333 aa11.12□□□□□ -0.63
LTBR-203ENST00000441074 HOXB3P14651 431 aaPredicted RBP11.12□□□□□ -0.63
LTBR-203ENST00000441074 TCTE1Q5JU00 501 aa11.12□□□□□ -0.63
LTBR-203ENST00000441074 TANGO2Q6ICL3 276 aa11.12□□□□□ -0.63
LTBR-203ENST00000441074 SMARCD3Q6STE5 483 aa11.12□□□□□ -0.63
LTBR-203ENST00000441074 ZNF322Q6U7Q0 402 aaPredicted RBP11.12□□□□□ -0.63
LTBR-203ENST00000441074 SLCO4C1Q6ZQN7 724 aa11.12□□□□□ -0.63
LTBR-203ENST00000441074 RASSF6Q6ZTQ3 369 aa11.12□□□□□ -0.63
LTBR-203ENST00000441074 CACUL1Q86Y37 369 aa11.12□□□□□ -0.63
LTBR-203ENST00000441074 KLBQ86Z14 1044 aa11.12□□□□□ -0.63
LTBR-203ENST00000441074 TRAM1L1Q8N609 369 aa11.12□□□□□ -0.63
LTBR-203ENST00000441074 WDR34Q96EX3 536 aa11.12□□□□□ -0.63
LTBR-203ENST00000441074 RPP25Q9BUL9 199 aaKnown RBP11.12□□□□□ -0.63
LTBR-203ENST00000441074 EFCAB11Q9BUY7 163 aa11.12□□□□□ -0.63
LTBR-203ENST00000441074 SLC6A16Q9GZN6 736 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms