RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 PINK1Q9BXM7 581 aa12.94□□□□□ -0.34
PTCHD3-201ENST00000438700 TMEM74BQ9NUR3 256 aa12.94□□□□□ -0.34
PTCHD3-201ENST00000438700 SLC13A4Q9UKG4 626 aa12.94□□□□□ -0.34
PTCHD3-201ENST00000438700 GPR52Q9Y2T5 361 aa12.94□□□□□ -0.34
PTCHD3-201ENST00000438700 KLK4Q9Y5K2 254 aa12.94□□□□□ -0.34
PTCHD3-201ENST00000438700 SPEGQ15772 3267 aa12.94□□□□□ -0.34
PTCHD3-201ENST00000438700 A0A087WUU8 490 aa12.94□□□□□ -0.34
PTCHD3-201ENST00000438700 SMIM30A4D0T7 59 aa12.94□□□□□ -0.34
PTCHD3-201ENST00000438700 CASC3O15234 703 aaKnown RBP12.94□□□□□ -0.34
PTCHD3-201ENST00000438700 SLITRK5O94991 958 aa12.94□□□□□ -0.34
PTCHD3-201ENST00000438700 ALX3O95076 343 aa12.94□□□□□ -0.34
PTCHD3-201ENST00000438700 SNX4O95219 450 aa12.94□□□□□ -0.34
PTCHD3-201ENST00000438700 ALPPP05187 535 aa12.94□□□□□ -0.34
PTCHD3-201ENST00000438700 SOX6P35712 828 aa12.94□□□□□ -0.34
PTCHD3-201ENST00000438700 PDX1P52945 283 aa12.94□□□□□ -0.34
PTCHD3-201ENST00000438700 NXPH1P58417 271 aa12.94□□□□□ -0.34
PTCHD3-201ENST00000438700 CD83Q01151 205 aa12.94□□□□□ -0.34
PTCHD3-201ENST00000438700 ID2Q02363 134 aa12.94□□□□□ -0.34
PTCHD3-201ENST00000438700 MXD1Q05195 221 aa12.94□□□□□ -0.34
PTCHD3-201ENST00000438700 MAP4K2Q12851 820 aa12.94□□□□□ -0.34
PTCHD3-201ENST00000438700 TMEM201Q5SNT2 666 aa12.94□□□□□ -0.34
PTCHD3-201ENST00000438700 ARMC4Q5T2S8 1044 aa12.94□□□□□ -0.34
PTCHD3-201ENST00000438700 ARMC6Q6NXE6 501 aa12.94□□□□□ -0.34
PTCHD3-201ENST00000438700 SLC36A4Q6YBV0 504 aa12.94□□□□□ -0.34
PTCHD3-201ENST00000438700 GKN2Q86XP6 184 aa12.94□□□□□ -0.34
PTCHD3-201ENST00000438700 KIF18BQ86Y91 864 aa12.94□□□□□ -0.34
PTCHD3-201ENST00000438700 SLC9A6Q92581 669 aa12.94□□□□□ -0.34
PTCHD3-201ENST00000438700 TMEM80Q96HE8 168 aa12.94□□□□□ -0.34
PTCHD3-201ENST00000438700 HHATLQ9HCP6 504 aa12.94□□□□□ -0.34
PTCHD3-201ENST00000438700 RPL36Q9Y3U8 105 aaKnown RBP12.94□□□□□ -0.34
PTCHD3-201ENST00000438700 CHST2Q9Y4C5 530 aa12.94□□□□□ -0.34
PTCHD3-201ENST00000438700 V9GYH0 126 aa12.94□□□□□ -0.34
PTCHD3-201ENST00000438700 A0A0C4DFX4 3053 aa12.93□□□□□ -0.34
PTCHD3-201ENST00000438700 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.93□□□□□ -0.34
PTCHD3-201ENST00000438700 PNMA8CA0A1B0GUJ8 204 aa12.93□□□□□ -0.34
PTCHD3-201ENST00000438700 A0A1W2PQ09 198 aa12.93□□□□□ -0.34
PTCHD3-201ENST00000438700 SDC3O75056 442 aa12.93□□□□□ -0.34
PTCHD3-201ENST00000438700 CPN2P22792 545 aa12.93□□□□□ -0.34
PTCHD3-201ENST00000438700 CSTF2P33240 577 aaKnown RBP eCLIP12.93□□□□□ -0.34
PTCHD3-201ENST00000438700 TRHRP34981 398 aaPredicted RBP12.93□□□□□ -0.34
PTCHD3-201ENST00000438700 ETV6P41212 452 aa12.93□□□□□ -0.34
PTCHD3-201ENST00000438700 GIPRP48546 466 aa12.93□□□□□ -0.34
PTCHD3-201ENST00000438700 GPLD1P80108 840 aa12.93□□□□□ -0.34
PTCHD3-201ENST00000438700 SPHARQ15513 63 aa12.93□□□□□ -0.34
PTCHD3-201ENST00000438700 SYT14P1Q58G82 188 aa12.93□□□□□ -0.34
PTCHD3-201ENST00000438700 CLEC12AQ5QGZ9 265 aa12.93□□□□□ -0.34
PTCHD3-201ENST00000438700 RAB43Q86YS6 212 aa12.93□□□□□ -0.34
PTCHD3-201ENST00000438700 ARL14Q8N4G2 192 aa12.93□□□□□ -0.34
PTCHD3-201ENST00000438700 MOAP1Q96BY2 351 aa12.93□□□□□ -0.34
PTCHD3-201ENST00000438700 GIMAP5Q96F15 307 aa12.93□□□□□ -0.34
PTCHD3-201ENST00000438700 RNF170Q96K19 258 aa12.93□□□□□ -0.34
PTCHD3-201ENST00000438700 RERGLQ9H628 205 aa12.93□□□□□ -0.34
PTCHD3-201ENST00000438700 SNTG1Q9NSN8 517 aa12.93□□□□□ -0.34
PTCHD3-201ENST00000438700 THADAQ6YHU6 1953 aa12.93□□□□□ -0.34
PTCHD3-201ENST00000438700 H0YGG7 62 aa12.93□□□□□ -0.34
PTCHD3-201ENST00000438700 HBQ1P09105 142 aa12.93□□□□□ -0.34
PTCHD3-201ENST00000438700 DDOSTP39656 456 aa12.93□□□□□ -0.34
PTCHD3-201ENST00000438700 ARF3P61204 181 aaPredicted RBP12.93□□□□□ -0.34
PTCHD3-201ENST00000438700 ALDH6A1Q02252 535 aaKnown RBP12.93□□□□□ -0.34
PTCHD3-201ENST00000438700 KRR1Q13601 381 aaKnown RBP12.93□□□□□ -0.34
PTCHD3-201ENST00000438700 SNAPC1Q16533 368 aa12.93□□□□□ -0.34
PTCHD3-201ENST00000438700 DEFB133Q30KQ1 61 aa12.93□□□□□ -0.34
PTCHD3-201ENST00000438700 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.93□□□□□ -0.34
PTCHD3-201ENST00000438700 C1orf94Q6P1W5 598 aa12.93□□□□□ -0.34
PTCHD3-201ENST00000438700 ADAMTS15Q8TE58 950 aa12.93□□□□□ -0.34
PTCHD3-201ENST00000438700 PIK3R3Q92569 461 aa12.93□□□□□ -0.34
PTCHD3-201ENST00000438700 CDS1Q92903 461 aa12.93□□□□□ -0.34
PTCHD3-201ENST00000438700 RERGQ96A58 199 aaPredicted RBP12.93□□□□□ -0.34
PTCHD3-201ENST00000438700 SLC35A4Q96G79 324 aa12.93□□□□□ -0.34
PTCHD3-201ENST00000438700 FAM46AQ96IP4 442 aaKnown RBP12.93□□□□□ -0.34
PTCHD3-201ENST00000438700 C10orf90Q96M02 699 aa12.93□□□□□ -0.34
PTCHD3-201ENST00000438700 TAPBPLQ9BX59 468 aa12.93□□□□□ -0.34
PTCHD3-201ENST00000438700 IRF2BPLQ9H1B7 796 aa12.93□□□□□ -0.34
PTCHD3-201ENST00000438700 SMURF1Q9HCE7 757 aa12.93□□□□□ -0.34
PTCHD3-201ENST00000438700 SEMA4GQ9NTN9 838 aa12.93□□□□□ -0.34
PTCHD3-201ENST00000438700 LYARQ9NX58 379 aaKnown RBP12.93□□□□□ -0.34
PTCHD3-201ENST00000438700 POMT2Q9UKY4 750 aa12.93□□□□□ -0.34
PTCHD3-201ENST00000438700 LSM2Q9Y333 95 aaKnown RBP12.93□□□□□ -0.34
PTCHD3-201ENST00000438700 A0A0B4J293 547 aa12.92□□□□□ -0.34
PTCHD3-201ENST00000438700 A0A0G2JMP0 313 aa12.92□□□□□ -0.34
PTCHD3-201ENST00000438700 A0A0X1KG70 313 aa12.92□□□□□ -0.34
PTCHD3-201ENST00000438700 SCG5P05408 212 aa12.92□□□□□ -0.34
PTCHD3-201ENST00000438700 SSTR4P31391 388 aa12.92□□□□□ -0.34
PTCHD3-201ENST00000438700 COX10Q12887 443 aa12.92□□□□□ -0.34
PTCHD3-201ENST00000438700 TIMM50Q3ZCQ8 353 aa12.92□□□□□ -0.34
PTCHD3-201ENST00000438700 TSSK4Q6SA08 328 aa12.92□□□□□ -0.34
PTCHD3-201ENST00000438700 PAMR1Q6UXH9 720 aa12.92□□□□□ -0.34
PTCHD3-201ENST00000438700 ZNF730Q6ZMV8 503 aa12.92□□□□□ -0.34
PTCHD3-201ENST00000438700 RNF44Q7L0R7 432 aa12.92□□□□□ -0.34
PTCHD3-201ENST00000438700 LRRC25Q8N386 305 aaPredicted RBP12.92□□□□□ -0.34
PTCHD3-201ENST00000438700 CAMKVQ8NCB2 501 aa12.92□□□□□ -0.34
PTCHD3-201ENST00000438700 RNF31Q96EP0 1072 aa12.92□□□□□ -0.34
PTCHD3-201ENST00000438700 CITED4Q96RK1 184 aa12.92□□□□□ -0.34
PTCHD3-201ENST00000438700 ASPNQ9BXN1 380 aa12.92□□□□□ -0.34
PTCHD3-201ENST00000438700 ACTRT3Q9BYD9 372 aa12.92□□□□□ -0.34
PTCHD3-201ENST00000438700 POLR2J2Q9GZM3 115 aaKnown RBP12.92□□□□□ -0.34
PTCHD3-201ENST00000438700 NPAP1Q9NZP6 1156 aa12.92□□□□□ -0.34
PTCHD3-201ENST00000438700 CARD8Q9Y2G2 431 aa12.92□□□□□ -0.34
PTCHD3-201ENST00000438700 LAMA1P25391 3075 aa12.92□□□□□ -0.34
PTCHD3-201ENST00000438700 MYL12BO14950 172 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms