RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 SCRN2Q96FV2 425 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 UHRF2Q96PU4 802 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 ST6GALNAC5Q9BVH7 336 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 GPR83Q9NYM4 423 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 SLC22A7Q9Y694 548 aa10.59□□□□□ -0.71
SCN4A-201ENST00000435607 EIF3FO00303 357 aaPredicted RBP10.58□□□□□ -0.72
SCN4A-201ENST00000435607 PCDH17O14917 1159 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 SPINT3P49223 89 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 OR4D6Q8NGJ1 314 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 ST7LQ8TDW4 575 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 MMP27Q9H306 513 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 KLHL9Q9P2J3 617 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 NOCTQ9UK39 431 aaKnown RBP10.58□□□□□ -0.72
SCN4A-201ENST00000435607 LSM5Q9Y4Y9 91 aaKnown RBP10.58□□□□□ -0.72
SCN4A-201ENST00000435607 NPIPA5A0A0B4J1W7 369 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 NPIPA7E9PJI5 369 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 AP1G1O43747 822 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 GALR3O60755 368 aaPredicted RBP10.58□□□□□ -0.72
SCN4A-201ENST00000435607 TFPTP0C1Z6 253 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 NPIPA8P0DM63 369 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 RNF144AP50876 292 aaPredicted RBP10.58□□□□□ -0.72
SCN4A-201ENST00000435607 KANK2Q63ZY3 851 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 ILDR1Q86SU0 546 aaPredicted RBP10.58□□□□□ -0.72
SCN4A-201ENST00000435607 VWA5B2Q8N398 1253 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 RHEBL1Q8TAI7 183 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 LRR1Q96L50 414 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 PLCXD1Q9NUJ7 323 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 SLC39A9Q9NUM3 307 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 RFPL2O75678 378 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 PRSS3P35030 304 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 SLC1A3P43003 542 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 FAPQ12884 760 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 OR6T1Q8NGN1 323 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 CMTM2Q8TAZ6 248 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 NKX3-1Q99801 234 aaPredicted RBP10.58□□□□□ -0.72
SCN4A-201ENST00000435607 ULBP2Q9BZM5 246 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 GPATCH2Q9NW75 528 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 SSUH2Q9Y2M2 353 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 EME2A4GXA9 379 aaPredicted RBP10.58□□□□□ -0.72
SCN4A-201ENST00000435607 ZIC2O95409 532 aaPredicted RBP10.58□□□□□ -0.72
SCN4A-201ENST00000435607 TMEM11P17152 192 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 RAB3BP20337 219 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 SSR4P51571 173 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 TMEM244Q5VVB8 128 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 OR4K13Q8NH42 304 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 MYADMQ96S97 322 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 SLC2A6Q9UGQ3 507 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 PCYT1BQ9Y5K3 369 aaPredicted RBP10.58□□□□□ -0.72
SCN4A-201ENST00000435607 BOLA2-SMG1P6H3BVE0 249 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 FZD9O00144 591 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 ZNF182P17025 639 aaPredicted RBP10.58□□□□□ -0.72
SCN4A-201ENST00000435607 TBPP20226 339 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 KRBOX4Q5JUW0 171 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 ZNF684Q5T5D7 378 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 MEX3BQ6ZN04 569 aaKnown RBP10.58□□□□□ -0.72
SCN4A-201ENST00000435607 HUS1BQ8NHY5 278 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 STT3BQ8TCJ2 826 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 RHBDD3Q9Y3P4 386 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 BEST1O76090 585 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 VNN1O95497 513 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 EPHA5P54756 1037 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 SEC61A1P61619 476 aaKnown RBP10.58□□□□□ -0.72
SCN4A-201ENST00000435607 RPS23P62266 143 aaKnown RBP10.58□□□□□ -0.72
SCN4A-201ENST00000435607 CDKN3Q16667 212 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 MOB3CQ70IA8 216 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 FIBINQ8TAL6 211 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 ZNF417Q8TAU3 575 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 FNDC9Q8TBE3 224 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 TMEM43Q9BTV4 400 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 ARL6Q9H0F7 186 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 TUBG2Q9NRH3 451 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 LRIT1Q9P2V4 623 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 RIMBP3CA6NJZ7 1639 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 RIMBP3BA6NNM3 1639 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 RIMBP3Q9UFD9 1639 aa10.58□□□□□ -0.72
SCN4A-201ENST00000435607 IGLV3-22A0A075B6J6 115 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 YY2O15391 372 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 ANXA7P20073 488 aaKnown RBP10.57□□□□□ -0.72
SCN4A-201ENST00000435607 GPR50Q13585 617 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 MPEG1Q2M385 716 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 TECPR1Q7Z6L1 1165 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 ZNF761Q86XN6 746 aaPredicted RBP10.57□□□□□ -0.72
SCN4A-201ENST00000435607 MDGA1Q8NFP4 955 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 PIGCQ92535 297 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 TCTN2Q96GX1 697 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 KIAA1456Q9P272 454 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 NDRG3Q9UGV2 375 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 COQ4Q9Y3A0 265 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 NME7Q9Y5B8 376 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.57□□□□□ -0.72
SCN4A-201ENST00000435607 TCRBV7S2A1N4TA0A589 114 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 ZNF840PA6NDX5 716 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 C4orf47A7E2U8 309 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 PPP1R11O60927 126 aaPredicted RBP10.57□□□□□ -0.72
SCN4A-201ENST00000435607 BMI1P35226 326 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 P2RY2P41231 377 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 PTH2RP49190 550 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 CTSL3PQ5NE16 218 aa10.57□□□□□ -0.72
SCN4A-201ENST00000435607 ZNF648Q5T619 568 aaPredicted RBP10.57□□□□□ -0.72
SCN4A-201ENST00000435607 NDUFAF5Q5TEU4 345 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms