RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 PRAMEF27A3QJZ7 478 aa16.69■□□□□ 0.26
HLA-F-220ENST00000434407 KRT75O95678 551 aa16.69■□□□□ 0.26
HLA-F-220ENST00000434407 NCF2P19878 526 aaPredicted RBP16.69■□□□□ 0.26
HLA-F-220ENST00000434407 CAPN3P20807 821 aa16.69■□□□□ 0.26
HLA-F-220ENST00000434407 ATP6V1C1P21283 382 aa16.69■□□□□ 0.26
HLA-F-220ENST00000434407 ATP12AP54707 1039 aa16.69■□□□□ 0.26
HLA-F-220ENST00000434407 DSCR4P56555 118 aaPredicted RBP16.69■□□□□ 0.26
HLA-F-220ENST00000434407 FUT5Q11128 374 aa16.69■□□□□ 0.26
HLA-F-220ENST00000434407 GANABQ14697 944 aaKnown RBP16.69■□□□□ 0.26
HLA-F-220ENST00000434407 AGKQ53H12 422 aa16.69■□□□□ 0.26
HLA-F-220ENST00000434407 WIPI1Q5MNZ9 446 aaPredicted RBP16.69■□□□□ 0.26
HLA-F-220ENST00000434407 LRIF1Q5T3J3 769 aa16.69■□□□□ 0.26
HLA-F-220ENST00000434407 VASNQ6EMK4 673 aa16.69■□□□□ 0.26
HLA-F-220ENST00000434407 MTFR2Q6P444 385 aa16.69■□□□□ 0.26
HLA-F-220ENST00000434407 YRDCQ86U90 279 aaKnown RBP16.69■□□□□ 0.26
HLA-F-220ENST00000434407 MISPQ8IVT2 679 aa16.69■□□□□ 0.26
HLA-F-220ENST00000434407 OR4K17Q8NGC6 315 aa16.69■□□□□ 0.26
HLA-F-220ENST00000434407 PHF10Q8WUB8 498 aaKnown RBP16.69■□□□□ 0.26
HLA-F-220ENST00000434407 XAGE5Q8WWM1 108 aa16.69■□□□□ 0.26
HLA-F-220ENST00000434407 CCDC120Q96HB5 630 aa16.69■□□□□ 0.26
HLA-F-220ENST00000434407 PSMG3-AS1Q96PY0 264 aa16.69■□□□□ 0.26
HLA-F-220ENST00000434407 SAP130Q9H0E3 1048 aa16.69■□□□□ 0.26
HLA-F-220ENST00000434407 TP63Q9H3D4 680 aaPredicted RBP16.69■□□□□ 0.26
HLA-F-220ENST00000434407 EXO5Q9H790 373 aa16.69■□□□□ 0.26
HLA-F-220ENST00000434407 POLE3Q9NRF9 147 aa16.69■□□□□ 0.26
HLA-F-220ENST00000434407 PNPLA3Q9NST1 481 aa16.69■□□□□ 0.26
HLA-F-220ENST00000434407 MED11Q9P086 117 aa16.69■□□□□ 0.26
HLA-F-220ENST00000434407 SH3BGRL2Q9UJC5 107 aa16.69■□□□□ 0.26
HLA-F-220ENST00000434407 ACAD8Q9UKU7 415 aa16.69■□□□□ 0.26
HLA-F-220ENST00000434407 PCDHB14Q9Y5E9 798 aa16.69■□□□□ 0.26
HLA-F-220ENST00000434407 A0A096LPI6 279 aa16.68■□□□□ 0.26
HLA-F-220ENST00000434407 SCDO00767 359 aa16.68■□□□□ 0.26
HLA-F-220ENST00000434407 NDUFB5O43674 189 aa16.68■□□□□ 0.26
HLA-F-220ENST00000434407 FCMRO60667 390 aa16.68■□□□□ 0.26
HLA-F-220ENST00000434407 STX11O75558 287 aa16.68■□□□□ 0.26
HLA-F-220ENST00000434407 BMP7P18075 431 aa16.68■□□□□ 0.26
HLA-F-220ENST00000434407 DPP4P27487 766 aa16.68■□□□□ 0.26
HLA-F-220ENST00000434407 DCTP40126 519 aa16.68■□□□□ 0.26
HLA-F-220ENST00000434407 GFRA1P56159 465 aa16.68■□□□□ 0.26
HLA-F-220ENST00000434407 STX5Q13190 355 aa16.68■□□□□ 0.26
HLA-F-220ENST00000434407 ZNF141Q15928 474 aa16.68■□□□□ 0.26
HLA-F-220ENST00000434407 GTDC1Q4AE62 458 aa16.68■□□□□ 0.26
HLA-F-220ENST00000434407 FLYWCH1Q4VC44 716 aa16.68■□□□□ 0.26
HLA-F-220ENST00000434407 COX20Q5RI15 118 aa16.68■□□□□ 0.26
HLA-F-220ENST00000434407 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.68■□□□□ 0.26
HLA-F-220ENST00000434407 ATAD3BQ5T9A4 648 aa16.68■□□□□ 0.26
HLA-F-220ENST00000434407 SLC2A7Q6PXP3 512 aa16.68■□□□□ 0.26
HLA-F-220ENST00000434407 EID3Q8N140 333 aa16.68■□□□□ 0.26
HLA-F-220ENST00000434407 TSPEARQ8WU66 669 aa16.68■□□□□ 0.26
HLA-F-220ENST00000434407 OIT3Q8WWZ8 545 aa16.68■□□□□ 0.26
HLA-F-220ENST00000434407 RAB8BQ92930 207 aa16.68■□□□□ 0.26
HLA-F-220ENST00000434407 C1GALT1C1Q96EU7 318 aa16.68■□□□□ 0.26
HLA-F-220ENST00000434407 TIMP4Q99727 224 aa16.68■□□□□ 0.26
HLA-F-220ENST00000434407 TPT1P8Q9HAU6 139 aa16.68■□□□□ 0.26
HLA-F-220ENST00000434407 FAM53CQ9NYF3 392 aa16.68■□□□□ 0.26
HLA-F-220ENST00000434407 TAS2R10Q9NYW0 307 aa16.68■□□□□ 0.26
HLA-F-220ENST00000434407 TNFRSF10DQ9UBN6 386 aa16.68■□□□□ 0.26
HLA-F-220ENST00000434407 SLC6A5Q9Y345 797 aa16.68■□□□□ 0.26
HLA-F-220ENST00000434407 GMEB1Q9Y692 573 aa16.68■□□□□ 0.26
HLA-F-220ENST00000434407 DOCK7Q96N67 2140 aa16.67■□□□□ 0.26
HLA-F-220ENST00000434407 INTS1Q8N201 2190 aaKnown RBP16.67■□□□□ 0.26
HLA-F-220ENST00000434407 NPIPA5A0A0B4J1W7 369 aa16.67■□□□□ 0.26
HLA-F-220ENST00000434407 A0A1W2PP18 115 aa16.67■□□□□ 0.26
HLA-F-220ENST00000434407 NPIPA7E9PJI5 369 aa16.67■□□□□ 0.26
HLA-F-220ENST00000434407 NR5A2O00482 541 aa16.67■□□□□ 0.26
HLA-F-220ENST00000434407 ZG16O60844 167 aa16.67■□□□□ 0.26
HLA-F-220ENST00000434407 ACTL6AO96019 429 aa16.67■□□□□ 0.26
HLA-F-220ENST00000434407 HOXD4P09016 255 aaPredicted RBP16.67■□□□□ 0.26
HLA-F-220ENST00000434407 NPIPA8P0DM63 369 aa16.67■□□□□ 0.26
HLA-F-220ENST00000434407 HPGDP15428 266 aa16.67■□□□□ 0.26
HLA-F-220ENST00000434407 MSX1P28360 303 aa16.67■□□□□ 0.26
HLA-F-220ENST00000434407 ANXA11P50995 505 aaKnown RBP16.67■□□□□ 0.26
HLA-F-220ENST00000434407 ARFIP2P53365 341 aa16.67■□□□□ 0.26
HLA-F-220ENST00000434407 B3GALT5-AS1P59052 145 aa16.67■□□□□ 0.26
HLA-F-220ENST00000434407 ADORA2A-AS1P86434 159 aa16.67■□□□□ 0.26
HLA-F-220ENST00000434407 TOMM20Q15388 145 aa16.67■□□□□ 0.26
HLA-F-220ENST00000434407 CD226Q15762 336 aa16.67■□□□□ 0.26
HLA-F-220ENST00000434407 PAGE3Q5JUK9 113 aa16.67■□□□□ 0.26
HLA-F-220ENST00000434407 C6orf10Q5SRN2 563 aa16.67■□□□□ 0.26
HLA-F-220ENST00000434407 WLSQ5T9L3 541 aa16.67■□□□□ 0.26
HLA-F-220ENST00000434407 DNAJC14Q6Y2X3 702 aaPredicted RBP16.67■□□□□ 0.26
HLA-F-220ENST00000434407 C16orf62Q7Z3J2 963 aa16.67■□□□□ 0.26
HLA-F-220ENST00000434407 ZNF527Q8NB42 609 aa16.67■□□□□ 0.26
HLA-F-220ENST00000434407 OR5M9Q8NGP3 310 aa16.67■□□□□ 0.26
HLA-F-220ENST00000434407 ABTB1Q969K4 478 aaPredicted RBP16.67■□□□□ 0.26
HLA-F-220ENST00000434407 ROPN1LQ96C74 230 aa16.67■□□□□ 0.26
HLA-F-220ENST00000434407 TRNT1Q96Q11 434 aaKnown RBP16.67■□□□□ 0.26
HLA-F-220ENST00000434407 UGT2B28Q9BY64 529 aa16.67■□□□□ 0.26
HLA-F-220ENST00000434407 PRDM14Q9GZV8 571 aa16.67■□□□□ 0.26
HLA-F-220ENST00000434407 OCEL1Q9H607 264 aa16.67■□□□□ 0.26
HLA-F-220ENST00000434407 KLHL14Q9P2G3 628 aa16.67■□□□□ 0.26
HLA-F-220ENST00000434407 SUCOQ9UBS9 1254 aaKnown RBP16.67■□□□□ 0.26
HLA-F-220ENST00000434407 KCNE5Q9UJ90 142 aa16.67■□□□□ 0.26
HLA-F-220ENST00000434407 LIPT1Q9Y234 373 aa16.67■□□□□ 0.26
HLA-F-220ENST00000434407 DTNAQ9Y4J8 743 aa16.67■□□□□ 0.26
HLA-F-220ENST00000434407 MED12LQ86YW9 2145 aa16.66■□□□□ 0.26
HLA-F-220ENST00000434407 TRBV5-3A0A0A0MS03 114 aa16.66■□□□□ 0.26
HLA-F-220ENST00000434407 C15orf38-AP3S2A0A0A6YYH1 394 aa16.66■□□□□ 0.26
HLA-F-220ENST00000434407 FIGNL2A6NMB9 653 aa16.66■□□□□ 0.26
HLA-F-220ENST00000434407 KIAA0513O60268 411 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms