RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 GPR68Q15743 365 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 ZNF404Q494X3 552 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 SYT14P1Q58G82 188 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 NKAIN2Q5VXU1 208 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 PEAR1Q5VY43 1037 aaPredicted RBP11.09□□□□□ -0.63
CTCFL-209ENST00000433949 MBOAT2Q6ZWT7 520 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 ZBTB46Q86UZ6 589 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 RNF113BQ8IZP6 322 aaKnown RBP11.09□□□□□ -0.63
CTCFL-209ENST00000433949 SDR16C5Q8N3Y7 309 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 EID2Q8N6I1 236 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 CLDN22Q8N7P3 220 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 Q8N9G6 341 aaPredicted RBP11.09□□□□□ -0.63
CTCFL-209ENST00000433949 PRSS33Q8NF86 280 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 OR5T3Q8NGG3 340 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 B4GALNT2Q8NHY0 566 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 MCFD2Q8NI22 146 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 TMEM163Q8TC26 289 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 SAP25Q8TEE9 199 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 HOXB13Q92826 284 aaPredicted RBP11.09□□□□□ -0.63
CTCFL-209ENST00000433949 TCTN2Q96GX1 697 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 LRR1Q96L50 414 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 SLC38A3Q99624 504 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 ZBTB20Q9HC78 741 aaPredicted RBP11.09□□□□□ -0.63
CTCFL-209ENST00000433949 MED17Q9NVC6 651 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 MRPS18AQ9NVS2 196 aaKnown RBP11.09□□□□□ -0.63
CTCFL-209ENST00000433949 IL20Q9NYY1 176 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 CCDC59Q9P031 241 aaKnown RBP11.09□□□□□ -0.63
CTCFL-209ENST00000433949 DIMT1Q9UNQ2 313 aaKnown RBP11.09□□□□□ -0.63
CTCFL-209ENST00000433949 PCDHGA3Q9Y5H0 932 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 AGRPO00253 132 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 PRODHO43272 600 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 PFDN1O60925 122 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 CBFA2T3O75081 653 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 RNH1P13489 461 aaKnown RBP11.09□□□□□ -0.63
CTCFL-209ENST00000433949 CAPZBP47756 277 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 POU6F2P78424 691 aaPredicted RBP11.09□□□□□ -0.63
CTCFL-209ENST00000433949 ID2Q02363 134 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 RAB40BQ12829 278 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 MAP4K2Q12851 820 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 FAM53BQ14153 422 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 RGS21Q2M5E4 152 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 PRTGQ2VWP7 1150 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 ANKDD1AQ495B1 522 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 ACSM5Q6NUN0 579 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 PRICKLE2Q7Z3G6 844 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 GDF7Q7Z4P5 450 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 MCATQ8IVS2 390 aaKnown RBP11.09□□□□□ -0.63
CTCFL-209ENST00000433949 SLC35F3Q8IY50 421 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 SLC34A3Q8N130 599 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 VWA5B2Q8N398 1253 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 ARHGEF39Q8N4T4 335 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 OR9Q1Q8NGQ5 310 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 GPR151Q8TDV0 419 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 ATOH1Q92858 354 aaPredicted RBP11.09□□□□□ -0.63
CTCFL-209ENST00000433949 ANKRD9Q96BM1 317 aaPredicted RBP11.09□□□□□ -0.63
CTCFL-209ENST00000433949 OR5M11Q96RB7 305 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 GPA33Q99795 319 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 TAPBPLQ9BX59 468 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 FAM60AQ9NP50 221 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 C14orf105Q9NVL8 296 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 LRIT1Q9P2V4 623 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 CORINQ9Y5Q5 1042 aa11.09□□□□□ -0.63
CTCFL-209ENST00000433949 ARID1BQ8NFD5 2236 aaPredicted RBP11.09□□□□□ -0.63
CTCFL-209ENST00000433949 SPTBP11277 2137 aa11.08□□□□□ -0.63
CTCFL-209ENST00000433949 TP53BP1Q12888 1972 aaPredicted RBP11.08□□□□□ -0.64
CTCFL-209ENST00000433949 CPED1A4D0V7 1026 aa11.08□□□□□ -0.64
CTCFL-209ENST00000433949 TRAPPC13A5PLN9 417 aa11.08□□□□□ -0.64
CTCFL-209ENST00000433949 ANKRD33BA6NCL7 494 aa11.08□□□□□ -0.64
CTCFL-209ENST00000433949 RHPN2P1A8MT19 583 aa11.08□□□□□ -0.64
CTCFL-209ENST00000433949 J3QRK9 145 aa11.08□□□□□ -0.64
CTCFL-209ENST00000433949 SGK494L7N484 410 aa11.08□□□□□ -0.64
CTCFL-209ENST00000433949 MYL12BO14950 172 aa11.08□□□□□ -0.64
CTCFL-209ENST00000433949 OR10H2O60403 315 aa11.08□□□□□ -0.64
CTCFL-209ENST00000433949 BRINP1O60477 761 aa11.08□□□□□ -0.64
CTCFL-209ENST00000433949 RDH16O75452 317 aa11.08□□□□□ -0.64
CTCFL-209ENST00000433949 NKX2-2O95096 273 aa11.08□□□□□ -0.64
CTCFL-209ENST00000433949 RAB36O95755 333 aa11.08□□□□□ -0.64
CTCFL-209ENST00000433949 SYPP08247 313 aa11.08□□□□□ -0.64
CTCFL-209ENST00000433949 ENDOUP21128 410 aaKnown RBP11.08□□□□□ -0.64
CTCFL-209ENST00000433949 HOXD12P35452 270 aa11.08□□□□□ -0.64
CTCFL-209ENST00000433949 IDUAP35475 653 aa11.08□□□□□ -0.64
CTCFL-209ENST00000433949 MGAT2Q10469 447 aa11.08□□□□□ -0.64
CTCFL-209ENST00000433949 ZNHIT3Q15649 155 aaPredicted RBP11.08□□□□□ -0.64
CTCFL-209ENST00000433949 AMZ1Q400G9 498 aa11.08□□□□□ -0.64
CTCFL-209ENST00000433949 GARNL3Q5VVW2 1013 aa11.08□□□□□ -0.64
CTCFL-209ENST00000433949 TUBA3EQ6PEY2 450 aa11.08□□□□□ -0.64
CTCFL-209ENST00000433949 IGFN1Q86VF2 1251 aa11.08□□□□□ -0.64
CTCFL-209ENST00000433949 KIF18BQ86Y91 864 aa11.08□□□□□ -0.64
CTCFL-209ENST00000433949 ZNF595Q8IYB9 648 aa11.08□□□□□ -0.64
CTCFL-209ENST00000433949 IQCF1Q8N6M8 205 aa11.08□□□□□ -0.64
CTCFL-209ENST00000433949 NANOGP1Q8N7R0 232 aa11.08□□□□□ -0.64
CTCFL-209ENST00000433949 TMEM52Q8NDY8 209 aa11.08□□□□□ -0.64
CTCFL-209ENST00000433949 CHPT1Q8WUD6 406 aa11.08□□□□□ -0.64
CTCFL-209ENST00000433949 FGF11Q92914 225 aa11.08□□□□□ -0.64
CTCFL-209ENST00000433949 RFKQ969G6 155 aa11.08□□□□□ -0.64
CTCFL-209ENST00000433949 FAM46AQ96IP4 442 aaKnown RBP11.08□□□□□ -0.64
CTCFL-209ENST00000433949 ZNF582Q96NG8 517 aaPredicted RBP11.08□□□□□ -0.64
CTCFL-209ENST00000433949 RXFP3Q9NSD7 469 aa11.08□□□□□ -0.64
CTCFL-209ENST00000433949 CHCHD3Q9NX63 227 aaKnown RBP11.08□□□□□ -0.64
CTCFL-209ENST00000433949 GALNT8Q9NY28 637 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms