RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 MAT2BQ9NZL9 334 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 EMC3Q9P0I2 261 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 MBD1Q9UIS9 605 aaPredicted RBP7.55□□□□□ -1.2
VTI1A-202ENST00000432306 ADAM30Q9UKF2 790 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 ING4Q9UNL4 249 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 ACTL7AQ9Y615 435 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 MYO16Q9Y6X6 1858 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 EP300Q09472 2414 aaPredicted RBP7.55□□□□□ -1.2
VTI1A-202ENST00000432306 PRAMEF33A0A0G2JMD5 474 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 A0A1B0GVI7 797 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 SLC9A3R1O14745 358 aaPredicted RBP7.55□□□□□ -1.2
VTI1A-202ENST00000432306 SYN3O14994 580 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 PRAMEF10O60809 474 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 KCNJ13O60928 360 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 PRAMEF12O95522 483 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 CPSF4O95639 269 aaKnown RBP7.55□□□□□ -1.2
VTI1A-202ENST00000432306 IFNW1P05000 195 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 OR56A5P0C7T3 313 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 NR2F6P10588 404 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 TNNI3P19429 210 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 PTAFRP25105 342 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 APEX1P27695 318 aaKnown RBP7.55□□□□□ -1.2
VTI1A-202ENST00000432306 EVI2BP34910 448 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 BDKRB1P46663 353 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 ATP12AP54707 1039 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 PFN3P60673 137 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 CDK6Q00534 326 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 DSC1Q08554 894 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 ACSM2AQ08AH3 577 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 HEPACAMQ14CZ8 416 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 ARHGAP15Q53QZ3 475 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 C10orf120Q5SQS8 335 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 LIPKQ5VXJ0 399 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 ACSM2BQ68CK6 577 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 CNIH2Q6PI25 160 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 TMEM65Q6PI78 240 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 CEACAM20Q6UY09 585 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 ADAMTSL4Q6UY14 1074 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 PRSS42Q7Z5A4 293 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 PDZD3Q86UT5 571 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 ADGRF3Q8IZF5 1079 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 ZNF366Q8N895 744 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 OR52I1Q8NGK6 324 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 HUS1BQ8NHY5 278 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 MR1Q95460 341 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 MAL2Q969L2 176 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 MTFMTQ96DP5 389 aaKnown RBP7.55□□□□□ -1.2
VTI1A-202ENST00000432306 WBP1Q96G27 269 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 PDXPQ96GD0 296 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 FER1L6-AS2Q96M78 137 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 TEFMQ96QE5 360 aaKnown RBP7.55□□□□□ -1.2
VTI1A-202ENST00000432306 OR2M2Q96R28 347 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 COPS8Q99627 209 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 ATF6BQ99941 703 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 TSSK6Q9BXA6 273 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 B3GAT2Q9NPZ5 323 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 TAS2R7Q9NYW3 318 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 CLEC1BQ9P126 229 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 NLKQ9UBE8 527 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 ICKQ9UPZ9 632 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 EXO1Q9UQ84 846 aaKnown RBP7.55□□□□□ -1.2
VTI1A-202ENST00000432306 ANGPT4Q9Y264 503 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 RPH3AQ9Y2J0 694 aaPredicted RBP7.55□□□□□ -1.2
VTI1A-202ENST00000432306 EXOSC1Q9Y3B2 195 aaKnown RBP7.55□□□□□ -1.2
VTI1A-202ENST00000432306 NPTNQ9Y639 398 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 CLCA3PQ9Y6N3 262 aa7.55□□□□□ -1.2
VTI1A-202ENST00000432306 GLYATL1P3A0A0U1RQE8 302 aa7.54□□□□□ -1.2
VTI1A-202ENST00000432306 M0R129 80 aa7.54□□□□□ -1.2
VTI1A-202ENST00000432306 FFAR1O14842 300 aa7.54□□□□□ -1.2
VTI1A-202ENST00000432306 FABP7O15540 132 aa7.54□□□□□ -1.2
VTI1A-202ENST00000432306 NDUFA2O43678 99 aa7.54□□□□□ -1.2
VTI1A-202ENST00000432306 AP2A2O94973 939 aa7.54□□□□□ -1.2
VTI1A-202ENST00000432306 NFATC1O95644 943 aa7.54□□□□□ -1.2
VTI1A-202ENST00000432306 FHP07954 510 aa7.54□□□□□ -1.2
VTI1A-202ENST00000432306 RHOCP08134 193 aa7.54□□□□□ -1.2
VTI1A-202ENST00000432306 HIST1H2AGP0C0S8 130 aaPredicted RBP7.54□□□□□ -1.2
VTI1A-202ENST00000432306 CLEC2LP0C7M8 214 aa7.54□□□□□ -1.2
VTI1A-202ENST00000432306 LINC00271P0C7V0 271 aa7.54□□□□□ -1.2
VTI1A-202ENST00000432306 HPGDP15428 266 aa7.54□□□□□ -1.2
VTI1A-202ENST00000432306 CD22P20273 847 aa7.54□□□□□ -1.2
VTI1A-202ENST00000432306 HIST1H2ADP20671 130 aa7.54□□□□□ -1.2
VTI1A-202ENST00000432306 TIA1P31483 386 aaKnown RBP eCLIP7.54□□□□□ -1.2
VTI1A-202ENST00000432306 PTGS2P35354 604 aa7.54□□□□□ -1.2
VTI1A-202ENST00000432306 SPAM1P38567 509 aa7.54□□□□□ -1.2
VTI1A-202ENST00000432306 TGM4P49221 684 aa7.54□□□□□ -1.2
VTI1A-202ENST00000432306 SLC11A2P49281 568 aa7.54□□□□□ -1.2
VTI1A-202ENST00000432306 SMIM11AP58511 58 aa7.54□□□□□ -1.2
VTI1A-202ENST00000432306 FAM189BP81408 668 aa7.54□□□□□ -1.2
VTI1A-202ENST00000432306 SHC2P98077 582 aa7.54□□□□□ -1.2
VTI1A-202ENST00000432306 BDH1Q02338 343 aa7.54□□□□□ -1.2
VTI1A-202ENST00000432306 TNP2Q05952 138 aa7.54□□□□□ -1.2
VTI1A-202ENST00000432306 MEP1BQ16820 701 aa7.54□□□□□ -1.2
VTI1A-202ENST00000432306 PRSS53Q2L4Q9 553 aa7.54□□□□□ -1.2
VTI1A-202ENST00000432306 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.54□□□□□ -1.2
VTI1A-202ENST00000432306 ARMC12Q5T9G4 340 aa7.54□□□□□ -1.2
VTI1A-202ENST00000432306 MBNL2Q5VZF2 373 aaKnown RBP7.54□□□□□ -1.2
VTI1A-202ENST00000432306 C22orf42Q6IC83 251 aa7.54□□□□□ -1.2
VTI1A-202ENST00000432306 ANKRD54Q6NXT1 300 aa7.54□□□□□ -1.2
VTI1A-202ENST00000432306 ANKRD12Q6UB98 2062 aa7.54□□□□□ -1.2
VTI1A-202ENST00000432306 CASP12Q6UXS9 341 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms