RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 TMEM52Q8NDY8 209 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 OR9Q1Q8NGQ5 310 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 OR2I1PQ8NGU4 316 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 MCFD2Q8NI22 146 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 HOXB13Q92826 284 aaPredicted RBP11.92□□□□□ -0.5
DDX56-204ENST00000431640 RFKQ969G6 155 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 RBM18Q96H35 190 aaKnown RBP11.92□□□□□ -0.5
DDX56-204ENST00000431640 COX4I2Q96KJ9 171 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 LRR1Q96L50 414 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 ZNF578Q96N58 590 aaPredicted RBP11.92□□□□□ -0.5
DDX56-204ENST00000431640 ZNF582Q96NG8 517 aaPredicted RBP11.92□□□□□ -0.5
DDX56-204ENST00000431640 SLC38A3Q99624 504 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 GPA33Q99795 319 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 PRR14Q9BWN1 585 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 SLIRPQ9GZT3 109 aaKnown RBP11.92□□□□□ -0.5
DDX56-204ENST00000431640 SIAEQ9HAT2 523 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 C14orf105Q9NVL8 296 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 ETAA1Q9NY74 926 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 IL20Q9NYY1 176 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 EPHA6Q9UF33 1036 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 CUL9Q8IWT3 2517 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 SPEGQ15772 3267 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 GPR179Q6PRD1 2367 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 ANKRD33BA6NCL7 494 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 TTC36A6NLP5 189 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 FRS3O43559 492 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 KIAA0513O60268 411 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 BRINP1O60477 761 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 CBFA2T3O75081 653 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 RDH16O75452 317 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 PROS1P07225 676 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 SOX6P35712 828 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 LIMK1P53667 647 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 ITGADQ13349 1161 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 TSTQ16762 297 aaKnown RBP11.92□□□□□ -0.5
DDX56-204ENST00000431640 RGS21Q2M5E4 152 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 TCEAL6Q6IPX3 200 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 NKAIN4Q8IVV8 208 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 CDK20Q8IZL9 346 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 VWA5B2Q8N398 1253 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 ARHGEF39Q8N4T4 335 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 IQCF1Q8N6M8 205 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 OR6C4Q8NGE1 309 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 OR9A4Q8NGU2 314 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 FGF11Q92914 225 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 TCEAL3Q969E4 200 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 FAM46AQ96IP4 442 aaKnown RBP11.92□□□□□ -0.5
DDX56-204ENST00000431640 OR5M11Q96RB7 305 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 CHRNA10Q9GZZ6 450 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 CAPN10Q9HC96 672 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 FGF20Q9NP95 211 aaPredicted RBP11.92□□□□□ -0.5
DDX56-204ENST00000431640 STARD5Q9NSY2 213 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 CCDC59Q9P031 241 aaKnown RBP11.92□□□□□ -0.5
DDX56-204ENST00000431640 TESQ9UGI8 421 aaKnown RBP11.92□□□□□ -0.5
DDX56-204ENST00000431640 PLCL2Q9UPR0 1127 aa11.92□□□□□ -0.5
DDX56-204ENST00000431640 KPNA4O00629 521 aaPredicted RBP11.91□□□□□ -0.5
DDX56-204ENST00000431640 MYL12BO14950 172 aa11.91□□□□□ -0.5
DDX56-204ENST00000431640 KLF4O43474 513 aa11.91□□□□□ -0.5
DDX56-204ENST00000431640 NSA2O95478 260 aaKnown RBP11.91□□□□□ -0.5
DDX56-204ENST00000431640 GIMD1P0DJR0 217 aa11.91□□□□□ -0.5
DDX56-204ENST00000431640 MYL12AP19105 171 aa11.91□□□□□ -0.5
DDX56-204ENST00000431640 PSMA1P25786 263 aaKnown RBP11.91□□□□□ -0.5
DDX56-204ENST00000431640 CAPZBP47756 277 aa11.91□□□□□ -0.5
DDX56-204ENST00000431640 ZNF136P52737 540 aa11.91□□□□□ -0.5
DDX56-204ENST00000431640 PPP1CAP62136 330 aa11.91□□□□□ -0.5
DDX56-204ENST00000431640 STX4Q12846 297 aa11.91□□□□□ -0.5
DDX56-204ENST00000431640 MLLT11Q13015 90 aaPredicted RBP11.91□□□□□ -0.5
DDX56-204ENST00000431640 ANKDD1AQ495B1 522 aa11.91□□□□□ -0.5
DDX56-204ENST00000431640 C3orf38Q5JPI3 329 aa11.91□□□□□ -0.5
DDX56-204ENST00000431640 TCTE1Q5JU00 501 aa11.91□□□□□ -0.5
DDX56-204ENST00000431640 KANSL1Q7Z3B3 1105 aa11.91□□□□□ -0.5
DDX56-204ENST00000431640 IGFN1Q86VF2 1251 aa11.91□□□□□ -0.5
DDX56-204ENST00000431640 GALNT12Q8IXK2 581 aa11.91□□□□□ -0.5
DDX56-204ENST00000431640 SIMC1Q8NDZ2 872 aa11.91□□□□□ -0.5
DDX56-204ENST00000431640 C7orf57Q8NEG2 295 aa11.91□□□□□ -0.5
DDX56-204ENST00000431640 B4GALNT2Q8NHY0 566 aa11.91□□□□□ -0.5
DDX56-204ENST00000431640 LMX1AQ8TE12 382 aa11.91□□□□□ -0.5
DDX56-204ENST00000431640 CHPT1Q8WUD6 406 aa11.91□□□□□ -0.5
DDX56-204ENST00000431640 SLC35B4Q969S0 331 aa11.91□□□□□ -0.5
DDX56-204ENST00000431640 HS6ST2Q96MM7 605 aa11.91□□□□□ -0.5
DDX56-204ENST00000431640 ZNF559Q9BR84 538 aa11.91□□□□□ -0.5
DDX56-204ENST00000431640 LMF2Q9BU23 707 aaKnown RBP11.91□□□□□ -0.5
DDX56-204ENST00000431640 TAPBPLQ9BX59 468 aa11.91□□□□□ -0.5
DDX56-204ENST00000431640 NXF2Q9GZY0 626 aaKnown RBP11.91□□□□□ -0.5
DDX56-204ENST00000431640 RAB33BQ9H082 229 aa11.91□□□□□ -0.5
DDX56-204ENST00000431640 OR51E2Q9H255 320 aa11.91□□□□□ -0.5
DDX56-204ENST00000431640 EGLN3Q9H6Z9 239 aa11.91□□□□□ -0.5
DDX56-204ENST00000431640 ISYNA1Q9NPH2 558 aa11.91□□□□□ -0.5
DDX56-204ENST00000431640 FAIMQ9NVQ4 179 aa11.91□□□□□ -0.5
DDX56-204ENST00000431640 SEC14L4Q9UDX3 406 aa11.91□□□□□ -0.5
DDX56-204ENST00000431640 SLC7A7Q9UM01 511 aa11.91□□□□□ -0.5
DDX56-204ENST00000431640 LSM2Q9Y333 95 aaKnown RBP11.91□□□□□ -0.5
DDX56-204ENST00000431640 CORINQ9Y5Q5 1042 aa11.91□□□□□ -0.5
DDX56-204ENST00000431640 PMF1-BGLAPU3KQ54 211 aa11.91□□□□□ -0.5
DDX56-204ENST00000431640 KNL1Q8NG31 2342 aa11.9□□□□□ -0.5
DDX56-204ENST00000431640 LOC100506127A0A0U1RQW1 187 aa11.9□□□□□ -0.5
DDX56-204ENST00000431640 CDHR4A6H8M9 788 aa11.9□□□□□ -0.5
DDX56-204ENST00000431640 METTL15A6NJ78 407 aa11.9□□□□□ -0.5
DDX56-204ENST00000431640 KDM4EB2RXH2 506 aaPredicted RBP11.9□□□□□ -0.5
DDX56-204ENST00000431640 J3QRK9 145 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms