RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 DNAJA3Q96EY1 480 aa2.48□□□□□ -2.01
HMGB1P27-201ENST00000431429 HPDLQ96IR7 371 aa2.48□□□□□ -2.01
HMGB1P27-201ENST00000431429 COMMD4Q9H0A8 199 aa2.48□□□□□ -2.01
HMGB1P27-201ENST00000431429 ZBP1Q9H171 429 aa2.48□□□□□ -2.01
HMGB1P27-201ENST00000431429 PANK3Q9H999 370 aa2.48□□□□□ -2.01
HMGB1P27-201ENST00000431429 MEPEQ9NQ76 525 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P27-201ENST00000431429 FAM120CQ9NX05 1096 aaKnown RBP2.48□□□□□ -2.01
HMGB1P27-201ENST00000431429 CYTH4Q9UIA0 394 aa2.48□□□□□ -2.01
HMGB1P27-201ENST00000431429 MGAT4AQ9UM21 535 aa2.48□□□□□ -2.01
HMGB1P27-201ENST00000431429 SLC9A8Q9Y2E8 581 aa2.48□□□□□ -2.01
HMGB1P27-201ENST00000431429 AUP1Q9Y679 476 aa2.48□□□□□ -2.01
HMGB1P27-201ENST00000431429 HFM1A2PYH4 1435 aa2.48□□□□□ -2.01
HMGB1P27-201ENST00000431429 CCDC144AA2RUR9 1427 aa2.48□□□□□ -2.01
HMGB1P27-201ENST00000431429 ADAMTS13Q76LX8 1427 aa2.48□□□□□ -2.01
HMGB1P27-201ENST00000431429 ERBINQ96RT1 1412 aa2.48□□□□□ -2.01
HMGB1P27-201ENST00000431429 ADGRB2O60241 1585 aa2.48□□□□□ -2.01
HMGB1P27-201ENST00000431429 MAST1Q9Y2H9 1570 aa2.48□□□□□ -2.01
HMGB1P27-201ENST00000431429 SBNO1A3KN83 1393 aa2.48□□□□□ -2.01
HMGB1P27-201ENST00000431429 ANKRD30BQ9BXX2 1392 aa2.48□□□□□ -2.01
HMGB1P27-201ENST00000431429 ANKRD30AQ9BXX3 1397 aa2.48□□□□□ -2.01
HMGB1P27-201ENST00000431429 DLC1Q96QB1 1528 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 ADGRL2O95490 1459 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 PPIAL4CA0A0B4J2A2 164 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 A0A0J9YVX5 310 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 TRBV7-9A0A0J9YWB2 115 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 A0A0J9YWU9 116 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 MBLAC1A4D2B0 266 aaPredicted RBP2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 SRRM5B3KS81 715 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 PPIAL4DF5H284 164 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 ZSCAN12O43309 604 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 DUX1O43812 170 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 B3GAT3O94766 335 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 PRAMEF12O95522 483 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 NUDT14O95848 222 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 JCHAINP01591 159 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 IGF1P05019 195 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 PPIAL4GP0DN37 164 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 EPB41P11171 864 aaKnown RBP2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 BCKDHAP12694 445 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 CALML3P27482 149 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 PPP2R1BP30154 601 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 RPL4P36578 427 aaKnown RBP2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 PTGER3P43115 390 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 OR1D4P47884 311 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 ERVK11-1P61568 191 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 NOP14P78316 857 aaKnown RBP2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 CSTF1Q05048 431 aaKnown RBP2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 BNIP1Q12981 228 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 GPM6BQ13491 265 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 EIF2B1Q14232 305 aaKnown RBP2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 LTB4RQ15722 352 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 ZIC1Q15915 447 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 RABGAP1LQ5R372 815 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 CELF3Q5SZQ8 465 aaKnown RBP2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 FAM120AOSQ5T036 256 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 REG3GQ6UW15 175 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 APOOLQ6UXV4 268 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 ZNF841Q6ZN19 808 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 TMUB2Q71RG4 321 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 Q7L0L9 218 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 PRSS48Q7RTY5 328 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 PARGQ86W56 976 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 HSCBQ8IWL3 235 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 CENPSQ8N2Z9 138 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 FBXO30Q8TB52 745 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 RAET1EQ8TD07 263 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 SPRYD4Q8WW59 207 aaPredicted RBP2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 ITLN1Q8WWA0 313 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 FAM3CQ92520 227 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 THRSPQ92748 146 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 RAB3CQ96E17 227 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 PIWIL1Q96J94 861 aaKnown RBP2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 C1orf147Q96MC9 270 aaPredicted RBP2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 C9orf85Q96MD7 179 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 IWS1Q96ST2 819 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 VGLL1Q99990 258 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 TRIM51Q9BSJ1 452 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 TMEM121Q9BTD3 319 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 ZSCAN5AQ9BUG6 496 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 TEX13BQ9BXU2 312 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 TRIM6Q9C030 488 aaPredicted RBP2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 HEXA-AS1Q9H8Q6 139 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 SP140LQ9H930 580 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 FARSBQ9NSD9 589 aaKnown RBP2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 ABCC13Q9NSE7 274 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 C1orf123Q9NWV4 160 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 RAI14Q9P0K7 980 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 TBK1Q9UHD2 729 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 DUSP12Q9UNI6 340 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 SMC3Q9UQE7 1217 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 CHMP2BQ9UQN3 213 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 RNF24Q9Y225 148 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 GSTK1Q9Y2Q3 226 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 USP16Q9Y5T5 823 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 CEP162Q5TB80 1403 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 MYOM3Q5VTT5 1437 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 ADGRB3O60242 1522 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 DUOX2Q9NRD8 1548 aa2.47□□□□□ -2.01
HMGB1P27-201ENST00000431429 CHD2O14647 1828 aaKnown RBP2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms