RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 SLC6A8P48029 635 aa12.09□□□□□ -0.47
PTCH1-207ENST00000429896 RBPJQ06330 500 aa12.09□□□□□ -0.47
PTCH1-207ENST00000429896 QSOX2Q6ZRP7 698 aa12.09□□□□□ -0.47
PTCH1-207ENST00000429896 SNX29P2Q8IUI4 249 aa12.09□□□□□ -0.47
PTCH1-207ENST00000429896 OR4D9Q8NGE8 314 aa12.09□□□□□ -0.47
PTCH1-207ENST00000429896 CANT1Q8WVQ1 401 aa12.09□□□□□ -0.47
PTCH1-207ENST00000429896 NXPE2Q96DL1 559 aa12.09□□□□□ -0.47
PTCH1-207ENST00000429896 CCDC59Q9P031 241 aaKnown RBP12.09□□□□□ -0.47
PTCH1-207ENST00000429896 C11orf98E9PRG8 122 aa12.09□□□□□ -0.47
PTCH1-207ENST00000429896 GPX3P22352 226 aa12.09□□□□□ -0.47
PTCH1-207ENST00000429896 S100A1P23297 94 aa12.09□□□□□ -0.47
PTCH1-207ENST00000429896 CGB2Q6NT52 195 aa12.09□□□□□ -0.47
PTCH1-207ENST00000429896 METTL25Q8N6Q8 603 aa12.09□□□□□ -0.47
PTCH1-207ENST00000429896 GNPDA2Q8TDQ7 276 aa12.09□□□□□ -0.47
PTCH1-207ENST00000429896 OR10A5Q9H207 317 aa12.09□□□□□ -0.47
PTCH1-207ENST00000429896 ETAA1Q9NY74 926 aa12.09□□□□□ -0.47
PTCH1-207ENST00000429896 ACAD8Q9UKU7 415 aa12.09□□□□□ -0.47
PTCH1-207ENST00000429896 MRPS2Q9Y399 296 aaKnown RBP12.09□□□□□ -0.47
PTCH1-207ENST00000429896 PDLIM1O00151 329 aa12.09□□□□□ -0.47
PTCH1-207ENST00000429896 GALR3O60755 368 aaPredicted RBP12.09□□□□□ -0.47
PTCH1-207ENST00000429896 PLATP00750 562 aa12.09□□□□□ -0.47
PTCH1-207ENST00000429896 APOC1P02654 83 aa12.09□□□□□ -0.47
PTCH1-207ENST00000429896 MTHFD2P13995 350 aa12.09□□□□□ -0.47
PTCH1-207ENST00000429896 RASGEF1BQ0VAM2 473 aa12.09□□□□□ -0.47
PTCH1-207ENST00000429896 RBM48Q5RL73 367 aaKnown RBP12.09□□□□□ -0.47
PTCH1-207ENST00000429896 SLC48A1Q6P1K1 146 aa12.09□□□□□ -0.47
PTCH1-207ENST00000429896 LINC00696Q6ZRV3 163 aa12.09□□□□□ -0.47
PTCH1-207ENST00000429896 SPRED1Q7Z699 444 aa12.09□□□□□ -0.47
PTCH1-207ENST00000429896 LSM14AQ8ND56 463 aaKnown RBP12.09□□□□□ -0.47
PTCH1-207ENST00000429896 OR2T11Q8NH01 316 aa12.09□□□□□ -0.47
PTCH1-207ENST00000429896 EGLN2Q96KS0 407 aa12.09□□□□□ -0.47
PTCH1-207ENST00000429896 HS6ST2Q96MM7 605 aa12.09□□□□□ -0.47
PTCH1-207ENST00000429896 SLC22A7Q9Y694 548 aa12.09□□□□□ -0.47
PTCH1-207ENST00000429896 ARGFXA6NJG6 315 aa12.09□□□□□ -0.47
PTCH1-207ENST00000429896 OR2AT4A6NND4 320 aa12.09□□□□□ -0.47
PTCH1-207ENST00000429896 STMND1H3BQB6 276 aa12.09□□□□□ -0.47
PTCH1-207ENST00000429896 MEN1O00255 615 aa12.09□□□□□ -0.47
PTCH1-207ENST00000429896 HRO43593 1189 aa12.09□□□□□ -0.47
PTCH1-207ENST00000429896 BICRALQ6AI39 1079 aa12.09□□□□□ -0.47
PTCH1-207ENST00000429896 ADNP2Q6IQ32 1131 aa12.09□□□□□ -0.47
PTCH1-207ENST00000429896 PDSS2Q86YH6 399 aa12.09□□□□□ -0.47
PTCH1-207ENST00000429896 UCK2Q9BZX2 261 aa12.09□□□□□ -0.47
PTCH1-207ENST00000429896 SCN5AQ14524 2016 aa12.09□□□□□ -0.47
PTCH1-207ENST00000429896 RAD1O60671 282 aa12.08□□□□□ -0.47
PTCH1-207ENST00000429896 PRKRAO75569 313 aaKnown RBP12.08□□□□□ -0.47
PTCH1-207ENST00000429896 CAPN3P20807 821 aa12.08□□□□□ -0.47
PTCH1-207ENST00000429896 SLC6A6P31641 620 aa12.08□□□□□ -0.47
PTCH1-207ENST00000429896 PSPHP78330 225 aa12.08□□□□□ -0.47
PTCH1-207ENST00000429896 GTDC1Q4AE62 458 aa12.08□□□□□ -0.47
PTCH1-207ENST00000429896 SLC35F1Q5T1Q4 408 aa12.08□□□□□ -0.47
PTCH1-207ENST00000429896 LAS2Q8IYD9 372 aa12.08□□□□□ -0.47
PTCH1-207ENST00000429896 THOC3Q96J01 351 aaKnown RBP12.08□□□□□ -0.47
PTCH1-207ENST00000429896 ADOQ96SZ5 270 aa12.08□□□□□ -0.47
PTCH1-207ENST00000429896 ZNF451Q9Y4E5 1061 aa12.08□□□□□ -0.47
PTCH1-207ENST00000429896 RALGAPA2Q2PPJ7 1873 aa12.08□□□□□ -0.48
PTCH1-207ENST00000429896 KDELR2P33947 212 aa12.08□□□□□ -0.48
PTCH1-207ENST00000429896 DEFA5Q01523 94 aa12.08□□□□□ -0.48
PTCH1-207ENST00000429896 TMEM44Q2T9K0 475 aa12.08□□□□□ -0.48
PTCH1-207ENST00000429896 ARL9Q6T311 187 aa12.08□□□□□ -0.48
PTCH1-207ENST00000429896 P2RY8Q86VZ1 359 aa12.08□□□□□ -0.48
PTCH1-207ENST00000429896 ADGRF3Q8IZF5 1079 aa12.08□□□□□ -0.48
PTCH1-207ENST00000429896 POFUT2Q9Y2G5 429 aa12.08□□□□□ -0.48
PTCH1-207ENST00000429896 PCDHGA6Q9Y5G7 932 aa12.08□□□□□ -0.48
PTCH1-207ENST00000429896 SPINT1O43278 529 aa12.08□□□□□ -0.48
PTCH1-207ENST00000429896 H6PDO95479 791 aa12.08□□□□□ -0.48
PTCH1-207ENST00000429896 UBL4AP11441 157 aa12.08□□□□□ -0.48
PTCH1-207ENST00000429896 ENTPD1P49961 510 aa12.08□□□□□ -0.48
PTCH1-207ENST00000429896 CLRN1P58418 232 aa12.08□□□□□ -0.48
PTCH1-207ENST00000429896 SLC15A3Q8IY34 581 aa12.08□□□□□ -0.48
PTCH1-207ENST00000429896 DNAAF1Q8NEP3 725 aa12.08□□□□□ -0.48
PTCH1-207ENST00000429896 OR5D16Q8NGK9 328 aa12.08□□□□□ -0.48
PTCH1-207ENST00000429896 NODALQ96S42 347 aa12.08□□□□□ -0.48
PTCH1-207ENST00000429896 PLPP1O14494 284 aa12.08□□□□□ -0.48
PTCH1-207ENST00000429896 KLK8O60259 260 aa12.08□□□□□ -0.48
PTCH1-207ENST00000429896 PPM1BO75688 479 aa12.08□□□□□ -0.48
PTCH1-207ENST00000429896 B3GALT4O96024 378 aa12.08□□□□□ -0.48
PTCH1-207ENST00000429896 IL11RAQ14626 422 aa12.08□□□□□ -0.48
PTCH1-207ENST00000429896 RPS26P11Q5JNZ5 115 aaPredicted RBP12.08□□□□□ -0.48
PTCH1-207ENST00000429896 KCTD9Q7L273 389 aa12.08□□□□□ -0.48
PTCH1-207ENST00000429896 TMED4Q7Z7H5 227 aa12.08□□□□□ -0.48
PTCH1-207ENST00000429896 OR7D2Q96RA2 312 aa12.08□□□□□ -0.48
PTCH1-207ENST00000429896 ATG4BQ9Y4P1 393 aa12.08□□□□□ -0.48
PTCH1-207ENST00000429896 OR14I1A6ND48 311 aa12.08□□□□□ -0.48
PTCH1-207ENST00000429896 VSTM5A8MXK1 200 aa12.08□□□□□ -0.48
PTCH1-207ENST00000429896 UBFD1O14562 309 aaKnown RBP12.08□□□□□ -0.48
PTCH1-207ENST00000429896 LCMT2O60294 686 aaKnown RBP12.08□□□□□ -0.48
PTCH1-207ENST00000429896 STPG1Q5TH74 334 aa12.08□□□□□ -0.48
PTCH1-207ENST00000429896 CLDN23Q96B33 292 aa12.08□□□□□ -0.48
PTCH1-207ENST00000429896 LINC00271P0C7V0 271 aa12.08□□□□□ -0.48
PTCH1-207ENST00000429896 ZMYND11Q15326 602 aa12.08□□□□□ -0.48
PTCH1-207ENST00000429896 ZNF547Q8IVP9 402 aa12.08□□□□□ -0.48
PTCH1-207ENST00000429896 ZNF100Q8IYN0 542 aa12.08□□□□□ -0.48
PTCH1-207ENST00000429896 AQP11Q8NBQ7 271 aa12.08□□□□□ -0.48
PTCH1-207ENST00000429896 HSPBAP1Q96EW2 488 aa12.08□□□□□ -0.48
PTCH1-207ENST00000429896 PIP5K1AQ99755 562 aa12.08□□□□□ -0.48
PTCH1-207ENST00000429896 PILRBQ9UKJ0 227 aa12.08□□□□□ -0.48
PTCH1-207ENST00000429896 DAPP1Q9UN19 280 aa12.08□□□□□ -0.48
PTCH1-207ENST00000429896 SLC35A3Q9Y2D2 325 aa12.08□□□□□ -0.48
PTCH1-207ENST00000429896 PRRC2BQ5JSZ5 2229 aaKnown RBP12.07□□□□□ -0.48
PTCH1-207ENST00000429896 CARFQ8N187 725 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms