RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 TMPRSS12Q86WS5 348 aa11.85□□□□□ -0.51
CPNE4-201ENST00000429747 NLGN4YQ8NFZ3 816 aaPredicted RBP11.85□□□□□ -0.51
CPNE4-201ENST00000429747 KXD1Q9BQD3 176 aa11.85□□□□□ -0.51
CPNE4-201ENST00000429747 SRA1Q9HD15 236 aaKnown RBP11.85□□□□□ -0.51
CPNE4-201ENST00000429747 Q9N2J8 555 aa11.85□□□□□ -0.51
CPNE4-201ENST00000429747 NDUFB11Q9NX14 153 aa11.85□□□□□ -0.51
CPNE4-201ENST00000429747 GXYLT2A0PJZ3 443 aa11.85□□□□□ -0.51
CPNE4-201ENST00000429747 TMPRSS11DO60235 418 aa11.85□□□□□ -0.51
CPNE4-201ENST00000429747 CSF3P09919 207 aa11.85□□□□□ -0.51
CPNE4-201ENST00000429747 CHRNB1P11230 501 aa11.85□□□□□ -0.51
CPNE4-201ENST00000429747 RAE1P78406 368 aaKnown RBP11.85□□□□□ -0.51
CPNE4-201ENST00000429747 FCN2Q15485 313 aa11.85□□□□□ -0.51
CPNE4-201ENST00000429747 ALG10BQ5I7T1 473 aa11.85□□□□□ -0.51
CPNE4-201ENST00000429747 ZNF776Q68DI1 518 aaPredicted RBP11.85□□□□□ -0.51
CPNE4-201ENST00000429747 FAM26EQ8N5C1 309 aa11.85□□□□□ -0.51
CPNE4-201ENST00000429747 ARRDC3Q96B67 414 aa11.85□□□□□ -0.51
CPNE4-201ENST00000429747 ALG14Q96F25 216 aa11.85□□□□□ -0.51
CPNE4-201ENST00000429747 KATNB1Q9BVA0 655 aa11.85□□□□□ -0.51
CPNE4-201ENST00000429747 SLC6A14Q9UN76 642 aa11.85□□□□□ -0.51
CPNE4-201ENST00000429747 NAALAD2Q9Y3Q0 740 aa11.85□□□□□ -0.51
CPNE4-201ENST00000429747 ASB4Q9Y574 426 aa11.85□□□□□ -0.51
CPNE4-201ENST00000429747 MT-ND4P03905 459 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 GNALP38405 381 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 PSMB10P40306 273 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 MAP3K8P41279 467 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 ATXN7L3Q14CW9 347 aaPredicted RBP11.84□□□□□ -0.51
CPNE4-201ENST00000429747 SSX1Q16384 188 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 SAXO2Q658L1 398 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 LRRC28Q86X40 367 aaPredicted RBP11.84□□□□□ -0.51
CPNE4-201ENST00000429747 PHOSPHO1Q8TCT1 267 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 OR2A14Q96R47 310 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 SRRQ9GZT4 340 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 EXO5Q9H790 373 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 ELL3Q9HB65 397 aaPredicted RBP11.84□□□□□ -0.51
CPNE4-201ENST00000429747 IL21Q9HBE4 155 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 TRIM64A6NGJ6 449 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 KAT7O95251 611 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 VNN2O95498 520 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 PAHP00439 452 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 DBIP07108 87 aaKnown RBP11.84□□□□□ -0.51
CPNE4-201ENST00000429747 TEKQ02763 1124 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 ASAH1Q13510 395 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 PUM1Q14671 1186 aaKnown RBP eCLIP11.84□□□□□ -0.51
CPNE4-201ENST00000429747 PUS10Q3MIT2 529 aaKnown RBP11.84□□□□□ -0.51
CPNE4-201ENST00000429747 AMZ1Q400G9 498 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 SCGB2B2Q4G0G5 96 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 RPL13AP3Q6NVV1 102 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 KRT77Q7Z794 578 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 PAQR7Q86WK9 346 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 OR52E1Q8NGJ3 308 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 OR6N2Q8NGY6 317 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 HCAR2Q8TDS4 363 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 CREB3L4Q8TEY5 395 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 HMGB4Q8WW32 186 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 SMPDL3BQ92485 455 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 NSMAFQ92636 917 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 MS4A4EQ96PG1 132 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 OR2M4Q96R27 311 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 KLHL31Q9H511 634 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 SH2B3Q9UQQ2 575 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 ATG4BQ9Y4P1 393 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 HEPACAM2A8MVW5 462 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 RENP00797 406 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 ZNF888P0CJ79 500 aaPredicted RBP11.84□□□□□ -0.51
CPNE4-201ENST00000429747 CEBPBP17676 345 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 MLLT3P42568 568 aaPredicted RBP11.84□□□□□ -0.51
CPNE4-201ENST00000429747 FNTBP49356 437 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 VSX2P58304 361 aaPredicted RBP11.84□□□□□ -0.51
CPNE4-201ENST00000429747 SHC2P98077 582 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 CST6Q15828 149 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 LAIR1Q6GTX8 287 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 LAIR2Q6ISS4 152 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 Q6ZNB5 142 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 DOCK3Q8IZD9 2030 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 SDR9C7Q8NEX9 313 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 OR5K2Q8NHB8 316 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 PMEPA1Q969W9 287 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 BPIFA2Q96DR5 249 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 CCDC120Q96HB5 630 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 B3GNT4Q9C0J1 378 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 ARL6Q9H0F7 186 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 SLC25A18Q9H1K4 315 aa11.84□□□□□ -0.51
CPNE4-201ENST00000429747 A0A0G2JMP0 313 aa11.83□□□□□ -0.52
CPNE4-201ENST00000429747 A0A0X1KG70 313 aa11.83□□□□□ -0.52
CPNE4-201ENST00000429747 C17orf113A0A1B0GUU1 675 aa11.83□□□□□ -0.52
CPNE4-201ENST00000429747 MEN1O00255 615 aa11.83□□□□□ -0.52
CPNE4-201ENST00000429747 CSTAP01040 98 aa11.83□□□□□ -0.52
CPNE4-201ENST00000429747 TFPIP10646 304 aa11.83□□□□□ -0.52
CPNE4-201ENST00000429747 SNRPBP14678 240 aaKnown RBP11.83□□□□□ -0.52
CPNE4-201ENST00000429747 SOX18P35713 384 aa11.83□□□□□ -0.52
CPNE4-201ENST00000429747 GZMMP51124 257 aa11.83□□□□□ -0.52
CPNE4-201ENST00000429747 SNTA1Q13424 505 aa11.83□□□□□ -0.52
CPNE4-201ENST00000429747 SLC39A5Q6ZMH5 540 aa11.83□□□□□ -0.52
CPNE4-201ENST00000429747 COMMD7Q86VX2 200 aa11.83□□□□□ -0.52
CPNE4-201ENST00000429747 NKAIN4Q8IVV8 208 aa11.83□□□□□ -0.52
CPNE4-201ENST00000429747 LAS2Q8IYD9 372 aa11.83□□□□□ -0.52
CPNE4-201ENST00000429747 FAM109AQ8N4B1 249 aa11.83□□□□□ -0.52
CPNE4-201ENST00000429747 OR4M2Q8NGB6 313 aa11.83□□□□□ -0.52
CPNE4-201ENST00000429747 C5orf34Q96MH7 638 aa11.83□□□□□ -0.52
CPNE4-201ENST00000429747 SAMD11Q96NU1 681 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms