RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 CA5BQ9Y2D0 317 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 COL4A4P53420 1690 aaPredicted RBP11.66□□□□□ -0.54
CDH3-202ENST00000429102 E9PQ18 207 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 LDB3O75112 727 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 LGI1O95970 557 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 SRPRAP08240 638 aaKnown RBP11.66□□□□□ -0.54
CDH3-202ENST00000429102 ADH5P11766 374 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 CSNK1G2P78368 415 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 MN1Q10571 1320 aaPredicted RBP11.66□□□□□ -0.54
CDH3-202ENST00000429102 TRAM2Q15035 370 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 PSRC1Q6PGN9 363 aaPredicted RBP11.66□□□□□ -0.54
CDH3-202ENST00000429102 BHLHB9Q6PI77 547 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 FBXO15Q8NCQ5 510 aaPredicted RBP11.66□□□□□ -0.54
CDH3-202ENST00000429102 C17orf47Q8NEP4 570 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 OR2L2Q8NH16 312 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 CEP76Q8TAP6 659 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 RFT1Q96AA3 541 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 ZMYND19Q96E35 227 aaPredicted RBP11.66□□□□□ -0.54
CDH3-202ENST00000429102 TMEM43Q9BTV4 400 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 OR52A5Q9H2C5 316 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 TAS2R7Q9NYW3 318 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 SF3B6Q9Y3B4 125 aaKnown RBP11.66□□□□□ -0.54
CDH3-202ENST00000429102 ASGR2P07307 311 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 PRKACBP22694 351 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 ACADLP28330 430 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 CDK5Q00535 292 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 ST3GAL3Q11203 375 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 TMEM91Q6ZNR0 172 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 LRRC56Q8IYG6 542 aaPredicted RBP11.66□□□□□ -0.54
CDH3-202ENST00000429102 OR13C2Q8NGS9 318 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 TRMT10AQ8TBZ6 339 aaKnown RBP11.66□□□□□ -0.54
CDH3-202ENST00000429102 ZFAND1Q8TCF1 268 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 SLC41A3Q96GZ6 507 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 C4orf36Q96KX1 117 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 SLC25A18Q9H1K4 315 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 FN3KQ9H479 309 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 NLGN3Q9NZ94 848 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 NPAP1Q9NZP6 1156 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 DEC1Q9P2X7 70 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 WDR45Q9Y484 360 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 ZNF780BQ9Y6R6 833 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 A0A1B0GVT2 93 aa11.65□□□□□ -0.54
CDH3-202ENST00000429102 OR2W5A6NFC9 320 aa11.65□□□□□ -0.54
CDH3-202ENST00000429102 CHURC1-FNTBB4DL54 471 aa11.65□□□□□ -0.54
CDH3-202ENST00000429102 PRR23D1E9PI22 279 aaPredicted RBP11.65□□□□□ -0.54
CDH3-202ENST00000429102 PRNPP04156 253 aa11.65□□□□□ -0.54
CDH3-202ENST00000429102 PRR23D2P0DMB1 279 aaPredicted RBP11.65□□□□□ -0.54
CDH3-202ENST00000429102 ACADMP11310 421 aa11.65□□□□□ -0.54
CDH3-202ENST00000429102 LAG3P18627 525 aa11.65□□□□□ -0.54
CDH3-202ENST00000429102 TM4SF4P48230 202 aa11.65□□□□□ -0.54
CDH3-202ENST00000429102 PCBP4P57723 403 aaKnown RBP11.65□□□□□ -0.54
CDH3-202ENST00000429102 DGCR2P98153 550 aa11.65□□□□□ -0.54
CDH3-202ENST00000429102 C3orf38Q5JPI3 329 aa11.65□□□□□ -0.54
CDH3-202ENST00000429102 PRPF38BQ5VTL8 546 aaKnown RBP11.65□□□□□ -0.54
CDH3-202ENST00000429102 C1orf94Q6P1W5 598 aa11.65□□□□□ -0.54
CDH3-202ENST00000429102 NATD1Q8N6N6 113 aa11.65□□□□□ -0.54
CDH3-202ENST00000429102 OR8K3Q8NH51 312 aa11.65□□□□□ -0.54
CDH3-202ENST00000429102 GNPDA2Q8TDQ7 276 aa11.65□□□□□ -0.54
CDH3-202ENST00000429102 RASSF5Q8WWW0 418 aa11.65□□□□□ -0.54
CDH3-202ENST00000429102 PPP1R3EQ9H7J1 279 aa11.65□□□□□ -0.54
CDH3-202ENST00000429102 SYNPO2LQ9H987 977 aa11.65□□□□□ -0.54
CDH3-202ENST00000429102 OR6C2Q9NZP2 312 aa11.65□□□□□ -0.54
CDH3-202ENST00000429102 SLC9B1P1A6NJY1 282 aa11.65□□□□□ -0.54
CDH3-202ENST00000429102 CHST10O43529 356 aa11.65□□□□□ -0.54
CDH3-202ENST00000429102 LILRB5O75023 590 aa11.65□□□□□ -0.54
CDH3-202ENST00000429102 RPP14O95059 124 aaKnown RBP11.65□□□□□ -0.54
CDH3-202ENST00000429102 PROS1P07225 676 aa11.65□□□□□ -0.54
CDH3-202ENST00000429102 TFPIP10646 304 aa11.65□□□□□ -0.54
CDH3-202ENST00000429102 CSNK2A2P19784 350 aaPredicted RBP11.65□□□□□ -0.54
CDH3-202ENST00000429102 IFNGR2P38484 337 aa11.65□□□□□ -0.54
CDH3-202ENST00000429102 MLLT3P42568 568 aaPredicted RBP11.65□□□□□ -0.54
CDH3-202ENST00000429102 C21orf58P58505 322 aa11.65□□□□□ -0.54
CDH3-202ENST00000429102 FAM111BQ6SJ93 734 aa11.65□□□□□ -0.54
CDH3-202ENST00000429102 TOMM5Q8N4H5 51 aa11.65□□□□□ -0.54
CDH3-202ENST00000429102 BMPERQ8N8U9 685 aa11.65□□□□□ -0.54
CDH3-202ENST00000429102 SPATA5L1Q9BVQ7 753 aa11.65□□□□□ -0.54
CDH3-202ENST00000429102 NARFLQ9H6Q4 476 aa11.65□□□□□ -0.54
CDH3-202ENST00000429102 STARD5Q9NSY2 213 aa11.65□□□□□ -0.54
CDH3-202ENST00000429102 TEX13CA0A0J9YWL9 993 aa11.65□□□□□ -0.55
CDH3-202ENST00000429102 A0A1W2PP55 124 aa11.65□□□□□ -0.55
CDH3-202ENST00000429102 SERTM1A2A2V5 107 aa11.65□□□□□ -0.55
CDH3-202ENST00000429102 LRIT2A6NDA9 550 aa11.65□□□□□ -0.55
CDH3-202ENST00000429102 PEX12O00623 359 aa11.65□□□□□ -0.55
CDH3-202ENST00000429102 PROM1O43490 865 aa11.65□□□□□ -0.55
CDH3-202ENST00000429102 CDC123O75794 336 aaPredicted RBP11.65□□□□□ -0.55
CDH3-202ENST00000429102 ENPP1P22413 925 aa11.65□□□□□ -0.55
CDH3-202ENST00000429102 EPHA5P54756 1037 aa11.65□□□□□ -0.55
CDH3-202ENST00000429102 CRYZQ08257 329 aaKnown RBP11.65□□□□□ -0.55
CDH3-202ENST00000429102 TPBGQ13641 420 aa11.65□□□□□ -0.55
CDH3-202ENST00000429102 MINDY4Q4G0A6 757 aa11.65□□□□□ -0.55
CDH3-202ENST00000429102 RFLNBQ8N5W9 214 aa11.65□□□□□ -0.55
CDH3-202ENST00000429102 ACBD7Q8N6N7 88 aa11.65□□□□□ -0.55
CDH3-202ENST00000429102 ZNF655Q8N720 491 aaPredicted RBP11.65□□□□□ -0.55
CDH3-202ENST00000429102 FRMD1Q8N878 549 aa11.65□□□□□ -0.55
CDH3-202ENST00000429102 OR2T33Q8NG76 320 aa11.65□□□□□ -0.55
CDH3-202ENST00000429102 CACNG6Q9BXT2 260 aa11.65□□□□□ -0.55
CDH3-202ENST00000429102 AICDAQ9GZX7 198 aa11.65□□□□□ -0.55
CDH3-202ENST00000429102 OR10A4Q9H209 315 aa11.65□□□□□ -0.55
CDH3-202ENST00000429102 ING4Q9UNL4 249 aa11.65□□□□□ -0.55
CDH3-202ENST00000429102 EXOSC1Q9Y3B2 195 aaKnown RBP11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms