RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 PNPLA3Q9NST1 481 aa8.3□□□□□ -1.08
SMC1A-203ENST00000428014 EXD2Q9NVH0 621 aa8.3□□□□□ -1.08
SMC1A-203ENST00000428014 TAS2R10Q9NYW0 307 aa8.3□□□□□ -1.08
SMC1A-203ENST00000428014 PPP4R1LQ9P1A2 415 aa8.3□□□□□ -1.08
SMC1A-203ENST00000428014 SPRR3Q9UBC9 169 aa8.3□□□□□ -1.08
SMC1A-203ENST00000428014 ZNF175Q9Y473 711 aa8.3□□□□□ -1.08
SMC1A-203ENST00000428014 HRH3Q9Y5N1 445 aa8.3□□□□□ -1.08
SMC1A-203ENST00000428014 LIPGQ9Y5X9 500 aa8.3□□□□□ -1.08
SMC1A-203ENST00000428014 AP4B1Q9Y6B7 739 aa8.3□□□□□ -1.08
SMC1A-203ENST00000428014 INTS1Q8N201 2190 aaKnown RBP8.29□□□□□ -1.08
SMC1A-203ENST00000428014 G3V3Y1 287 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 ATP8B1O43520 1251 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 NDUFB5O43674 189 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 TNFRSF21O75509 655 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 OXSR1O95747 527 aaPredicted RBP8.29□□□□□ -1.08
SMC1A-203ENST00000428014 ANGPTL1O95841 491 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 C6orf47O95873 294 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 IL2RAP01589 272 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 CELA3AP09093 270 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 ACP2P11117 423 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 CAPN3P20807 821 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 DPP4P27487 766 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 HTR1EP28566 365 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 TRPC1P48995 793 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 LHX2P50458 406 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 ATP12AP54707 1039 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 PPP2R2AP63151 447 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 HSF1Q00613 529 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 SORDQ00796 357 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 TFF3Q07654 80 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 LASP1Q14847 261 aaKnown RBP8.29□□□□□ -1.08
SMC1A-203ENST00000428014 ZNF141Q15928 474 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 NNATQ16517 81 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 ARHGAP11BQ3KRB8 267 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 SLC25A53Q5H9E4 307 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 PRAMEF8Q5VWM4 474 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 PRAMEF7Q5VXH5 474 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 METTL21CQ5VZV1 264 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 FAM219BQ5XKK7 198 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 SAXO2Q658L1 398 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 BICRALQ6AI39 1079 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 OR2A2Q6IF42 318 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 EPGNQ6UW88 154 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 CMIPQ8IY22 773 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 PRR22Q8IZ63 422 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 MARVELD2Q8N4S9 558 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 KRTCAP2Q8N6L1 136 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 ANKRD42Q8N9B4 389 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 OR4K17Q8NGC6 315 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 OR4N2Q8NGD1 307 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 CLHC1Q8NHS4 586 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 LRRC8CQ8TDW0 803 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 DOK4Q8TEW6 326 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 SLC35B4Q969S0 331 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 EFHD2Q96C19 240 aaPredicted RBP8.29□□□□□ -1.08
SMC1A-203ENST00000428014 MAGEB18Q96M61 343 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 JSRP1Q96MG2 331 aaPredicted RBP8.29□□□□□ -1.08
SMC1A-203ENST00000428014 ZBTB18Q99592 522 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 C1orf50Q9BV19 199 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 ZNF350Q9GZX5 532 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 RABEP2Q9H5N1 569 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 EXO5Q9H790 373 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 ANKRA2Q9H9E1 313 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 GALNT9Q9HCQ5 603 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 KCNJ16Q9NPI9 418 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 PNPOQ9NVS9 261 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 RNF6Q9Y252 685 aa8.29□□□□□ -1.08
SMC1A-203ENST00000428014 ABCA12Q86UK0 2595 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 CELSR2Q9HCU4 2923 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 C15orf38-AP3S2A0A0A6YYH1 394 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 PRSS44E7EML9 344 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 J3QL48 77 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 SYT5O00445 386 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 FAAHO00519 579 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 SCDO00767 359 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 DVL2O14641 736 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 GNB5O14775 395 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 STX11O75558 287 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 SLC22A3O75751 556 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 TRAPPC6AO75865 159 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 TOXO94900 526 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 RCBTB2O95199 551 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 KRT75O95678 551 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 ALDOCP09972 364 aaKnown RBP8.28□□□□□ -1.08
SMC1A-203ENST00000428014 FCGR2AP12318 317 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 HPGDP15428 266 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 ATP6V1C1P21283 382 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 SSTR2P30874 369 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 S100A3P33764 101 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 OPRM1P35372 400 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 DCTP40126 519 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 ST13P50502 369 aaKnown RBP8.28□□□□□ -1.08
SMC1A-203ENST00000428014 CLDN18P56856 261 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 NUP107P57740 925 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 B3GALT5-AS1P59052 145 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 RAC1P63000 192 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 FAM174BQ3ZCQ3 159 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 DCST2Q5T1A1 773 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 ATAD3BQ5T9A4 648 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 SP5Q6BEB4 398 aaPredicted RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms