RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 CFLARO15519 480 aa11.51□□□□□ -0.57
SGCE-203ENST00000425444 GMFGO60234 142 aa11.51□□□□□ -0.57
SGCE-203ENST00000425444 FADS1O60427 444 aa11.51□□□□□ -0.57
SGCE-203ENST00000425444 NKX2-2O95096 273 aa11.51□□□□□ -0.57
SGCE-203ENST00000425444 SNUPNO95149 360 aaKnown RBP11.51□□□□□ -0.57
SGCE-203ENST00000425444 ALOX5P09917 674 aa11.51□□□□□ -0.57
SGCE-203ENST00000425444 ACP2P11117 423 aa11.51□□□□□ -0.57
SGCE-203ENST00000425444 LAMP1P11279 417 aa11.51□□□□□ -0.57
SGCE-203ENST00000425444 HPGDP15428 266 aa11.51□□□□□ -0.57
SGCE-203ENST00000425444 HK1P19367 917 aa11.51□□□□□ -0.57
SGCE-203ENST00000425444 PRPS1L1P21108 318 aa11.51□□□□□ -0.57
SGCE-203ENST00000425444 UQCRC1P31930 480 aa11.51□□□□□ -0.57
SGCE-203ENST00000425444 SLC1A6P48664 564 aa11.51□□□□□ -0.57
SGCE-203ENST00000425444 STARP49675 285 aa11.51□□□□□ -0.57
SGCE-203ENST00000425444 GFRA1P56159 465 aa11.51□□□□□ -0.57
SGCE-203ENST00000425444 GANABQ14697 944 aaKnown RBP11.51□□□□□ -0.57
SGCE-203ENST00000425444 MLC1Q15049 377 aa11.51□□□□□ -0.57
SGCE-203ENST00000425444 DUSP5Q16690 384 aa11.51□□□□□ -0.57
SGCE-203ENST00000425444 GRAMD1BQ3KR37 738 aa11.51□□□□□ -0.57
SGCE-203ENST00000425444 FLYWCH1Q4VC44 716 aa11.51□□□□□ -0.57
SGCE-203ENST00000425444 HHATQ5VTY9 493 aa11.51□□□□□ -0.57
SGCE-203ENST00000425444 FIGNL1Q6PIW4 674 aa11.51□□□□□ -0.57
SGCE-203ENST00000425444 MARCH3Q86UD3 253 aa11.51□□□□□ -0.57
SGCE-203ENST00000425444 KIRREL3Q8IZU9 778 aa11.51□□□□□ -0.57
SGCE-203ENST00000425444 KRTCAP2Q8N6L1 136 aa11.51□□□□□ -0.57
SGCE-203ENST00000425444 NATD1Q8N6N6 113 aa11.51□□□□□ -0.57
SGCE-203ENST00000425444 FADS6Q8N9I5 356 aa11.51□□□□□ -0.57
SGCE-203ENST00000425444 NAXEQ8NCW5 288 aa11.51□□□□□ -0.57
SGCE-203ENST00000425444 OR2M3Q8NG83 312 aa11.51□□□□□ -0.57
SGCE-203ENST00000425444 OR5P2Q8WZ92 322 aa11.51□□□□□ -0.57
SGCE-203ENST00000425444 FAM120BQ96EK7 910 aaKnown RBP11.51□□□□□ -0.57
SGCE-203ENST00000425444 C16orf58Q96GQ5 468 aa11.51□□□□□ -0.57
SGCE-203ENST00000425444 TUBA1CQ9BQE3 449 aa11.51□□□□□ -0.57
SGCE-203ENST00000425444 YIPF4Q9BSR8 244 aa11.51□□□□□ -0.57
SGCE-203ENST00000425444 BEX4Q9NWD9 120 aaPredicted RBP11.51□□□□□ -0.57
SGCE-203ENST00000425444 MED11Q9P086 117 aa11.51□□□□□ -0.57
SGCE-203ENST00000425444 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.5□□□□□ -0.57
SGCE-203ENST00000425444 MBD3L4A6NDZ8 208 aaPredicted RBP11.5□□□□□ -0.57
SGCE-203ENST00000425444 MBD3L3A6NE82 208 aaPredicted RBP11.5□□□□□ -0.57
SGCE-203ENST00000425444 MBD3L5A6NJ08 208 aaPredicted RBP11.5□□□□□ -0.57
SGCE-203ENST00000425444 ANGPTL1O95841 491 aa11.5□□□□□ -0.57
SGCE-203ENST00000425444 C6orf47O95873 294 aa11.5□□□□□ -0.57
SGCE-203ENST00000425444 IGKV1D-16P01601 117 aa11.5□□□□□ -0.57
SGCE-203ENST00000425444 HMGN2P05204 90 aaKnown RBP11.5□□□□□ -0.57
SGCE-203ENST00000425444 DHRS4L1P0CG22 281 aa11.5□□□□□ -0.57
SGCE-203ENST00000425444 G6PDP11413 515 aa11.5□□□□□ -0.57
SGCE-203ENST00000425444 CPN1P15169 458 aa11.5□□□□□ -0.57
SGCE-203ENST00000425444 CHMP24386 653 aa11.5□□□□□ -0.57
SGCE-203ENST00000425444 CEACAM8P31997 349 aaPredicted RBP11.5□□□□□ -0.57
SGCE-203ENST00000425444 SOAT1P35610 550 aa11.5□□□□□ -0.57
SGCE-203ENST00000425444 ASCL1P50553 236 aa11.5□□□□□ -0.57
SGCE-203ENST00000425444 RPL14P50914 215 aaKnown RBP11.5□□□□□ -0.57
SGCE-203ENST00000425444 EMX2Q04743 252 aa11.5□□□□□ -0.57
SGCE-203ENST00000425444 STX3Q13277 289 aa11.5□□□□□ -0.57
SGCE-203ENST00000425444 TP53BP2Q13625 1128 aa11.5□□□□□ -0.57
SGCE-203ENST00000425444 LASP1Q14847 261 aaKnown RBP11.5□□□□□ -0.57
SGCE-203ENST00000425444 LSM12Q3MHD2 195 aaKnown RBP11.5□□□□□ -0.57
SGCE-203ENST00000425444 TNFAIP8L3Q5GJ75 292 aa11.5□□□□□ -0.57
SGCE-203ENST00000425444 Q5PR19 223 aa11.5□□□□□ -0.57
SGCE-203ENST00000425444 ZCCHC12Q6PEW1 402 aa11.5□□□□□ -0.57
SGCE-203ENST00000425444 CHMP1BQ7LBR1 199 aa11.5□□□□□ -0.57
SGCE-203ENST00000425444 UBQLNLQ8IYU4 475 aa11.5□□□□□ -0.57
SGCE-203ENST00000425444 RELL2Q8NC24 303 aaPredicted RBP11.5□□□□□ -0.57
SGCE-203ENST00000425444 SLC16A11Q8NCK7 471 aa11.5□□□□□ -0.57
SGCE-203ENST00000425444 OR56A1Q8NGH5 318 aa11.5□□□□□ -0.57
SGCE-203ENST00000425444 MBD3L2Q8NHZ7 208 aaPredicted RBP11.5□□□□□ -0.57
SGCE-203ENST00000425444 ZPLD1Q8TCW7 415 aa11.5□□□□□ -0.57
SGCE-203ENST00000425444 MGARPQ8TDB4 240 aa11.5□□□□□ -0.57
SGCE-203ENST00000425444 DUSP19Q8WTR2 217 aa11.5□□□□□ -0.57
SGCE-203ENST00000425444 FAM222BQ8WU58 562 aa11.5□□□□□ -0.57
SGCE-203ENST00000425444 GIMAP5Q96F15 307 aa11.5□□□□□ -0.57
SGCE-203ENST00000425444 DUSP26Q9BV47 211 aa11.5□□□□□ -0.57
SGCE-203ENST00000425444 BHLHE41Q9C0J9 482 aaPredicted RBP11.5□□□□□ -0.57
SGCE-203ENST00000425444 AKTIPQ9H8T0 292 aa11.5□□□□□ -0.57
SGCE-203ENST00000425444 CALHM2Q9HA72 323 aa11.5□□□□□ -0.57
SGCE-203ENST00000425444 SIRT3Q9NTG7 399 aaPredicted RBP11.5□□□□□ -0.57
SGCE-203ENST00000425444 NTMQ9P121 344 aa11.5□□□□□ -0.57
SGCE-203ENST00000425444 ZNF629Q9UEG4 869 aaPredicted RBP11.5□□□□□ -0.57
SGCE-203ENST00000425444 FAF1Q9UNN5 650 aaPredicted RBP11.5□□□□□ -0.57
SGCE-203ENST00000425444 MRPS18CQ9Y3D5 142 aaKnown RBP11.5□□□□□ -0.57
SGCE-203ENST00000425444 FREM3P0C091 2139 aa11.5□□□□□ -0.57
SGCE-203ENST00000425444 CLCA1A8K7I4 914 aa11.49□□□□□ -0.57
SGCE-203ENST00000425444 B4DXG7 233 aa11.49□□□□□ -0.57
SGCE-203ENST00000425444 EEF1E1-BLOC1S5C9J1V9 151 aa11.49□□□□□ -0.57
SGCE-203ENST00000425444 SCDO00767 359 aa11.49□□□□□ -0.57
SGCE-203ENST00000425444 EEF1E1O43324 174 aaKnown RBP11.49□□□□□ -0.57
SGCE-203ENST00000425444 NDUFB5O43674 189 aa11.49□□□□□ -0.57
SGCE-203ENST00000425444 ZIC3O60481 467 aa11.49□□□□□ -0.57
SGCE-203ENST00000425444 KCNK2O95069 426 aa11.49□□□□□ -0.57
SGCE-203ENST00000425444 OXSR1O95747 527 aaPredicted RBP11.49□□□□□ -0.57
SGCE-203ENST00000425444 KRT16P08779 473 aa11.49□□□□□ -0.57
SGCE-203ENST00000425444 TMIGD3P0DMS9 266 aaPredicted RBP11.49□□□□□ -0.57
SGCE-203ENST00000425444 ATP6V1C1P21283 382 aa11.49□□□□□ -0.57
SGCE-203ENST00000425444 PEX19P40855 299 aa11.49□□□□□ -0.57
SGCE-203ENST00000425444 MAP3K8P41279 467 aa11.49□□□□□ -0.57
SGCE-203ENST00000425444 CCT3P49368 545 aaKnown RBP11.49□□□□□ -0.57
SGCE-203ENST00000425444 LHX2P50458 406 aa11.49□□□□□ -0.57
SGCE-203ENST00000425444 AGFG1P52594 562 aaKnown RBP11.49□□□□□ -0.57
SGCE-203ENST00000425444 ZNF136P52737 540 aa11.49□□□□□ -0.57
SGCE-203ENST00000425444 POU6F2P78424 691 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms