RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 EMC4Q5J8M3 183 aa16.79■□□□□ 0.28
HDAC6-205ENST00000423941 OR5M10Q6IEU7 315 aa16.79■□□□□ 0.28
HDAC6-205ENST00000423941 TYW3Q6IPR3 259 aaKnown RBP16.79■□□□□ 0.28
HDAC6-205ENST00000423941 FRRS1Q6ZNA5 592 aa16.79■□□□□ 0.28
HDAC6-205ENST00000423941 MTERF4Q7Z6M4 381 aaKnown RBP16.79■□□□□ 0.28
HDAC6-205ENST00000423941 PIGWQ7Z7B1 504 aa16.79■□□□□ 0.28
HDAC6-205ENST00000423941 MISPQ8IVT2 679 aa16.79■□□□□ 0.28
HDAC6-205ENST00000423941 FAM83FQ8NEG4 500 aaPredicted RBP16.79■□□□□ 0.28
HDAC6-205ENST00000423941 FAM57AQ8TBR7 257 aa16.79■□□□□ 0.28
HDAC6-205ENST00000423941 PNPT1Q8TCS8 783 aaKnown RBP16.79■□□□□ 0.28
HDAC6-205ENST00000423941 SLC38A1Q9H2H9 487 aa16.79■□□□□ 0.28
HDAC6-205ENST00000423941 THUMPD1Q9NXG2 353 aaKnown RBP16.79■□□□□ 0.28
HDAC6-205ENST00000423941 PPP4R1LQ9P1A2 415 aa16.79■□□□□ 0.28
HDAC6-205ENST00000423941 WIPF3A6NGB9 483 aa16.78■□□□□ 0.28
HDAC6-205ENST00000423941 ZNHIT1O43257 154 aa16.78■□□□□ 0.28
HDAC6-205ENST00000423941 NDUFB5O43674 189 aa16.78■□□□□ 0.28
HDAC6-205ENST00000423941 KIAA0513O60268 411 aa16.78■□□□□ 0.28
HDAC6-205ENST00000423941 TNFRSF21O75509 655 aa16.78■□□□□ 0.28
HDAC6-205ENST00000423941 UGT2B17O75795 530 aa16.78■□□□□ 0.28
HDAC6-205ENST00000423941 TFPTP0C1Z6 253 aa16.78■□□□□ 0.28
HDAC6-205ENST00000423941 ETFAP13804 333 aa16.78■□□□□ 0.28
HDAC6-205ENST00000423941 PPIBP23284 216 aaKnown RBP16.78■□□□□ 0.28
HDAC6-205ENST00000423941 MSX1P28360 303 aa16.78■□□□□ 0.28
HDAC6-205ENST00000423941 DSCR4P56555 118 aaPredicted RBP16.78■□□□□ 0.28
HDAC6-205ENST00000423941 FADDQ13158 208 aa16.78■□□□□ 0.28
HDAC6-205ENST00000423941 CD226Q15762 336 aa16.78■□□□□ 0.28
HDAC6-205ENST00000423941 SYPL1Q16563 259 aa16.78■□□□□ 0.28
HDAC6-205ENST00000423941 FLYWCH1Q4VC44 716 aa16.78■□□□□ 0.28
HDAC6-205ENST00000423941 C4orf17Q53FE4 359 aa16.78■□□□□ 0.28
HDAC6-205ENST00000423941 RUNDC3AQ59EK9 446 aa16.78■□□□□ 0.28
HDAC6-205ENST00000423941 LRRC74BQ6ZQY2 392 aa16.78■□□□□ 0.28
HDAC6-205ENST00000423941 C16orf62Q7Z3J2 963 aa16.78■□□□□ 0.28
HDAC6-205ENST00000423941 DOLPP1Q86YN1 238 aa16.78■□□□□ 0.28
HDAC6-205ENST00000423941 ZNF527Q8NB42 609 aa16.78■□□□□ 0.28
HDAC6-205ENST00000423941 ZG16BQ96DA0 208 aa16.78■□□□□ 0.28
HDAC6-205ENST00000423941 MYLK2Q9H1R3 596 aa16.78■□□□□ 0.28
HDAC6-205ENST00000423941 SLC6A15Q9H2J7 730 aa16.78■□□□□ 0.28
HDAC6-205ENST00000423941 DSN1Q9H410 356 aa16.78■□□□□ 0.28
HDAC6-205ENST00000423941 RAD21L1Q9H4I0 556 aa16.78■□□□□ 0.28
HDAC6-205ENST00000423941 SPRR3Q9UBC9 169 aa16.78■□□□□ 0.28
HDAC6-205ENST00000423941 MKLN1Q9UL63 735 aa16.78■□□□□ 0.28
HDAC6-205ENST00000423941 WDR45Q9Y484 360 aa16.78■□□□□ 0.28
HDAC6-205ENST00000423941 DTNAQ9Y4J8 743 aa16.78■□□□□ 0.28
HDAC6-205ENST00000423941 DSPPQ9NZW4 1301 aa16.77■□□□□ 0.28
HDAC6-205ENST00000423941 NPIPA5A0A0B4J1W7 369 aa16.77■□□□□ 0.28
HDAC6-205ENST00000423941 NPIPA7E9PJI5 369 aa16.77■□□□□ 0.28
HDAC6-205ENST00000423941 SCDO00767 359 aa16.77■□□□□ 0.28
HDAC6-205ENST00000423941 CDC40O60508 579 aaKnown RBP eCLIP16.77■□□□□ 0.28
HDAC6-205ENST00000423941 CCDC22O60826 627 aa16.77■□□□□ 0.28
HDAC6-205ENST00000423941 CHRM4P08173 479 aa16.77■□□□□ 0.28
HDAC6-205ENST00000423941 NPIPA8P0DM63 369 aa16.77■□□□□ 0.28
HDAC6-205ENST00000423941 GFRA1P56159 465 aa16.77■□□□□ 0.28
HDAC6-205ENST00000423941 GANABQ14697 944 aaKnown RBP16.77■□□□□ 0.28
HDAC6-205ENST00000423941 MAPK14Q16539 360 aa16.77■□□□□ 0.28
HDAC6-205ENST00000423941 C3AR1Q16581 482 aa16.77■□□□□ 0.28
HDAC6-205ENST00000423941 TMEM44Q2T9K0 475 aa16.77■□□□□ 0.28
HDAC6-205ENST00000423941 GLYR1Q49A26 553 aaPredicted RBP16.77■□□□□ 0.28
HDAC6-205ENST00000423941 EIPR1Q53HC9 387 aa16.77■□□□□ 0.28
HDAC6-205ENST00000423941 VASNQ6EMK4 673 aa16.77■□□□□ 0.28
HDAC6-205ENST00000423941 OLIG3Q7RTU3 272 aa16.77■□□□□ 0.28
HDAC6-205ENST00000423941 CPLX4Q7Z7G2 160 aa16.77■□□□□ 0.28
HDAC6-205ENST00000423941 C10orf111Q8N326 155 aa16.77■□□□□ 0.28
HDAC6-205ENST00000423941 ANKFN1Q8N957 763 aa16.77■□□□□ 0.28
HDAC6-205ENST00000423941 DTNBP1Q96EV8 351 aa16.77■□□□□ 0.28
HDAC6-205ENST00000423941 CPPED1Q9BRF8 314 aaPredicted RBP16.77■□□□□ 0.28
HDAC6-205ENST00000423941 CCDC106Q9BWC9 280 aa16.77■□□□□ 0.28
HDAC6-205ENST00000423941 NSRP1Q9H0G5 558 aaKnown RBP16.77■□□□□ 0.28
HDAC6-205ENST00000423941 IKZF5Q9H5V7 419 aa16.77■□□□□ 0.28
HDAC6-205ENST00000423941 RUBCNLQ9H714 662 aa16.77■□□□□ 0.28
HDAC6-205ENST00000423941 MED11Q9P086 117 aa16.77■□□□□ 0.28
HDAC6-205ENST00000423941 HEATR5AQ86XA9 2040 aa16.77■□□□□ 0.27
HDAC6-205ENST00000423941 CENPVL1A0A0U1RR11 272 aa16.76■□□□□ 0.27
HDAC6-205ENST00000423941 A0A1B0GUH1 482 aa16.76■□□□□ 0.27
HDAC6-205ENST00000423941 BCKDKO14874 412 aa16.76■□□□□ 0.27
HDAC6-205ENST00000423941 ANGPT2O15123 496 aa16.76■□□□□ 0.27
HDAC6-205ENST00000423941 DNAJA2O60884 412 aa16.76■□□□□ 0.27
HDAC6-205ENST00000423941 SEMA7AO75326 666 aa16.76■□□□□ 0.27
HDAC6-205ENST00000423941 TRAPPC6AO75865 159 aa16.76■□□□□ 0.27
HDAC6-205ENST00000423941 H6PDO95479 791 aa16.76■□□□□ 0.27
HDAC6-205ENST00000423941 NPPAP01160 153 aa16.76■□□□□ 0.27
HDAC6-205ENST00000423941 HPGDP15428 266 aa16.76■□□□□ 0.27
HDAC6-205ENST00000423941 RPS4Y1P22090 263 aaKnown RBP16.76■□□□□ 0.27
HDAC6-205ENST00000423941 DPP4P27487 766 aa16.76■□□□□ 0.27
HDAC6-205ENST00000423941 CRATP43155 626 aa16.76■□□□□ 0.27
HDAC6-205ENST00000423941 B3GALT5-AS1P59052 145 aa16.76■□□□□ 0.27
HDAC6-205ENST00000423941 DSTNP60981 165 aa16.76■□□□□ 0.27
HDAC6-205ENST00000423941 CHRNEQ04844 493 aa16.76■□□□□ 0.27
HDAC6-205ENST00000423941 CRYZQ08257 329 aaKnown RBP16.76■□□□□ 0.27
HDAC6-205ENST00000423941 GPR68Q15743 365 aa16.76■□□□□ 0.27
HDAC6-205ENST00000423941 GXYLT1Q4G148 440 aa16.76■□□□□ 0.27
HDAC6-205ENST00000423941 WIPI1Q5MNZ9 446 aaPredicted RBP16.76■□□□□ 0.27
HDAC6-205ENST00000423941 ZNF619Q8N2I2 560 aa16.76■□□□□ 0.27
HDAC6-205ENST00000423941 SLC38A5Q8WUX1 472 aa16.76■□□□□ 0.27
HDAC6-205ENST00000423941 C1GALT1C1Q96EU7 318 aa16.76■□□□□ 0.27
HDAC6-205ENST00000423941 ANKRD27Q96NW4 1050 aa16.76■□□□□ 0.27
HDAC6-205ENST00000423941 CGREF1Q99674 301 aa16.76■□□□□ 0.27
HDAC6-205ENST00000423941 TIMP4Q99727 224 aa16.76■□□□□ 0.27
HDAC6-205ENST00000423941 LDAHQ9H6V9 325 aa16.76■□□□□ 0.27
HDAC6-205ENST00000423941 MTHFD2LQ9H903 347 aaPredicted RBP16.76■□□□□ 0.27
HDAC6-205ENST00000423941 SUCOQ9UBS9 1254 aaKnown RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 1615.2 ms