RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 VIPAS39Q9H9C1 493 aa18.66■□□□□ 0.58
PKNOX1-202ENST00000418336 CAMK2AQ9UQM7 478 aa18.66■□□□□ 0.58
PKNOX1-202ENST00000418336 RPH3AQ9Y2J0 694 aaPredicted RBP18.66■□□□□ 0.58
PKNOX1-202ENST00000418336 PRSS51A0A1B0GVH4 220 aa18.65■□□□□ 0.58
PKNOX1-202ENST00000418336 A0A1W2PQD3 144 aa18.65■□□□□ 0.58
PKNOX1-202ENST00000418336 FAM90A27PA6NNH2 459 aa18.65■□□□□ 0.58
PKNOX1-202ENST00000418336 C9JVG2 144 aa18.65■□□□□ 0.58
PKNOX1-202ENST00000418336 E9PBE3 544 aa18.65■□□□□ 0.58
PKNOX1-202ENST00000418336 HCRTR2O43614 444 aa18.65■□□□□ 0.58
PKNOX1-202ENST00000418336 ZNF136P52737 540 aa18.65■□□□□ 0.58
PKNOX1-202ENST00000418336 RPS26P62854 115 aaKnown RBP18.65■□□□□ 0.58
PKNOX1-202ENST00000418336 C17orf67Q0P5P2 114 aa18.65■□□□□ 0.58
PKNOX1-202ENST00000418336 GANABQ14697 944 aaKnown RBP18.65■□□□□ 0.58
PKNOX1-202ENST00000418336 DCST2Q5T1A1 773 aa18.65■□□□□ 0.58
PKNOX1-202ENST00000418336 AP1ARQ63HQ0 302 aa18.65■□□□□ 0.58
PKNOX1-202ENST00000418336 ARSKQ6UWY0 536 aa18.65■□□□□ 0.58
PKNOX1-202ENST00000418336 CHDHQ8NE62 594 aaPredicted RBP18.65■□□□□ 0.58
PKNOX1-202ENST00000418336 OR4K17Q8NGC6 315 aa18.65■□□□□ 0.58
PKNOX1-202ENST00000418336 PIWIL2Q8TC59 973 aaKnown RBP18.65■□□□□ 0.58
PKNOX1-202ENST00000418336 MIPOL1Q8TD10 442 aa18.65■□□□□ 0.58
PKNOX1-202ENST00000418336 ZNF524Q96C55 264 aa18.65■□□□□ 0.58
PKNOX1-202ENST00000418336 C7orf26Q96N11 449 aa18.65■□□□□ 0.58
PKNOX1-202ENST00000418336 CALHM2Q9HA72 323 aa18.65■□□□□ 0.58
PKNOX1-202ENST00000418336 SLCO1B3Q9NPD5 702 aa18.65■□□□□ 0.58
PKNOX1-202ENST00000418336 SDHAF3Q9NRP4 125 aa18.65■□□□□ 0.58
PKNOX1-202ENST00000418336 CLCF1Q9UBD9 225 aa18.65■□□□□ 0.58
PKNOX1-202ENST00000418336 KCNE5Q9UJ90 142 aa18.65■□□□□ 0.58
PKNOX1-202ENST00000418336 DKKL1Q9UK85 242 aa18.65■□□□□ 0.58
PKNOX1-202ENST00000418336 PDZD2O15018 2839 aa18.64■□□□□ 0.58
PKNOX1-202ENST00000418336 TRPC5OSA6NMA1 111 aa18.64■□□□□ 0.57
PKNOX1-202ENST00000418336 SLCO1B7G3V0H7 640 aa18.64■□□□□ 0.57
PKNOX1-202ENST00000418336 OIP5O43482 229 aa18.64■□□□□ 0.57
PKNOX1-202ENST00000418336 PSMA4P25789 261 aaKnown RBP18.64■□□□□ 0.57
PKNOX1-202ENST00000418336 CLNS1AP54105 237 aaKnown RBP18.64■□□□□ 0.57
PKNOX1-202ENST00000418336 DLX5P56178 289 aa18.64■□□□□ 0.57
PKNOX1-202ENST00000418336 NME5P56597 212 aa18.64■□□□□ 0.57
PKNOX1-202ENST00000418336 BCL2A1Q16548 175 aa18.64■□□□□ 0.57
PKNOX1-202ENST00000418336 DPY19L1Q2PZI1 675 aa18.64■□□□□ 0.57
PKNOX1-202ENST00000418336 FAM174BQ3ZCQ3 159 aa18.64■□□□□ 0.57
PKNOX1-202ENST00000418336 KLHL26Q53HC5 615 aa18.64■□□□□ 0.57
PKNOX1-202ENST00000418336 SAXO2Q658L1 398 aa18.64■□□□□ 0.57
PKNOX1-202ENST00000418336 C6orf120Q7Z4R8 191 aa18.64■□□□□ 0.57
PKNOX1-202ENST00000418336 OR5M1Q8NGP8 315 aa18.64■□□□□ 0.57
PKNOX1-202ENST00000418336 OR10Q1Q8NGQ4 319 aa18.64■□□□□ 0.57
PKNOX1-202ENST00000418336 JADE3Q92613 823 aa18.64■□□□□ 0.57
PKNOX1-202ENST00000418336 SFXN2Q96NB2 322 aa18.64■□□□□ 0.57
PKNOX1-202ENST00000418336 CCDC115Q96NT0 180 aa18.64■□□□□ 0.57
PKNOX1-202ENST00000418336 TRIB1Q96RU8 372 aa18.64■□□□□ 0.57
PKNOX1-202ENST00000418336 TBL1XR1Q9BZK7 514 aa18.64■□□□□ 0.57
PKNOX1-202ENST00000418336 UBQLN4Q9NRR5 601 aa18.64■□□□□ 0.57
PKNOX1-202ENST00000418336 ZNF337Q9Y3M9 751 aa18.64■□□□□ 0.57
PKNOX1-202ENST00000418336 INTS1Q8N201 2190 aaKnown RBP18.64■□□□□ 0.57
PKNOX1-202ENST00000418336 NPIPA5A0A0B4J1W7 369 aa18.63■□□□□ 0.57
PKNOX1-202ENST00000418336 CENPVL1A0A0U1RR11 272 aa18.63■□□□□ 0.57
PKNOX1-202ENST00000418336 RNF103-CHMP3A0A140T963 221 aa18.63■□□□□ 0.57
PKNOX1-202ENST00000418336 OR2M5A3KFT3 312 aa18.63■□□□□ 0.57
PKNOX1-202ENST00000418336 NPIPA7E9PJI5 369 aa18.63■□□□□ 0.57
PKNOX1-202ENST00000418336 H0YC42 278 aa18.63■□□□□ 0.57
PKNOX1-202ENST00000418336 SNRPB2P08579 225 aaKnown RBP18.63■□□□□ 0.57
PKNOX1-202ENST00000418336 NPIPA8P0DM63 369 aa18.63■□□□□ 0.57
PKNOX1-202ENST00000418336 HK1P19367 917 aa18.63■□□□□ 0.57
PKNOX1-202ENST00000418336 TCEA1P23193 301 aaKnown RBP18.63■□□□□ 0.57
PKNOX1-202ENST00000418336 DGKQP52824 942 aa18.63■□□□□ 0.57
PKNOX1-202ENST00000418336 SUCLG1P53597 346 aaKnown RBP18.63■□□□□ 0.57
PKNOX1-202ENST00000418336 TPD52P55327 224 aaPredicted RBP18.63■□□□□ 0.57
PKNOX1-202ENST00000418336 FUT5Q11128 374 aa18.63■□□□□ 0.57
PKNOX1-202ENST00000418336 SPDYE7PQ495Y7 208 aa18.63■□□□□ 0.57
PKNOX1-202ENST00000418336 GLYR1Q49A26 553 aaPredicted RBP18.63■□□□□ 0.57
PKNOX1-202ENST00000418336 HEPHL1Q6MZM0 1159 aa18.63■□□□□ 0.57
PKNOX1-202ENST00000418336 EPGNQ6UW88 154 aa18.63■□□□□ 0.57
PKNOX1-202ENST00000418336 HDXQ7Z353 690 aa18.63■□□□□ 0.57
PKNOX1-202ENST00000418336 MCEMP1Q8IX19 187 aa18.63■□□□□ 0.57
PKNOX1-202ENST00000418336 GATSQ8NAP1 163 aa18.63■□□□□ 0.57
PKNOX1-202ENST00000418336 OR4A15Q8NGL6 344 aa18.63■□□□□ 0.57
PKNOX1-202ENST00000418336 ADAMTS15Q8TE58 950 aa18.63■□□□□ 0.57
PKNOX1-202ENST00000418336 MARK4Q96L34 752 aa18.63■□□□□ 0.57
PKNOX1-202ENST00000418336 SDF2Q99470 211 aa18.63■□□□□ 0.57
PKNOX1-202ENST00000418336 BTNL2Q9UIR0 455 aa18.63■□□□□ 0.57
PKNOX1-202ENST00000418336 PRAMEF27A3QJZ7 478 aa18.62■□□□□ 0.57
PKNOX1-202ENST00000418336 HSPB2A8KAH6 182 aa18.62■□□□□ 0.57
PKNOX1-202ENST00000418336 SHISA8B8ZZ34 492 aa18.62■□□□□ 0.57
PKNOX1-202ENST00000418336 CFLARO15519 480 aa18.62■□□□□ 0.57
PKNOX1-202ENST00000418336 UQCRC2P22695 453 aa18.62■□□□□ 0.57
PKNOX1-202ENST00000418336 SOAT1P35610 550 aa18.62■□□□□ 0.57
PKNOX1-202ENST00000418336 CDKN2CP42773 168 aa18.62■□□□□ 0.57
PKNOX1-202ENST00000418336 HSPB2Q16082 182 aa18.62■□□□□ 0.57
PKNOX1-202ENST00000418336 PDCD4Q53EL6 469 aaKnown RBP18.62■□□□□ 0.57
PKNOX1-202ENST00000418336 ANXA8L1Q5VT79 327 aa18.62■□□□□ 0.57
PKNOX1-202ENST00000418336 AAGABQ6PD74 315 aa18.62■□□□□ 0.57
PKNOX1-202ENST00000418336 OLIG3Q7RTU3 272 aa18.62■□□□□ 0.57
PKNOX1-202ENST00000418336 POC1BQ8TC44 478 aa18.62■□□□□ 0.57
PKNOX1-202ENST00000418336 NEURL3Q96EH8 262 aa18.62■□□□□ 0.57
PKNOX1-202ENST00000418336 INPP5KQ9BT40 448 aa18.62■□□□□ 0.57
PKNOX1-202ENST00000418336 SDR39U1Q9NRG7 319 aaPredicted RBP18.62■□□□□ 0.57
PKNOX1-202ENST00000418336 SLC6A13Q9NSD5 602 aa18.62■□□□□ 0.57
PKNOX1-202ENST00000418336 JKAMPQ9P055 326 aa18.62■□□□□ 0.57
PKNOX1-202ENST00000418336 FAF1Q9UNN5 650 aaPredicted RBP18.62■□□□□ 0.57
PKNOX1-202ENST00000418336 USH1CQ9Y6N9 552 aa18.62■□□□□ 0.57
PKNOX1-202ENST00000418336 MED12LQ86YW9 2145 aa18.62■□□□□ 0.57
PKNOX1-202ENST00000418336 C7orf72A4D263 438 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms