RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 ENTPD4Q9Y227 616 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 KIF26AQ9ULI4 1882 aaPredicted RBP7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 CREBL2O60519 120 aaPredicted RBP7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 PRAMEF2O60811 474 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 CLDN11O75508 207 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 CLDN7O95471 211 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 GBAP04062 536 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 SERPIND1P05546 499 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 SPAM1P38567 509 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 RFC3P40938 356 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 ARHGDIBP52566 201 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 RPS13P62277 151 aaKnown RBP7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 RPS26P62854 115 aaKnown RBP7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 PRSS53Q2L4Q9 553 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 TMEM255AQ5JRV8 349 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 PRAMEF19Q5SWL8 479 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 ZNF626Q68DY1 528 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 NHLRC1Q6VVB1 395 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 COMMD6Q7Z4G1 85 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 PIGKQ92643 395 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 CLP1Q92989 425 aaKnown RBP7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 PNPLA2Q96AD5 504 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 TM6SF2Q9BZW4 377 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 GAREM1Q9H706 876 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 FBXL3Q9UKT7 428 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 EDARQ9UNE0 448 aa7.51□□□□□ -1.21
HMGXB4-202ENST00000418170 RFXAPO00287 272 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 RNGTTO60942 597 aaKnown RBP7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 ATG12O94817 140 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 RLN2P04090 185 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 SAGP10523 405 aaPredicted RBP7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 B4GALNT1Q00973 533 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 CAP1Q01518 475 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 SERTAD2Q14140 314 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 CDC73Q6P1J9 531 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 MTFR2Q6P444 385 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 TNFAIP8L2Q6P589 184 aaPredicted RBP7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 PRSS45Q7RTY3 260 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 SFT2D1Q8WV19 159 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 ECHDC3Q96DC8 303 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 CXorf36Q9H7Y0 433 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 PRM3Q9NNZ6 103 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 ZDHHC3Q9NYG2 299 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 TAS2R5Q9NYW4 299 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 OPN4Q9UHM6 478 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 RCE1Q9Y256 329 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 NPFFR2Q9Y5X5 522 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 NAP1L6A6NFF2 107 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 SNRPGP15A8MWD9 76 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 J3QRE1 110 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 SSX5O60225 188 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 HTR1FP30939 366 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 PRMT2P55345 433 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 MAT1AQ00266 395 aaKnown RBP7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 LGALS3BPQ08380 585 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 SMAD2Q15796 467 aaKnown RBP7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 CDKN3Q16667 212 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 SWI5Q1ZZU3 235 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 FAM71E1Q6IPT2 247 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 COMTD1Q86VU5 262 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 FBXO22Q8NEZ5 403 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 OR10K1Q8NGX5 313 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 OR6K3Q8NGY3 331 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 THEM6Q8WUY1 208 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 NEURL3Q96EH8 262 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 BARX1Q9HBU1 254 aaPredicted RBP7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 MYNNQ9NPC7 610 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 CTPS2Q9NRF8 586 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 TAS2R3Q9NYW6 316 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 UNC80Q8N2C7 3258 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 THSD7BQ9C0I4 1608 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 C5orf42Q9H799 3197 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 ANHXE9PGG2 379 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 M0R3H8 397 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 CD53P19397 219 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 PVALBP20472 110 aaPredicted RBP7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 MAPK3P27361 379 aaPredicted RBP7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 ATP6V1E1P36543 226 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 TAF10Q12962 218 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 FGL2Q14314 439 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 MELKQ14680 651 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 SYTL3Q4VX76 610 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 C9orf131Q5VYM1 1079 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 HAGHLQ6PII5 290 aaPredicted RBP7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 ESPNLQ6ZVH7 1005 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 PXKQ7Z7A4 578 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 MEX3DQ86XN8 651 aaKnown RBP7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 ATAD1Q8NBU5 361 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 OR4D9Q8NGE8 314 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 C16orf78Q8WTQ4 265 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 TCEAL4Q96EI5 215 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 ZNF607Q96SK3 696 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 TIMP4Q99727 224 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 PTPN18Q99952 460 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 UTP23Q9BRU9 249 aaKnown RBP7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 DDX31Q9H8H2 851 aaKnown RBP7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 PLEKHA1Q9HB21 404 aa7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 GPN1Q9HCN4 374 aaPredicted RBP7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 GPN3Q9UHW5 284 aaPredicted RBP7.5□□□□□ -1.21
HMGXB4-202ENST00000418170 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms