RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 FAM25GB3EWG6 89 aa13.5□□□□□ -0.25
HDAC9-208ENST00000417496 KLF4O43474 513 aa13.5□□□□□ -0.25
HDAC9-208ENST00000417496 CHRNB1P11230 501 aa13.5□□□□□ -0.25
HDAC9-208ENST00000417496 ELK1P19419 428 aa13.5□□□□□ -0.25
HDAC9-208ENST00000417496 AK4P27144 223 aaPredicted RBP13.5□□□□□ -0.25
HDAC9-208ENST00000417496 SLC16A1P53985 500 aa13.5□□□□□ -0.25
HDAC9-208ENST00000417496 FXYD6P3P58550 94 aa13.5□□□□□ -0.25
HDAC9-208ENST00000417496 SGCGQ13326 291 aa13.5□□□□□ -0.25
HDAC9-208ENST00000417496 DECR1Q16698 335 aa13.5□□□□□ -0.25
HDAC9-208ENST00000417496 KLHL12Q53G59 568 aa13.5□□□□□ -0.25
HDAC9-208ENST00000417496 MBOAT2Q6ZWT7 520 aa13.5□□□□□ -0.25
HDAC9-208ENST00000417496 TMEM99Q8N816 258 aa13.5□□□□□ -0.25
HDAC9-208ENST00000417496 C7orf57Q8NEG2 295 aa13.5□□□□□ -0.25
HDAC9-208ENST00000417496 OR4M2Q8NGB6 313 aa13.5□□□□□ -0.25
HDAC9-208ENST00000417496 OR14C36Q8NHC7 312 aa13.5□□□□□ -0.25
HDAC9-208ENST00000417496 TIMP4Q99727 224 aa13.5□□□□□ -0.25
HDAC9-208ENST00000417496 ISYNA1Q9NPH2 558 aa13.5□□□□□ -0.25
HDAC9-208ENST00000417496 PTGFRNQ9P2B2 879 aa13.5□□□□□ -0.25
HDAC9-208ENST00000417496 ZNF443Q9Y2A4 671 aaPredicted RBP13.5□□□□□ -0.25
HDAC9-208ENST00000417496 WDR45Q9Y484 360 aa13.5□□□□□ -0.25
HDAC9-208ENST00000417496 FAM240BA0A1B0GVZ2 78 aa13.49□□□□□ -0.25
HDAC9-208ENST00000417496 E9PI62 339 aa13.49□□□□□ -0.25
HDAC9-208ENST00000417496 LYRM1O43325 122 aa13.49□□□□□ -0.25
HDAC9-208ENST00000417496 MRPL3P09001 348 aaKnown RBP13.49□□□□□ -0.25
HDAC9-208ENST00000417496 NDUFV2P19404 249 aa13.49□□□□□ -0.25
HDAC9-208ENST00000417496 ALAS2P22557 587 aa13.49□□□□□ -0.25
HDAC9-208ENST00000417496 HTR1FP30939 366 aa13.49□□□□□ -0.25
HDAC9-208ENST00000417496 PRKAR1BP31321 381 aa13.49□□□□□ -0.25
HDAC9-208ENST00000417496 IFNA8P32881 189 aa13.49□□□□□ -0.25
HDAC9-208ENST00000417496 STAT5AP42229 794 aa13.49□□□□□ -0.25
HDAC9-208ENST00000417496 MFSD12Q6NUT3 480 aa13.49□□□□□ -0.25
HDAC9-208ENST00000417496 ZNF836Q6ZNA1 936 aa13.49□□□□□ -0.25
HDAC9-208ENST00000417496 CXXC5Q7LFL8 322 aaKnown RBP13.49□□□□□ -0.25
HDAC9-208ENST00000417496 CCL4L1Q8NHW4 92 aa13.49□□□□□ -0.25
HDAC9-208ENST00000417496 C10orf90Q96M02 699 aa13.49□□□□□ -0.25
HDAC9-208ENST00000417496 MKRN2Q9H000 416 aaKnown RBP13.49□□□□□ -0.25
HDAC9-208ENST00000417496 FGF22Q9HCT0 170 aa13.49□□□□□ -0.25
HDAC9-208ENST00000417496 RBFOX1Q9NWB1 397 aaKnown RBP13.49□□□□□ -0.25
HDAC9-208ENST00000417496 TBC1D29Q9UFV1 150 aa13.49□□□□□ -0.25
HDAC9-208ENST00000417496 CA5BQ9Y2D0 317 aa13.49□□□□□ -0.25
HDAC9-208ENST00000417496 A0A1W2PQU0 124 aa13.49□□□□□ -0.25
HDAC9-208ENST00000417496 LANCL1O43813 399 aa13.49□□□□□ -0.25
HDAC9-208ENST00000417496 CPNE3O75131 537 aaKnown RBP13.49□□□□□ -0.25
HDAC9-208ENST00000417496 MAKP20794 623 aa13.49□□□□□ -0.25
HDAC9-208ENST00000417496 SDHBP21912 280 aa13.49□□□□□ -0.25
HDAC9-208ENST00000417496 SYCE2Q6PIF2 218 aa13.49□□□□□ -0.25
HDAC9-208ENST00000417496 ASB18Q6ZVZ8 466 aa13.49□□□□□ -0.25
HDAC9-208ENST00000417496 MTSS1LQ765P7 747 aa13.49□□□□□ -0.25
HDAC9-208ENST00000417496 RTL10Q7L3V2 364 aa13.49□□□□□ -0.25
HDAC9-208ENST00000417496 DNAJA4Q8WW22 397 aaPredicted RBP13.49□□□□□ -0.25
HDAC9-208ENST00000417496 PLA2G2FQ9BZM2 168 aa13.49□□□□□ -0.25
HDAC9-208ENST00000417496 MUC22E2RYF6 1773 aaPredicted RBP13.49□□□□□ -0.25
HDAC9-208ENST00000417496 PEX12O00623 359 aa13.48□□□□□ -0.25
HDAC9-208ENST00000417496 IGHA1P01876 353 aa13.48□□□□□ -0.25
HDAC9-208ENST00000417496 CLUP10909 449 aa13.48□□□□□ -0.25
HDAC9-208ENST00000417496 ZNF136P52737 540 aa13.48□□□□□ -0.25
HDAC9-208ENST00000417496 OR10A3P58181 314 aa13.48□□□□□ -0.25
HDAC9-208ENST00000417496 ZNF57Q68EA5 555 aaPredicted RBP13.48□□□□□ -0.25
HDAC9-208ENST00000417496 NRROSQ86YC3 692 aa13.48□□□□□ -0.25
HDAC9-208ENST00000417496 MFSD9Q8NBP5 474 aa13.48□□□□□ -0.25
HDAC9-208ENST00000417496 LCN9Q8WX39 176 aa13.48□□□□□ -0.25
HDAC9-208ENST00000417496 MOAP1Q96BY2 351 aa13.48□□□□□ -0.25
HDAC9-208ENST00000417496 TMEM43Q9BTV4 400 aa13.48□□□□□ -0.25
HDAC9-208ENST00000417496 OR52D1Q9H346 318 aa13.48□□□□□ -0.25
HDAC9-208ENST00000417496 CAPN10Q9HC96 672 aa13.48□□□□□ -0.25
HDAC9-208ENST00000417496 ADAP2Q9NPF8 381 aa13.48□□□□□ -0.25
HDAC9-208ENST00000417496 FBXL4Q9UKA2 621 aa13.48□□□□□ -0.25
HDAC9-208ENST00000417496 EXOGQ9Y2C4 368 aaKnown RBP13.48□□□□□ -0.25
HDAC9-208ENST00000417496 GRXCR1A8MXD5 290 aa13.48□□□□□ -0.25
HDAC9-208ENST00000417496 GTPBP1O00178 669 aaKnown RBP13.48□□□□□ -0.25
HDAC9-208ENST00000417496 SCO2O43819 266 aa13.48□□□□□ -0.25
HDAC9-208ENST00000417496 YES1P07947 543 aa13.48□□□□□ -0.25
HDAC9-208ENST00000417496 FAM157BP0CG42 384 aa13.48□□□□□ -0.25
HDAC9-208ENST00000417496 CPN2P22792 545 aa13.48□□□□□ -0.25
HDAC9-208ENST00000417496 HTR2AP28223 471 aa13.48□□□□□ -0.25
HDAC9-208ENST00000417496 TEAD1P28347 426 aa13.48□□□□□ -0.25
HDAC9-208ENST00000417496 SHC1P29353 583 aa13.48□□□□□ -0.25
HDAC9-208ENST00000417496 CMPK1P30085 196 aa13.48□□□□□ -0.25
HDAC9-208ENST00000417496 IGFALSP35858 605 aa13.48□□□□□ -0.25
HDAC9-208ENST00000417496 MLLT3P42568 568 aaPredicted RBP13.48□□□□□ -0.25
HDAC9-208ENST00000417496 AGFG1P52594 562 aaKnown RBP13.48□□□□□ -0.25
HDAC9-208ENST00000417496 SNRPD2P62316 118 aaKnown RBP13.48□□□□□ -0.25
HDAC9-208ENST00000417496 RUNX3Q13761 415 aa13.48□□□□□ -0.25
HDAC9-208ENST00000417496 EFR3AQ14156 821 aa13.48□□□□□ -0.25
HDAC9-208ENST00000417496 PRAMEF8Q5VWM4 474 aa13.48□□□□□ -0.25
HDAC9-208ENST00000417496 PRAMEF7Q5VXH5 474 aa13.48□□□□□ -0.25
HDAC9-208ENST00000417496 ZNF425Q6IV72 752 aa13.48□□□□□ -0.25
HDAC9-208ENST00000417496 RPTNQ6XPR3 784 aa13.48□□□□□ -0.25
HDAC9-208ENST00000417496 LRRC25Q8N386 305 aaPredicted RBP13.48□□□□□ -0.25
HDAC9-208ENST00000417496 ZNF513Q8N8E2 541 aaPredicted RBP13.48□□□□□ -0.25
HDAC9-208ENST00000417496 OR10H4Q8NGA5 316 aa13.48□□□□□ -0.25
HDAC9-208ENST00000417496 SP7Q8TDD2 431 aaPredicted RBP13.48□□□□□ -0.25
HDAC9-208ENST00000417496 KIAA1143Q96AT1 154 aaPredicted RBP13.48□□□□□ -0.25
HDAC9-208ENST00000417496 PRSS27Q9BQR3 290 aa13.48□□□□□ -0.25
HDAC9-208ENST00000417496 TTTY10Q9BZA0 68 aa13.48□□□□□ -0.25
HDAC9-208ENST00000417496 RSPH9Q9H1X1 276 aaPredicted RBP13.48□□□□□ -0.25
HDAC9-208ENST00000417496 OR51V1Q9H2C8 321 aa13.48□□□□□ -0.25
HDAC9-208ENST00000417496 NLGN3Q9NZ94 848 aa13.48□□□□□ -0.25
HDAC9-208ENST00000417496 EXTL2Q9UBQ6 330 aa13.48□□□□□ -0.25
HDAC9-208ENST00000417496 DPP7Q9UHL4 492 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms