RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 ROPN1BQ9BZX4 212 aaPredicted RBP13.6□□□□□ -0.23
UBXN4-203ENST00000416538 C20orf27Q9GZN8 174 aa13.6□□□□□ -0.23
UBXN4-203ENST00000416538 CXXC4Q9H2H0 198 aa13.6□□□□□ -0.23
UBXN4-203ENST00000416538 CXorf36Q9H7Y0 433 aa13.6□□□□□ -0.23
UBXN4-203ENST00000416538 ROPN1Q9HAT0 212 aaPredicted RBP13.6□□□□□ -0.23
UBXN4-203ENST00000416538 PACSIN3Q9UKS6 424 aa13.6□□□□□ -0.23
UBXN4-203ENST00000416538 VDAC3Q9Y277 283 aa13.6□□□□□ -0.23
UBXN4-203ENST00000416538 ROS1P08922 2347 aa13.59□□□□□ -0.23
UBXN4-203ENST00000416538 TTC36A6NLP5 189 aa13.59□□□□□ -0.23
UBXN4-203ENST00000416538 A8MXE2 369 aa13.59□□□□□ -0.23
UBXN4-203ENST00000416538 SIAH2O43255 324 aa13.59□□□□□ -0.23
UBXN4-203ENST00000416538 AQP8O94778 261 aa13.59□□□□□ -0.23
UBXN4-203ENST00000416538 C6orf47O95873 294 aa13.59□□□□□ -0.23
UBXN4-203ENST00000416538 HMGN2P05204 90 aaKnown RBP13.59□□□□□ -0.23
UBXN4-203ENST00000416538 NGFRP08138 427 aa13.59□□□□□ -0.23
UBXN4-203ENST00000416538 EPXP11678 715 aa13.59□□□□□ -0.23
UBXN4-203ENST00000416538 PSMA4P25789 261 aaKnown RBP13.59□□□□□ -0.23
UBXN4-203ENST00000416538 CPOXP36551 454 aa13.59□□□□□ -0.23
UBXN4-203ENST00000416538 HPCAL1P37235 193 aa13.59□□□□□ -0.23
UBXN4-203ENST00000416538 KIR2DL2P43627 348 aaPredicted RBP13.59□□□□□ -0.23
UBXN4-203ENST00000416538 SLC6A8P48029 635 aa13.59□□□□□ -0.23
UBXN4-203ENST00000416538 SERPINB4P48594 390 aa13.59□□□□□ -0.23
UBXN4-203ENST00000416538 PSMD4P55036 377 aaKnown RBP13.59□□□□□ -0.23
UBXN4-203ENST00000416538 MLC1Q15049 377 aa13.59□□□□□ -0.23
UBXN4-203ENST00000416538 POU4F3Q15319 338 aa13.59□□□□□ -0.23
UBXN4-203ENST00000416538 GUSBP1Q15486 140 aa13.59□□□□□ -0.23
UBXN4-203ENST00000416538 CTU2Q2VPK5 515 aaKnown RBP13.59□□□□□ -0.23
UBXN4-203ENST00000416538 BTLAQ7Z6A9 289 aa13.59□□□□□ -0.23
UBXN4-203ENST00000416538 KIF18BQ86Y91 864 aa13.59□□□□□ -0.23
UBXN4-203ENST00000416538 RIMKLAQ8IXN7 391 aa13.59□□□□□ -0.23
UBXN4-203ENST00000416538 METTL25Q8N6Q8 603 aa13.59□□□□□ -0.23
UBXN4-203ENST00000416538 COX18Q8N8Q8 333 aa13.59□□□□□ -0.23
UBXN4-203ENST00000416538 CEP70Q8NHQ1 597 aa13.59□□□□□ -0.23
UBXN4-203ENST00000416538 CDS1Q92903 461 aa13.59□□□□□ -0.23
UBXN4-203ENST00000416538 OPN3Q9H1Y3 402 aaPredicted RBP13.59□□□□□ -0.23
UBXN4-203ENST00000416538 SERHL2Q9H4I8 314 aa13.59□□□□□ -0.23
UBXN4-203ENST00000416538 C3orf14Q9HBI5 128 aa13.59□□□□□ -0.23
UBXN4-203ENST00000416538 SDHAF3Q9NRP4 125 aa13.59□□□□□ -0.23
UBXN4-203ENST00000416538 ZCCHC3Q9NUD5 404 aaKnown RBP13.59□□□□□ -0.23
UBXN4-203ENST00000416538 GPATCH2Q9NW75 528 aa13.59□□□□□ -0.23
UBXN4-203ENST00000416538 MRTO4Q9UKD2 239 aaKnown RBP13.59□□□□□ -0.23
UBXN4-203ENST00000416538 KCNE3Q9Y6H6 103 aa13.59□□□□□ -0.23
UBXN4-203ENST00000416538 HRGP04196 525 aa13.58□□□□□ -0.24
UBXN4-203ENST00000416538 IL11P20809 199 aa13.58□□□□□ -0.24
UBXN4-203ENST00000416538 TBXA2RP21731 343 aa13.58□□□□□ -0.24
UBXN4-203ENST00000416538 CPA2P48052 419 aa13.58□□□□□ -0.24
UBXN4-203ENST00000416538 DIO3P55073 304 aa13.58□□□□□ -0.24
UBXN4-203ENST00000416538 SIRPAP78324 504 aa13.58□□□□□ -0.24
UBXN4-203ENST00000416538 C17orf67Q0P5P2 114 aa13.58□□□□□ -0.24
UBXN4-203ENST00000416538 PON3Q15166 354 aa13.58□□□□□ -0.24
UBXN4-203ENST00000416538 PLPPR5Q32ZL2 321 aa13.58□□□□□ -0.24
UBXN4-203ENST00000416538 VPS26BQ4G0F5 336 aa13.58□□□□□ -0.24
UBXN4-203ENST00000416538 ATP6AP1LQ52LC2 224 aa13.58□□□□□ -0.24
UBXN4-203ENST00000416538 IL23RQ5VWK5 629 aa13.58□□□□□ -0.24
UBXN4-203ENST00000416538 ZNF474Q6S9Z5 364 aaPredicted RBP13.58□□□□□ -0.24
UBXN4-203ENST00000416538 PAMR1Q6UXH9 720 aa13.58□□□□□ -0.24
UBXN4-203ENST00000416538 MEIOBQ8N635 442 aa13.58□□□□□ -0.24
UBXN4-203ENST00000416538 ZNF781Q8N8C0 355 aa13.58□□□□□ -0.24
UBXN4-203ENST00000416538 FNDC5Q8NAU1 212 aa13.58□□□□□ -0.24
UBXN4-203ENST00000416538 PSMA8Q8TAA3 256 aa13.58□□□□□ -0.24
UBXN4-203ENST00000416538 POC1BQ8TC44 478 aa13.58□□□□□ -0.24
UBXN4-203ENST00000416538 JADE3Q92613 823 aa13.58□□□□□ -0.24
UBXN4-203ENST00000416538 NINJ1Q92982 152 aa13.58□□□□□ -0.24
UBXN4-203ENST00000416538 ZNF524Q96C55 264 aa13.58□□□□□ -0.24
UBXN4-203ENST00000416538 DTNBP1Q96EV8 351 aa13.58□□□□□ -0.24
UBXN4-203ENST00000416538 LRRC46Q96FV0 321 aa13.58□□□□□ -0.24
UBXN4-203ENST00000416538 SH3YL1Q96HL8 342 aaPredicted RBP13.58□□□□□ -0.24
UBXN4-203ENST00000416538 ADGRG7Q96K78 797 aa13.58□□□□□ -0.24
UBXN4-203ENST00000416538 PTGES2Q9H7Z7 377 aa13.58□□□□□ -0.24
UBXN4-203ENST00000416538 PLEKHF2Q9H8W4 249 aa13.58□□□□□ -0.24
UBXN4-203ENST00000416538 RNF122Q9H9V4 155 aa13.58□□□□□ -0.24
UBXN4-203ENST00000416538 EML4Q9HC35 981 aaKnown RBP13.58□□□□□ -0.24
UBXN4-203ENST00000416538 TESMINQ9Y4I5 508 aa13.58□□□□□ -0.24
UBXN4-203ENST00000416538 A0A1W2PRB8 838 aa13.57□□□□□ -0.24
UBXN4-203ENST00000416538 SH3D21A4FU49 640 aa13.57□□□□□ -0.24
UBXN4-203ENST00000416538 TMEM114B3SHH9 223 aa13.57□□□□□ -0.24
UBXN4-203ENST00000416538 NDUFB5O43674 189 aa13.57□□□□□ -0.24
UBXN4-203ENST00000416538 CGAP01215 116 aa13.57□□□□□ -0.24
UBXN4-203ENST00000416538 ALOX5P09917 674 aa13.57□□□□□ -0.24
UBXN4-203ENST00000416538 DHRS4L1P0CG22 281 aa13.57□□□□□ -0.24
UBXN4-203ENST00000416538 G6PDP11413 515 aa13.57□□□□□ -0.24
UBXN4-203ENST00000416538 SHC1P29353 583 aa13.57□□□□□ -0.24
UBXN4-203ENST00000416538 SERPINB5P36952 375 aa13.57□□□□□ -0.24
UBXN4-203ENST00000416538 PRIM2P49643 509 aa13.57□□□□□ -0.24
UBXN4-203ENST00000416538 FAM27E3Q08E93 113 aa13.57□□□□□ -0.24
UBXN4-203ENST00000416538 MPP2Q14168 576 aa13.57□□□□□ -0.24
UBXN4-203ENST00000416538 KRT71Q3SY84 523 aa13.57□□□□□ -0.24
UBXN4-203ENST00000416538 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.57□□□□□ -0.24
UBXN4-203ENST00000416538 CDC73Q6P1J9 531 aa13.57□□□□□ -0.24
UBXN4-203ENST00000416538 LRIG3Q6UXM1 1119 aa13.57□□□□□ -0.24
UBXN4-203ENST00000416538 P4HA3Q7Z4N8 544 aa13.57□□□□□ -0.24
UBXN4-203ENST00000416538 R3HCC1LQ7Z5L2 792 aaKnown RBP13.57□□□□□ -0.24
UBXN4-203ENST00000416538 LSRQ86X29 649 aaPredicted RBP13.57□□□□□ -0.24
UBXN4-203ENST00000416538 CNEP1R1Q8N9A8 125 aa13.57□□□□□ -0.24
UBXN4-203ENST00000416538 OR5AK3PQ8NH89 298 aa13.57□□□□□ -0.24
UBXN4-203ENST00000416538 COQ8BQ96D53 544 aa13.57□□□□□ -0.24
UBXN4-203ENST00000416538 PPP1R36Q96LQ0 422 aa13.57□□□□□ -0.24
UBXN4-203ENST00000416538 SORT1Q99523 831 aa13.57□□□□□ -0.24
UBXN4-203ENST00000416538 FOXC2Q99958 501 aa13.57□□□□□ -0.24
UBXN4-203ENST00000416538 PIGQQ9BRB3 760 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms