RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 GRIP2Q9C0E4 1043 aa13.73□□□□□ -0.21
DDX56-202ENST00000415758 SLCO5A1Q9H2Y9 848 aa13.73□□□□□ -0.21
DDX56-202ENST00000415758 GLIPR2Q9H4G4 154 aa13.73□□□□□ -0.21
DDX56-202ENST00000415758 C3orf14Q9HBI5 128 aa13.73□□□□□ -0.21
DDX56-202ENST00000415758 LRTM1Q9HBL6 345 aa13.73□□□□□ -0.21
DDX56-202ENST00000415758 NGBQ9NPG2 151 aa13.73□□□□□ -0.21
DDX56-202ENST00000415758 DDX18Q9NVP1 670 aaKnown RBP13.73□□□□□ -0.21
DDX56-202ENST00000415758 VDAC3Q9Y277 283 aa13.73□□□□□ -0.21
DDX56-202ENST00000415758 WBP11Q9Y2W2 641 aaKnown RBP13.73□□□□□ -0.21
DDX56-202ENST00000415758 SNX8Q9Y5X2 465 aa13.73□□□□□ -0.21
DDX56-202ENST00000415758 CADP27708 2225 aa13.72□□□□□ -0.21
DDX56-202ENST00000415758 FREM1Q5H8C1 2179 aa13.72□□□□□ -0.21
DDX56-202ENST00000415758 SYNGR4O95473 234 aa13.72□□□□□ -0.21
DDX56-202ENST00000415758 IGKV1D-16P01601 117 aa13.72□□□□□ -0.21
DDX56-202ENST00000415758 TUBBP07437 444 aa13.72□□□□□ -0.21
DDX56-202ENST00000415758 CD3EP07766 207 aa13.72□□□□□ -0.21
DDX56-202ENST00000415758 IMPDH1P20839 514 aa13.72□□□□□ -0.21
DDX56-202ENST00000415758 ADH6P28332 368 aa13.72□□□□□ -0.21
DDX56-202ENST00000415758 HMOX2P30519 316 aa13.72□□□□□ -0.21
DDX56-202ENST00000415758 ACVR1BP36896 505 aa13.72□□□□□ -0.21
DDX56-202ENST00000415758 HTR6P50406 440 aa13.72□□□□□ -0.21
DDX56-202ENST00000415758 C2orf80Q0P641 193 aa13.72□□□□□ -0.21
DDX56-202ENST00000415758 GRAMD1BQ3KR37 738 aa13.72□□□□□ -0.21
DDX56-202ENST00000415758 ZNF672Q499Z4 452 aaPredicted RBP13.72□□□□□ -0.21
DDX56-202ENST00000415758 CPTPQ5TA50 214 aa13.72□□□□□ -0.21
DDX56-202ENST00000415758 FAM71E1Q6IPT2 247 aa13.72□□□□□ -0.21
DDX56-202ENST00000415758 PPP4R4Q6NUP7 873 aa13.72□□□□□ -0.21
DDX56-202ENST00000415758 HSD17B8Q92506 261 aa13.72□□□□□ -0.21
DDX56-202ENST00000415758 AMDHD1Q96NU7 426 aa13.72□□□□□ -0.21
DDX56-202ENST00000415758 NPAS1Q99742 590 aa13.72□□□□□ -0.21
DDX56-202ENST00000415758 USB1Q9BQ65 265 aaKnown RBP13.72□□□□□ -0.21
DDX56-202ENST00000415758 EBPLQ9BY08 206 aa13.72□□□□□ -0.21
DDX56-202ENST00000415758 ESRP2Q9H6T0 727 aaKnown RBP13.72□□□□□ -0.21
DDX56-202ENST00000415758 YAE1D1Q9NRH1 226 aa13.72□□□□□ -0.21
DDX56-202ENST00000415758 ZNF180Q9UJW8 692 aa13.72□□□□□ -0.21
DDX56-202ENST00000415758 LIPT1Q9Y234 373 aa13.72□□□□□ -0.21
DDX56-202ENST00000415758 MAGED1Q9Y5V3 778 aaPredicted RBP13.72□□□□□ -0.21
DDX56-202ENST00000415758 A0A0J9YW62 118 aa13.71□□□□□ -0.21
DDX56-202ENST00000415758 ESYT3A0FGR9 886 aa13.71□□□□□ -0.21
DDX56-202ENST00000415758 TNFSF11O14788 317 aa13.71□□□□□ -0.21
DDX56-202ENST00000415758 NDUFB5O43674 189 aa13.71□□□□□ -0.21
DDX56-202ENST00000415758 KCNH1O95259 989 aa13.71□□□□□ -0.21
DDX56-202ENST00000415758 IGHV4-39P01824 125 aa13.71□□□□□ -0.21
DDX56-202ENST00000415758 ENO1P06733 434 aaKnown RBP13.71□□□□□ -0.21
DDX56-202ENST00000415758 PABPC4LP0CB38 370 aaKnown RBP13.71□□□□□ -0.21
DDX56-202ENST00000415758 GABRA3P34903 492 aa13.71□□□□□ -0.21
DDX56-202ENST00000415758 CDKN1AP38936 164 aa13.71□□□□□ -0.21
DDX56-202ENST00000415758 SLC29A2Q14542 456 aa13.71□□□□□ -0.21
DDX56-202ENST00000415758 PGGHGQ32M88 737 aa13.71□□□□□ -0.21
DDX56-202ENST00000415758 PLPPR5Q32ZL2 321 aa13.71□□□□□ -0.21
DDX56-202ENST00000415758 PDSS1Q5T2R2 415 aa13.71□□□□□ -0.21
DDX56-202ENST00000415758 SFRP5Q5T4F7 317 aa13.71□□□□□ -0.21
DDX56-202ENST00000415758 HBMQ6B0K9 141 aa13.71□□□□□ -0.21
DDX56-202ENST00000415758 FIGNL1Q6PIW4 674 aa13.71□□□□□ -0.21
DDX56-202ENST00000415758 OR4C3Q8NH37 302 aa13.71□□□□□ -0.21
DDX56-202ENST00000415758 OSTF1Q92882 214 aa13.71□□□□□ -0.21
DDX56-202ENST00000415758 GTPBP3Q969Y2 492 aaKnown RBP13.71□□□□□ -0.21
DDX56-202ENST00000415758 ZBED6CLQ96FA7 236 aaPredicted RBP13.71□□□□□ -0.21
DDX56-202ENST00000415758 TMEM237Q96Q45 408 aa13.71□□□□□ -0.21
DDX56-202ENST00000415758 PAFAH2Q99487 392 aa13.71□□□□□ -0.21
DDX56-202ENST00000415758 GP6Q9HCN6 339 aa13.71□□□□□ -0.21
DDX56-202ENST00000415758 MYNNQ9NPC7 610 aa13.71□□□□□ -0.21
DDX56-202ENST00000415758 MIEF1Q9NQG6 463 aa13.71□□□□□ -0.21
DDX56-202ENST00000415758 FBXO34Q9NWN3 711 aa13.71□□□□□ -0.21
DDX56-202ENST00000415758 STK38LQ9Y2H1 464 aa13.71□□□□□ -0.21
DDX56-202ENST00000415758 NBEAL1Q6ZS30 2694 aa13.71□□□□□ -0.22
DDX56-202ENST00000415758 A0A1W2PRB8 838 aa13.7□□□□□ -0.22
DDX56-202ENST00000415758 GXYLT2A0PJZ3 443 aa13.7□□□□□ -0.22
DDX56-202ENST00000415758 CCDC151A5D8V7 595 aa13.7□□□□□ -0.22
DDX56-202ENST00000415758 TRIM49D1C9J1S8 452 aa13.7□□□□□ -0.22
DDX56-202ENST00000415758 GMFGO60234 142 aa13.7□□□□□ -0.22
DDX56-202ENST00000415758 NKX2-2O95096 273 aa13.7□□□□□ -0.22
DDX56-202ENST00000415758 OPN1LWP04000 364 aa13.7□□□□□ -0.22
DDX56-202ENST00000415758 FESP07332 822 aa13.7□□□□□ -0.22
DDX56-202ENST00000415758 TAC1P20366 129 aa13.7□□□□□ -0.22
DDX56-202ENST00000415758 NTSP30990 170 aa13.7□□□□□ -0.22
DDX56-202ENST00000415758 RFX3P48380 749 aa13.7□□□□□ -0.22
DDX56-202ENST00000415758 PKNOX1P55347 436 aa13.7□□□□□ -0.22
DDX56-202ENST00000415758 CARD18P57730 90 aa13.7□□□□□ -0.22
DDX56-202ENST00000415758 BTKQ06187 659 aa13.7□□□□□ -0.22
DDX56-202ENST00000415758 RNPS1Q15287 305 aaKnown RBP13.7□□□□□ -0.22
DDX56-202ENST00000415758 TAB1Q15750 504 aa13.7□□□□□ -0.22
DDX56-202ENST00000415758 CHRFAM7AQ494W8 412 aa13.7□□□□□ -0.22
DDX56-202ENST00000415758 SEZ6L2Q6UXD5 910 aa13.7□□□□□ -0.22
DDX56-202ENST00000415758 TFAP2EQ6VUC0 442 aa13.7□□□□□ -0.22
DDX56-202ENST00000415758 ZNF572Q7Z3I7 529 aaPredicted RBP13.7□□□□□ -0.22
DDX56-202ENST00000415758 TRABD2AQ86V40 505 aa13.7□□□□□ -0.22
DDX56-202ENST00000415758 FAM76AQ8TAV0 307 aa13.7□□□□□ -0.22
DDX56-202ENST00000415758 FAM110BQ8TC76 370 aa13.7□□□□□ -0.22
DDX56-202ENST00000415758 RNF128Q8TEB7 428 aa13.7□□□□□ -0.22
DDX56-202ENST00000415758 DCAKDQ8WVC6 231 aa13.7□□□□□ -0.22
DDX56-202ENST00000415758 SLC9A6Q92581 669 aa13.7□□□□□ -0.22
DDX56-202ENST00000415758 RNF145Q96MT1 663 aa13.7□□□□□ -0.22
DDX56-202ENST00000415758 C12orf49Q9H741 205 aa13.7□□□□□ -0.22
DDX56-202ENST00000415758 MED17Q9NVC6 651 aa13.7□□□□□ -0.22
DDX56-202ENST00000415758 TIMM22Q9Y584 194 aa13.7□□□□□ -0.22
DDX56-202ENST00000415758 A0A1W2PP18 115 aa13.69□□□□□ -0.22
DDX56-202ENST00000415758 A8MV72 311 aaPredicted RBP13.69□□□□□ -0.22
DDX56-202ENST00000415758 CLOCKO15516 846 aa13.69□□□□□ -0.22
DDX56-202ENST00000415758 DLX3O60479 287 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms