RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 RAB39AQ14964 217 aa11.22□□□□□ -0.61
PTPRF-205ENST00000414879 LRRC69Q6ZNQ3 347 aa11.22□□□□□ -0.61
PTPRF-205ENST00000414879 CHERPQ8IWX8 916 aaKnown RBP11.22□□□□□ -0.61
PTPRF-205ENST00000414879 PAPD5Q8NDF8 572 aaKnown RBP11.22□□□□□ -0.61
PTPRF-205ENST00000414879 TMEM203Q969S6 136 aa11.22□□□□□ -0.61
PTPRF-205ENST00000414879 TM4SF18Q96CE8 201 aa11.22□□□□□ -0.61
PTPRF-205ENST00000414879 SLC6A18Q96N87 628 aa11.22□□□□□ -0.61
PTPRF-205ENST00000414879 ACTR6Q9GZN1 396 aa11.22□□□□□ -0.61
PTPRF-205ENST00000414879 FGF22Q9HCT0 170 aa11.22□□□□□ -0.61
PTPRF-205ENST00000414879 TRBV2A0A0J9YWF9 115 aa11.22□□□□□ -0.61
PTPRF-205ENST00000414879 A0A1B0GX78 115 aa11.22□□□□□ -0.61
PTPRF-205ENST00000414879 CD46P15529 392 aa11.22□□□□□ -0.61
PTPRF-205ENST00000414879 ELK4P28324 431 aa11.22□□□□□ -0.61
PTPRF-205ENST00000414879 TGFBR3Q03167 851 aa11.22□□□□□ -0.61
PTPRF-205ENST00000414879 PLEKHN1Q494U1 663 aaPredicted RBP11.22□□□□□ -0.61
PTPRF-205ENST00000414879 TRIM61Q5EBN2 209 aa11.22□□□□□ -0.61
PTPRF-205ENST00000414879 LEG1Q6P5S2 330 aa11.22□□□□□ -0.61
PTPRF-205ENST00000414879 INIPQ9NRY2 104 aa11.22□□□□□ -0.61
PTPRF-205ENST00000414879 TAS2R8Q9NYW2 309 aa11.22□□□□□ -0.61
PTPRF-205ENST00000414879 C5AR2Q9P296 337 aa11.22□□□□□ -0.61
PTPRF-205ENST00000414879 PPT2Q9UMR5 302 aa11.22□□□□□ -0.61
PTPRF-205ENST00000414879 EFCAB7A8K855 629 aa11.22□□□□□ -0.61
PTPRF-205ENST00000414879 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.22□□□□□ -0.61
PTPRF-205ENST00000414879 PLD2O14939 933 aa11.22□□□□□ -0.61
PTPRF-205ENST00000414879 ZNF264O43296 627 aa11.22□□□□□ -0.61
PTPRF-205ENST00000414879 CDK4P11802 303 aa11.22□□□□□ -0.61
PTPRF-205ENST00000414879 MTHFD2P13995 350 aa11.22□□□□□ -0.61
PTPRF-205ENST00000414879 PGAM2P15259 253 aa11.22□□□□□ -0.61
PTPRF-205ENST00000414879 PYCR1P32322 319 aa11.22□□□□□ -0.61
PTPRF-205ENST00000414879 EIF1P41567 113 aaKnown RBP11.22□□□□□ -0.61
PTPRF-205ENST00000414879 MAZP56270 477 aaKnown RBP11.22□□□□□ -0.61
PTPRF-205ENST00000414879 UBE2NP61088 152 aaKnown RBP11.22□□□□□ -0.61
PTPRF-205ENST00000414879 TSPAN31Q12999 210 aa11.22□□□□□ -0.61
PTPRF-205ENST00000414879 EIF5AL1Q6IS14 154 aaKnown RBP11.22□□□□□ -0.61
PTPRF-205ENST00000414879 RFLNAQ6ZTI6 216 aa11.22□□□□□ -0.61
PTPRF-205ENST00000414879 CARFQ8N187 725 aa11.22□□□□□ -0.61
PTPRF-205ENST00000414879 NKD1Q969G9 470 aa11.22□□□□□ -0.61
PTPRF-205ENST00000414879 BPIFA2Q96DR5 249 aa11.22□□□□□ -0.61
PTPRF-205ENST00000414879 LCORQ96JN0 433 aaPredicted RBP11.22□□□□□ -0.61
PTPRF-205ENST00000414879 MRGPRX1Q96LB2 322 aa11.22□□□□□ -0.61
PTPRF-205ENST00000414879 GAREM1Q9H706 876 aa11.22□□□□□ -0.61
PTPRF-205ENST00000414879 ETAA1Q9NY74 926 aa11.22□□□□□ -0.61
PTPRF-205ENST00000414879 ERVK-18Q9QC07 812 aa11.22□□□□□ -0.61
PTPRF-205ENST00000414879 PVRP15151 417 aa11.21□□□□□ -0.61
PTPRF-205ENST00000414879 MZT1Q08AG7 82 aa11.21□□□□□ -0.61
PTPRF-205ENST00000414879 ZNF782Q6ZMW2 699 aaPredicted RBP11.21□□□□□ -0.61
PTPRF-205ENST00000414879 TREX2Q9BQ50 279 aaPredicted RBP11.21□□□□□ -0.61
PTPRF-205ENST00000414879 SRA1Q9HD15 236 aaKnown RBP11.21□□□□□ -0.61
PTPRF-205ENST00000414879 RAB9BQ9NP90 201 aa11.21□□□□□ -0.61
PTPRF-205ENST00000414879 FAM172BPA6NC97 362 aa11.21□□□□□ -0.61
PTPRF-205ENST00000414879 XPNPEP2O43895 674 aa11.21□□□□□ -0.61
PTPRF-205ENST00000414879 PRPH2P23942 346 aa11.21□□□□□ -0.61
PTPRF-205ENST00000414879 TRHRP34981 398 aaPredicted RBP11.21□□□□□ -0.61
PTPRF-205ENST00000414879 WNT4P56705 351 aa11.21□□□□□ -0.61
PTPRF-205ENST00000414879 SWI5Q1ZZU3 235 aa11.21□□□□□ -0.61
PTPRF-205ENST00000414879 PAQR7Q86WK9 346 aa11.21□□□□□ -0.61
PTPRF-205ENST00000414879 ASB17Q8WXJ9 295 aa11.21□□□□□ -0.61
PTPRF-205ENST00000414879 LGALS12Q96DT0 336 aa11.21□□□□□ -0.61
PTPRF-205ENST00000414879 DUSP22Q9NRW4 184 aa11.21□□□□□ -0.61
PTPRF-205ENST00000414879 CLEC4EQ9ULY5 219 aa11.21□□□□□ -0.61
PTPRF-205ENST00000414879 H0YIG0 161 aa11.21□□□□□ -0.61
PTPRF-205ENST00000414879 M0R3H8 397 aa11.21□□□□□ -0.61
PTPRF-205ENST00000414879 LDB3O75112 727 aa11.21□□□□□ -0.61
PTPRF-205ENST00000414879 UCHL1P09936 223 aa11.21□□□□□ -0.61
PTPRF-205ENST00000414879 GPR3P46089 330 aa11.21□□□□□ -0.61
PTPRF-205ENST00000414879 PCBD1P61457 104 aa11.21□□□□□ -0.61
PTPRF-205ENST00000414879 PIN1Q13526 163 aaPredicted RBP11.21□□□□□ -0.61
PTPRF-205ENST00000414879 PIP5KL1Q5T9C9 394 aa11.21□□□□□ -0.61
PTPRF-205ENST00000414879 CEACAM19Q7Z692 300 aa11.21□□□□□ -0.61
PTPRF-205ENST00000414879 SLC37A2Q8TED4 501 aa11.21□□□□□ -0.61
PTPRF-205ENST00000414879 FRMD6Q96NE9 622 aa11.21□□□□□ -0.61
PTPRF-205ENST00000414879 THSD1Q9NS62 852 aa11.21□□□□□ -0.61
PTPRF-205ENST00000414879 ABCD2Q9UBJ2 740 aa11.21□□□□□ -0.61
PTPRF-205ENST00000414879 C14orf166Q9Y224 244 aaKnown RBP11.21□□□□□ -0.61
PTPRF-205ENST00000414879 SLC17A4Q9Y2C5 497 aa11.21□□□□□ -0.61
PTPRF-205ENST00000414879 ASB4Q9Y574 426 aa11.21□□□□□ -0.61
PTPRF-205ENST00000414879 CORINQ9Y5Q5 1042 aa11.21□□□□□ -0.61
PTPRF-205ENST00000414879 PRAMEF33A0A0G2JMD5 474 aa11.21□□□□□ -0.62
PTPRF-205ENST00000414879 LILRA5A6NI73 299 aa11.21□□□□□ -0.62
PTPRF-205ENST00000414879 PRAMEF10O60809 474 aa11.21□□□□□ -0.62
PTPRF-205ENST00000414879 C17orf67Q0P5P2 114 aa11.21□□□□□ -0.62
PTPRF-205ENST00000414879 HYAL1Q12794 435 aa11.21□□□□□ -0.62
PTPRF-205ENST00000414879 APOFQ13790 326 aa11.21□□□□□ -0.62
PTPRF-205ENST00000414879 ZNF181Q2M3W8 571 aa11.21□□□□□ -0.62
PTPRF-205ENST00000414879 C9orf50Q5SZB4 431 aa11.21□□□□□ -0.62
PTPRF-205ENST00000414879 VRK3Q8IV63 474 aa11.21□□□□□ -0.62
PTPRF-205ENST00000414879 GRPEL2Q8TAA5 225 aa11.21□□□□□ -0.62
PTPRF-205ENST00000414879 FCAMRQ8WWV6 532 aa11.21□□□□□ -0.62
PTPRF-205ENST00000414879 TFAP2CQ92754 450 aa11.21□□□□□ -0.62
PTPRF-205ENST00000414879 EGLN2Q96KS0 407 aa11.21□□□□□ -0.62
PTPRF-205ENST00000414879 AMDHD1Q96NU7 426 aa11.21□□□□□ -0.62
PTPRF-205ENST00000414879 OR52A5Q9H2C5 316 aa11.21□□□□□ -0.62
PTPRF-205ENST00000414879 PADI1Q9ULC6 663 aa11.21□□□□□ -0.62
PTPRF-205ENST00000414879 DICER1Q9UPY3 1922 aaKnown RBP11.21□□□□□ -0.62
PTPRF-205ENST00000414879 ZNF878C9JN71 531 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 ANXA3P12429 323 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 OPRD1P41143 372 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 CCR2P41597 374 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 PGFP49763 221 aa11.2□□□□□ -0.62
PTPRF-205ENST00000414879 ARPC4P59998 168 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms