RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 RAB40ALP0C0E4 278 aa14.36□□□□□ -0.11
SHMT2-202ENST00000414700 NR2F1P10589 423 aa14.36□□□□□ -0.11
SHMT2-202ENST00000414700 TCEA1P23193 301 aaKnown RBP14.36□□□□□ -0.11
SHMT2-202ENST00000414700 KDELR2P33947 212 aa14.36□□□□□ -0.11
SHMT2-202ENST00000414700 GABRA3P34903 492 aa14.36□□□□□ -0.11
SHMT2-202ENST00000414700 RBBP4Q09028 425 aa14.36□□□□□ -0.11
SHMT2-202ENST00000414700 SPCS2Q15005 226 aa14.36□□□□□ -0.11
SHMT2-202ENST00000414700 ZNF630Q2M218 657 aaPredicted RBP14.36□□□□□ -0.11
SHMT2-202ENST00000414700 PLEKHG7Q6ZR37 379 aa14.36□□□□□ -0.11
SHMT2-202ENST00000414700 PROSER1Q86XN7 944 aa14.36□□□□□ -0.11
SHMT2-202ENST00000414700 B3GNT7Q8NFL0 401 aa14.36□□□□□ -0.11
SHMT2-202ENST00000414700 GPR151Q8TDV0 419 aa14.36□□□□□ -0.11
SHMT2-202ENST00000414700 VMP1Q96GC9 406 aa14.36□□□□□ -0.11
SHMT2-202ENST00000414700 NSMCE2Q96MF7 247 aa14.36□□□□□ -0.11
SHMT2-202ENST00000414700 LPAR4Q99677 370 aa14.36□□□□□ -0.11
SHMT2-202ENST00000414700 TREX2Q9BQ50 279 aaPredicted RBP14.36□□□□□ -0.11
SHMT2-202ENST00000414700 QRSL1Q9H0R6 528 aaKnown RBP14.36□□□□□ -0.11
SHMT2-202ENST00000414700 MUC13Q9H3R2 512 aa14.36□□□□□ -0.11
SHMT2-202ENST00000414700 PIGUQ9H490 435 aa14.36□□□□□ -0.11
SHMT2-202ENST00000414700 IL17BQ9UHF5 180 aa14.36□□□□□ -0.11
SHMT2-202ENST00000414700 PADI2Q9Y2J8 665 aa14.36□□□□□ -0.11
SHMT2-202ENST00000414700 LOC102723996A0A087X1L8 192 aa14.36□□□□□ -0.11
SHMT2-202ENST00000414700 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.36□□□□□ -0.11
SHMT2-202ENST00000414700 SOCS6O14544 535 aa14.36□□□□□ -0.11
SHMT2-202ENST00000414700 ASNA1O43681 348 aa14.36□□□□□ -0.11
SHMT2-202ENST00000414700 TPST1O60507 370 aa14.36□□□□□ -0.11
SHMT2-202ENST00000414700 MMP11P24347 488 aa14.36□□□□□ -0.11
SHMT2-202ENST00000414700 OTX2P32243 289 aa14.36□□□□□ -0.11
SHMT2-202ENST00000414700 TPTEP56180 551 aa14.36□□□□□ -0.11
SHMT2-202ENST00000414700 PCBP3P57721 371 aaKnown RBP14.36□□□□□ -0.11
SHMT2-202ENST00000414700 RPS15P62841 145 aaKnown RBP14.36□□□□□ -0.11
SHMT2-202ENST00000414700 IL10RAQ13651 578 aa14.36□□□□□ -0.11
SHMT2-202ENST00000414700 PCOLCEQ15113 449 aa14.36□□□□□ -0.11
SHMT2-202ENST00000414700 HEPHL1Q6MZM0 1159 aa14.36□□□□□ -0.11
SHMT2-202ENST00000414700 REEP3Q6NUK4 255 aa14.36□□□□□ -0.11
SHMT2-202ENST00000414700 ENPP6Q6UWR7 440 aa14.36□□□□□ -0.11
SHMT2-202ENST00000414700 IL22RA1Q8N6P7 574 aa14.36□□□□□ -0.11
SHMT2-202ENST00000414700 MORN4Q8NDC4 146 aa14.36□□□□□ -0.11
SHMT2-202ENST00000414700 OR7G1Q8NGA0 311 aa14.36□□□□□ -0.11
SHMT2-202ENST00000414700 ZG16BQ96DA0 208 aa14.36□□□□□ -0.11
SHMT2-202ENST00000414700 GAL3ST4Q96RP7 486 aa14.36□□□□□ -0.11
SHMT2-202ENST00000414700 LMF2Q9BU23 707 aaKnown RBP14.36□□□□□ -0.11
SHMT2-202ENST00000414700 MOV10Q9HCE1 1003 aaKnown RBP14.36□□□□□ -0.11
SHMT2-202ENST00000414700 DUSP22Q9NRW4 184 aa14.36□□□□□ -0.11
SHMT2-202ENST00000414700 IGHV1-45A0A0A0MS14 117 aa14.35□□□□□ -0.11
SHMT2-202ENST00000414700 CDC14CA4D256 554 aa14.35□□□□□ -0.11
SHMT2-202ENST00000414700 TRABD2BA6NFA1 517 aa14.35□□□□□ -0.11
SHMT2-202ENST00000414700 DUXAA6NLW8 204 aa14.35□□□□□ -0.11
SHMT2-202ENST00000414700 TMEM229AB2RXF0 380 aa14.35□□□□□ -0.11
SHMT2-202ENST00000414700 NKX2-2O95096 273 aa14.35□□□□□ -0.11
SHMT2-202ENST00000414700 CELA2AP08217 269 aa14.35□□□□□ -0.11
SHMT2-202ENST00000414700 COX6A1P12074 109 aa14.35□□□□□ -0.11
SHMT2-202ENST00000414700 AQP6Q13520 282 aa14.35□□□□□ -0.11
SHMT2-202ENST00000414700 EBPQ15125 230 aaKnown RBP14.35□□□□□ -0.11
SHMT2-202ENST00000414700 GPAT3Q53EU6 434 aa14.35□□□□□ -0.11
SHMT2-202ENST00000414700 ZCCHC12Q6PEW1 402 aa14.35□□□□□ -0.11
SHMT2-202ENST00000414700 FIGNL1Q6PIW4 674 aa14.35□□□□□ -0.11
SHMT2-202ENST00000414700 C16orf47Q6ZP98 133 aaPredicted RBP14.35□□□□□ -0.11
SHMT2-202ENST00000414700 C16orf62Q7Z3J2 963 aa14.35□□□□□ -0.11
SHMT2-202ENST00000414700 COX18Q8N8Q8 333 aa14.35□□□□□ -0.11
SHMT2-202ENST00000414700 OR11G2Q8NGC1 345 aa14.35□□□□□ -0.11
SHMT2-202ENST00000414700 SLC38A1Q9H2H9 487 aa14.35□□□□□ -0.11
SHMT2-202ENST00000414700 DCAF13Q9NV06 445 aaKnown RBP14.35□□□□□ -0.11
SHMT2-202ENST00000414700 WDR70Q9NW82 654 aa14.35□□□□□ -0.11
SHMT2-202ENST00000414700 COPS7AQ9UBW8 275 aa14.35□□□□□ -0.11
SHMT2-202ENST00000414700 C19orf25Q9UFG5 118 aaPredicted RBP14.35□□□□□ -0.11
SHMT2-202ENST00000414700 DOCK10Q96BY6 2186 aa14.35□□□□□ -0.11
SHMT2-202ENST00000414700 ANKRD34BA5PLL1 514 aa14.34□□□□□ -0.11
SHMT2-202ENST00000414700 C5orf58C9J3I9 102 aa14.34□□□□□ -0.11
SHMT2-202ENST00000414700 M0QX08 132 aa14.34□□□□□ -0.11
SHMT2-202ENST00000414700 RGS13O14921 159 aa14.34□□□□□ -0.11
SHMT2-202ENST00000414700 BCAS1O75363 584 aaPredicted RBP14.34□□□□□ -0.11
SHMT2-202ENST00000414700 DXOO77932 396 aaKnown RBP14.34□□□□□ -0.11
SHMT2-202ENST00000414700 SNAP29O95721 258 aa14.34□□□□□ -0.11
SHMT2-202ENST00000414700 CYC1P08574 325 aa14.34□□□□□ -0.11
SHMT2-202ENST00000414700 RFX3P48380 749 aa14.34□□□□□ -0.11
SHMT2-202ENST00000414700 ANXA11P50995 505 aaKnown RBP14.34□□□□□ -0.11
SHMT2-202ENST00000414700 SLC26A5P58743 744 aa14.34□□□□□ -0.11
SHMT2-202ENST00000414700 SRSF6Q13247 344 aaKnown RBP14.34□□□□□ -0.11
SHMT2-202ENST00000414700 RTP5Q14D33 572 aa14.34□□□□□ -0.11
SHMT2-202ENST00000414700 RBM48Q5RL73 367 aaKnown RBP14.34□□□□□ -0.11
SHMT2-202ENST00000414700 IGF2-ASQ6U949 168 aa14.34□□□□□ -0.11
SHMT2-202ENST00000414700 PPP1R32Q7Z5V6 425 aa14.34□□□□□ -0.11
SHMT2-202ENST00000414700 ZAR1Q86SH2 424 aa14.34□□□□□ -0.11
SHMT2-202ENST00000414700 C7orf57Q8NEG2 295 aa14.34□□□□□ -0.11
SHMT2-202ENST00000414700 THAP3Q8WTV1 239 aaPredicted RBP14.34□□□□□ -0.11
SHMT2-202ENST00000414700 ADIPOR1Q96A54 375 aa14.34□□□□□ -0.11
SHMT2-202ENST00000414700 ART5Q96L15 291 aa14.34□□□□□ -0.11
SHMT2-202ENST00000414700 STACQ99469 402 aa14.34□□□□□ -0.11
SHMT2-202ENST00000414700 SDF2Q99470 211 aa14.34□□□□□ -0.11
SHMT2-202ENST00000414700 NXF5Q9H1B4 397 aaKnown RBP14.34□□□□□ -0.11
SHMT2-202ENST00000414700 THUMPD1Q9NXG2 353 aaKnown RBP14.34□□□□□ -0.11
SHMT2-202ENST00000414700 MED13Q9UHV7 2174 aa14.34□□□□□ -0.11
SHMT2-202ENST00000414700 ENPP5Q9UJA9 477 aa14.34□□□□□ -0.11
SHMT2-202ENST00000414700 MKLN1Q9UL63 735 aa14.34□□□□□ -0.11
SHMT2-202ENST00000414700 GPR55Q9Y2T6 319 aaPredicted RBP14.34□□□□□ -0.11
SHMT2-202ENST00000414700 APC2O95996 2303 aa14.34□□□□□ -0.11
SHMT2-202ENST00000414700 C21orf140B9A014 251 aa14.34□□□□□ -0.11
SHMT2-202ENST00000414700 DEAF1O75398 565 aaPredicted RBP14.34□□□□□ -0.11
SHMT2-202ENST00000414700 PRKD3O94806 890 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms