RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 GALNTL6Q49A17 601 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 ARL13AQ5H913 290 aaPredicted RBP4.5□□□□□ -1.69
VPS41-205ENST00000414632 ZNF766Q5HY98 468 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 ACSM2BQ68CK6 577 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 OR52E8Q6IFG1 317 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 ANKRD26P1Q6NSI1 321 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 H3F3CQ6NXT2 135 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 MZT2BQ6NZ67 158 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 CFAP161Q6P656 301 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 IGFL2Q6UWQ7 119 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 IGFL3Q6UXB1 125 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 LRIG3Q6UXM1 1119 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 ZGRF1Q86YA3 2104 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 NUDCD3Q8IVD9 361 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 C9orf40Q8IXQ3 194 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 TMEM132CQ8N3T6 1108 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 SLC5A8Q8N695 610 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 OR56A1Q8NGH5 318 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 OR2T11Q8NH01 316 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 OR14A16Q8NHC5 309 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 CLHC1Q8NHS4 586 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 SLC2A12Q8TD20 617 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 ZNF721Q8TF20 911 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 C16orf78Q8WTQ4 265 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 TMEM171Q8WVE6 324 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 TWIST2Q8WVJ9 160 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 TANKQ92844 425 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 RIT1Q92963 219 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 MIB2Q96AX9 1013 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 EXOSC8Q96B26 276 aaKnown RBP4.5□□□□□ -1.69
VPS41-205ENST00000414632 KLHL29Q96CT2 875 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 SNRNP40Q96DI7 357 aaKnown RBP4.5□□□□□ -1.69
VPS41-205ENST00000414632 VMP1Q96GC9 406 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 RBM18Q96H35 190 aaKnown RBP4.5□□□□□ -1.69
VPS41-205ENST00000414632 ZNF354BQ96LW1 612 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 HIST1H2AAQ96QV6 131 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 TAAR6Q96RI8 345 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 GAL3ST4Q96RP7 486 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 UTP23Q9BRU9 249 aaKnown RBP4.5□□□□□ -1.69
VPS41-205ENST00000414632 C1orf50Q9BV19 199 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 KRTAP4-7Q9BYR0 210 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 TUBB1Q9H4B7 451 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 ANKRA2Q9H9E1 313 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 WDR41Q9HAD4 459 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 PFDN4Q9NQP4 134 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 NMRK1Q9NWW6 199 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 TMEM160Q9NX00 188 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 MS4A12Q9NXJ0 267 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 PSD3Q9NYI0 1048 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 SENP1Q9P0U3 644 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 COPS7AQ9UBW8 275 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 TEKT2Q9UIF3 430 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 ZDHHC2Q9UIJ5 367 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 NDRG4Q9ULP0 352 aaKnown RBP4.5□□□□□ -1.69
VPS41-205ENST00000414632 DLGAP4Q9Y2H0 992 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 STK38LQ9Y2H1 464 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 COPG1Q9Y678 874 aaKnown RBP4.5□□□□□ -1.69
VPS41-205ENST00000414632 NINQ8N4C6 2090 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 A0A0G2JMM0 328 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 ATP6AP2A0A1C7CYW4 349 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 A0A1W2PPB8 328 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 A0A1W2PRS3 328 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 TMEM120BA0PK00 339 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 C1orf226A1L170 272 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 GOLGA6L10A6NI86 522 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 TMEM200CA6NKL6 621 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 KIR3DP1A8MWS1 328 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 TCP11X1B4DZS4 312 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 DHHO43323 396 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 PRAMEF2O60811 474 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 ATP6AP2O75787 350 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 NEURL1O76050 574 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 WISP2O76076 250 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 ZFAND5O76080 213 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 OR6B1O95007 311 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 CLPSP04118 112 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 TUBBP07437 444 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 CPMP14384 443 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 COX7A2P14406 83 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 EFNA1P20827 205 aaPredicted RBP4.49□□□□□ -1.69
VPS41-205ENST00000414632 UQCRC1P31930 480 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 SOX3P41225 446 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 ANXA11P50995 505 aaKnown RBP4.49□□□□□ -1.69
VPS41-205ENST00000414632 SSR4P51571 173 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 ARFIP1P53367 373 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 IGLV3-21P80748 117 aaPredicted RBP4.49□□□□□ -1.69
VPS41-205ENST00000414632 MRPS35P82673 323 aaKnown RBP4.49□□□□□ -1.69
VPS41-205ENST00000414632 C2orf80Q0P641 193 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 ASPHQ12797 758 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 FHL3Q13643 280 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 CCNIQ14094 377 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 SERTAD2Q14140 314 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 RPS6KA2Q15349 733 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 NNATQ16517 81 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 EIF2S3LQ2VIR3 472 aaKnown RBP4.49□□□□□ -1.69
VPS41-205ENST00000414632 SPIN4Q56A73 249 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 TNFAIP8L3Q5GJ75 292 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 HHATQ5VTY9 493 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 C1QL3Q5VWW1 255 aa4.49□□□□□ -1.69
VPS41-205ENST00000414632 RGS7BPQ6MZT1 257 aaPredicted RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms