RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 ZBTB8AQ96BR9 441 aa10.84□□□□□ -0.67
LIMS2-210ENST00000413578 AMDHD1Q96NU7 426 aa10.84□□□□□ -0.67
LIMS2-210ENST00000413578 KCNA7Q96RP8 456 aa10.84□□□□□ -0.67
LIMS2-210ENST00000413578 PRRG4Q9BZD6 226 aa10.84□□□□□ -0.67
LIMS2-210ENST00000413578 TBL1XR1Q9BZK7 514 aa10.84□□□□□ -0.67
LIMS2-210ENST00000413578 SLCO5A1Q9H2Y9 848 aa10.84□□□□□ -0.67
LIMS2-210ENST00000413578 MYNNQ9NPC7 610 aa10.84□□□□□ -0.67
LIMS2-210ENST00000413578 FANCFQ9NPI8 374 aa10.84□□□□□ -0.67
LIMS2-210ENST00000413578 DDX18Q9NVP1 670 aaKnown RBP10.84□□□□□ -0.67
LIMS2-210ENST00000413578 MRTO4Q9UKD2 239 aaKnown RBP10.84□□□□□ -0.67
LIMS2-210ENST00000413578 NFU1Q9UMS0 254 aa10.84□□□□□ -0.67
LIMS2-210ENST00000413578 RNF115Q9Y4L5 304 aa10.84□□□□□ -0.67
LIMS2-210ENST00000413578 MAGED1Q9Y5V3 778 aaPredicted RBP10.84□□□□□ -0.67
LIMS2-210ENST00000413578 A0A1W2PRB8 838 aa10.83□□□□□ -0.68
LIMS2-210ENST00000413578 NKX2-2O95096 273 aa10.83□□□□□ -0.68
LIMS2-210ENST00000413578 IGHV4-39P01824 125 aa10.83□□□□□ -0.68
LIMS2-210ENST00000413578 ENO1P06733 434 aaKnown RBP10.83□□□□□ -0.68
LIMS2-210ENST00000413578 TUBBP07437 444 aa10.83□□□□□ -0.68
LIMS2-210ENST00000413578 IMPDH1P20839 514 aa10.83□□□□□ -0.68
LIMS2-210ENST00000413578 HMOX2P30519 316 aa10.83□□□□□ -0.68
LIMS2-210ENST00000413578 GABRA3P34903 492 aa10.83□□□□□ -0.68
LIMS2-210ENST00000413578 ACVR1BP36896 505 aa10.83□□□□□ -0.68
LIMS2-210ENST00000413578 CDKN1AP38936 164 aa10.83□□□□□ -0.68
LIMS2-210ENST00000413578 PRKAA2P54646 552 aa10.83□□□□□ -0.68
LIMS2-210ENST00000413578 C2orf80Q0P641 193 aa10.83□□□□□ -0.68
LIMS2-210ENST00000413578 LCP2Q13094 533 aa10.83□□□□□ -0.68
LIMS2-210ENST00000413578 ZNHIT3Q15649 155 aaPredicted RBP10.83□□□□□ -0.68
LIMS2-210ENST00000413578 TAB1Q15750 504 aa10.83□□□□□ -0.68
LIMS2-210ENST00000413578 PGGHGQ32M88 737 aa10.83□□□□□ -0.68
LIMS2-210ENST00000413578 PLPPR5Q32ZL2 321 aa10.83□□□□□ -0.68
LIMS2-210ENST00000413578 ZNF672Q499Z4 452 aaPredicted RBP10.83□□□□□ -0.68
LIMS2-210ENST00000413578 CPTPQ5TA50 214 aa10.83□□□□□ -0.68
LIMS2-210ENST00000413578 PODNL1Q6PEZ8 512 aa10.83□□□□□ -0.68
LIMS2-210ENST00000413578 FIGNL1Q6PIW4 674 aa10.83□□□□□ -0.68
LIMS2-210ENST00000413578 TFAP2EQ6VUC0 442 aa10.83□□□□□ -0.68
LIMS2-210ENST00000413578 ESPNLQ6ZVH7 1005 aa10.83□□□□□ -0.68
LIMS2-210ENST00000413578 ATG4DQ86TL0 474 aaPredicted RBP10.83□□□□□ -0.68
LIMS2-210ENST00000413578 STK32CQ86UX6 486 aa10.83□□□□□ -0.68
LIMS2-210ENST00000413578 STEAP2Q8NFT2 490 aa10.83□□□□□ -0.68
LIMS2-210ENST00000413578 OR4C3Q8NH37 302 aa10.83□□□□□ -0.68
LIMS2-210ENST00000413578 FAM110BQ8TC76 370 aa10.83□□□□□ -0.68
LIMS2-210ENST00000413578 ACTRT2Q8TDY3 377 aa10.83□□□□□ -0.68
LIMS2-210ENST00000413578 RNF128Q8TEB7 428 aa10.83□□□□□ -0.68
LIMS2-210ENST00000413578 SMAP2Q8WU79 429 aaPredicted RBP10.83□□□□□ -0.68
LIMS2-210ENST00000413578 PIK3R3Q92569 461 aa10.83□□□□□ -0.68
LIMS2-210ENST00000413578 NEUROG1Q92886 237 aa10.83□□□□□ -0.68
LIMS2-210ENST00000413578 FBXW5Q969U6 566 aa10.83□□□□□ -0.68
LIMS2-210ENST00000413578 TRMT61AQ96FX7 289 aaKnown RBP10.83□□□□□ -0.68
LIMS2-210ENST00000413578 RNF145Q96MT1 663 aa10.83□□□□□ -0.68
LIMS2-210ENST00000413578 GRIP2Q9C0E4 1043 aa10.83□□□□□ -0.68
LIMS2-210ENST00000413578 MED17Q9NVC6 651 aa10.83□□□□□ -0.68
LIMS2-210ENST00000413578 TMEM216Q9P0N5 145 aa10.83□□□□□ -0.68
LIMS2-210ENST00000413578 STOML1Q9UBI4 398 aa10.83□□□□□ -0.68
LIMS2-210ENST00000413578 WBP11Q9Y2W2 641 aaKnown RBP10.83□□□□□ -0.68
LIMS2-210ENST00000413578 TIMM22Q9Y584 194 aa10.83□□□□□ -0.68
LIMS2-210ENST00000413578 PCNX3Q9H6A9 2034 aa10.82□□□□□ -0.68
LIMS2-210ENST00000413578 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.82□□□□□ -0.68
LIMS2-210ENST00000413578 UBFD1O14562 309 aaKnown RBP10.82□□□□□ -0.68
LIMS2-210ENST00000413578 TNFSF11O14788 317 aa10.82□□□□□ -0.68
LIMS2-210ENST00000413578 GMFGO60234 142 aa10.82□□□□□ -0.68
LIMS2-210ENST00000413578 NDUFS7O75251 213 aa10.82□□□□□ -0.68
LIMS2-210ENST00000413578 KCNH1O95259 989 aa10.82□□□□□ -0.68
LIMS2-210ENST00000413578 SYNGR4O95473 234 aa10.82□□□□□ -0.68
LIMS2-210ENST00000413578 OXSR1O95747 527 aaPredicted RBP10.82□□□□□ -0.68
LIMS2-210ENST00000413578 CD8AP01732 235 aa10.82□□□□□ -0.68
LIMS2-210ENST00000413578 OPN1LWP04000 364 aa10.82□□□□□ -0.68
LIMS2-210ENST00000413578 TAC1P20366 129 aa10.82□□□□□ -0.68
LIMS2-210ENST00000413578 ADH6P28332 368 aa10.82□□□□□ -0.68
LIMS2-210ENST00000413578 SHC1P29353 583 aa10.82□□□□□ -0.68
LIMS2-210ENST00000413578 RFX3P48380 749 aa10.82□□□□□ -0.68
LIMS2-210ENST00000413578 FOXA1P55317 472 aa10.82□□□□□ -0.68
LIMS2-210ENST00000413578 PKNOX1P55347 436 aa10.82□□□□□ -0.68
LIMS2-210ENST00000413578 SLC29A2Q14542 456 aa10.82□□□□□ -0.68
LIMS2-210ENST00000413578 TSC22D1Q15714 1073 aa10.82□□□□□ -0.68
LIMS2-210ENST00000413578 ZNF239Q16600 458 aaKnown RBP10.82□□□□□ -0.68
LIMS2-210ENST00000413578 EXOSC6Q5RKV6 272 aaKnown RBP10.82□□□□□ -0.68
LIMS2-210ENST00000413578 PPP4R4Q6NUP7 873 aa10.82□□□□□ -0.68
LIMS2-210ENST00000413578 TIFABQ6ZNK6 161 aa10.82□□□□□ -0.68
LIMS2-210ENST00000413578 NUFIP2Q7Z417 695 aaKnown RBP10.82□□□□□ -0.68
LIMS2-210ENST00000413578 ZAR1Q86SH2 424 aa10.82□□□□□ -0.68
LIMS2-210ENST00000413578 DTX2Q86UW9 622 aa10.82□□□□□ -0.68
LIMS2-210ENST00000413578 FAM76AQ8TAV0 307 aa10.82□□□□□ -0.68
LIMS2-210ENST00000413578 SLC9A6Q92581 669 aa10.82□□□□□ -0.68
LIMS2-210ENST00000413578 L3HYPDHQ96EM0 354 aa10.82□□□□□ -0.68
LIMS2-210ENST00000413578 GIMAP5Q96F15 307 aa10.82□□□□□ -0.68
LIMS2-210ENST00000413578 ZNF764Q96H86 408 aaPredicted RBP10.82□□□□□ -0.68
LIMS2-210ENST00000413578 TACO1Q9BSH4 297 aaKnown RBP10.82□□□□□ -0.68
LIMS2-210ENST00000413578 HDHD5Q9BXW7 423 aa10.82□□□□□ -0.68
LIMS2-210ENST00000413578 TRIM2Q9C040 744 aa10.82□□□□□ -0.68
LIMS2-210ENST00000413578 GSTO2Q9H4Y5 243 aa10.82□□□□□ -0.68
LIMS2-210ENST00000413578 C12orf49Q9H741 205 aa10.82□□□□□ -0.68
LIMS2-210ENST00000413578 C3orf14Q9HBI5 128 aa10.82□□□□□ -0.68
LIMS2-210ENST00000413578 LRTM1Q9HBL6 345 aa10.82□□□□□ -0.68
LIMS2-210ENST00000413578 HHATLQ9HCP6 504 aa10.82□□□□□ -0.68
LIMS2-210ENST00000413578 MIEF1Q9NQG6 463 aa10.82□□□□□ -0.68
LIMS2-210ENST00000413578 NTMQ9P121 344 aa10.82□□□□□ -0.68
LIMS2-210ENST00000413578 LIPT1Q9Y234 373 aa10.82□□□□□ -0.68
LIMS2-210ENST00000413578 STK38LQ9Y2H1 464 aa10.82□□□□□ -0.68
LIMS2-210ENST00000413578 CADP27708 2225 aa10.81□□□□□ -0.68
LIMS2-210ENST00000413578 UQCRHLA0A096LP55 91 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms