RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 A0A0G2JMM0 328 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 A0A1W2PPB8 328 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 A0A1W2PRS3 328 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 TMEM247A6NEH6 219 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 KIR3DP1A8MWS1 328 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 G3V3Y1 287 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 SDHDO14521 159 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 UBDO15205 165 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 HCRTR2O43614 444 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 DNAJA2O60884 412 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 WISP2O76076 250 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 TOXO94900 526 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 C6orf47O95873 294 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 PGRP06401 933 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 PPIBP23284 216 aaKnown RBP5.8□□□□□ -1.48
USP54-202ENST00000413442 ME2P23368 584 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 ELK4P28324 431 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 ST13P50502 369 aaKnown RBP5.8□□□□□ -1.48
USP54-202ENST00000413442 ZNF41P51814 821 aaPredicted RBP5.8□□□□□ -1.48
USP54-202ENST00000413442 NUP107P57740 925 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 STX1BP61266 288 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 PPP2R2AP63151 447 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 HSF1Q00613 529 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 SORDQ00796 357 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 LASP1Q14847 261 aaKnown RBP5.8□□□□□ -1.48
USP54-202ENST00000413442 ZNF141Q15928 474 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 DUSP5Q16690 384 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 PRSS53Q2L4Q9 553 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 TMEM44Q2T9K0 475 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 SLC25A53Q5H9E4 307 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 WIPI1Q5MNZ9 446 aaPredicted RBP5.8□□□□□ -1.48
USP54-202ENST00000413442 PRAMEF8Q5VWM4 474 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 PRAMEF7Q5VXH5 474 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 RTL6Q6ICC9 239 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 HEPHL1Q6MZM0 1159 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 EPGNQ6UW88 154 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 ESPNLQ6ZVH7 1005 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 SSX8Q7RTT4 187 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 GDF7Q7Z4P5 450 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 DMRTC2Q8IXT2 367 aaPredicted RBP5.8□□□□□ -1.48
USP54-202ENST00000413442 MIER2Q8N344 545 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 GTPBP8Q8N3Z3 284 aaPredicted RBP5.8□□□□□ -1.48
USP54-202ENST00000413442 SIMC1Q8NDZ2 872 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 OR4N2Q8NGD1 307 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 OR4C3Q8NH37 302 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 B4GALNT2Q8NHY0 566 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 DOK4Q8TEW6 326 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 TMEM234Q8WY98 164 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 EFHD2Q96C19 240 aaPredicted RBP5.8□□□□□ -1.48
USP54-202ENST00000413442 NEURL3Q96EH8 262 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 C1GALT1C1Q96EU7 318 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 ITCHQ96J02 903 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 MRGPRX4Q96LA9 322 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 MAGEB18Q96M61 343 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 SFXN2Q96NB2 322 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 OR52E6Q96RD3 313 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 PANX1Q96RD7 426 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 TACO1Q9BSH4 297 aaKnown RBP5.8□□□□□ -1.48
USP54-202ENST00000413442 C1orf50Q9BV19 199 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 SFXN3Q9BWM7 321 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 SLC6A15Q9H2J7 730 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 DSN1Q9H410 356 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 MTHFD2LQ9H903 347 aaPredicted RBP5.8□□□□□ -1.48
USP54-202ENST00000413442 SERHLQ9NQF3 203 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 INTS9Q9NV88 658 aaKnown RBP5.8□□□□□ -1.48
USP54-202ENST00000413442 PNPOQ9NVS9 261 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 GPATCH2Q9NW75 528 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 ALKBH4Q9NXW9 302 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 SPRR3Q9UBC9 169 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 SH3BGRL2Q9UJC5 107 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 TRIM33Q9UPN9 1127 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 SLC35A3Q9Y2D2 325 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 FAM215AQ9Y5M1 114 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 PTGDR2Q9Y5Y4 395 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 DOPEY1Q5JWR5 2465 aa5.8□□□□□ -1.48
USP54-202ENST00000413442 A0A0G2JNJ9 132 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 FAM234BA2RU67 622 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 NPIPB9F8W1W9 429 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 H0Y3Z8 333 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 GTPBP1O00178 669 aaKnown RBP5.79□□□□□ -1.48
USP54-202ENST00000413442 ETV2O00321 342 aaPredicted RBP5.79□□□□□ -1.48
USP54-202ENST00000413442 RFXANKO14593 260 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 MSTNO14793 375 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 ADAMDEC1O15204 470 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 POLR3GO15318 223 aaPredicted RBP5.79□□□□□ -1.48
USP54-202ENST00000413442 ZNF264O43296 627 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 OXSR1O95747 527 aaPredicted RBP5.79□□□□□ -1.48
USP54-202ENST00000413442 NPPAP01160 153 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 CELA3AP09093 270 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 ACP2P11117 423 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 UQCRBP14927 111 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 IGFBP2P18065 325 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 HK1P19367 917 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 PGCP20142 388 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 ADSLP30566 484 aaPredicted RBP5.79□□□□□ -1.48
USP54-202ENST00000413442 HTR3AP46098 478 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 SLC6A8P48029 635 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 LHX2P50458 406 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 ASCL1P50553 236 aa5.79□□□□□ -1.48
USP54-202ENST00000413442 ATP4BP51164 291 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms