RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 ARL8AQ96BM9 186 aa17.22■□□□□ 0.35
SF3A1-202ENST00000411423 UCN2Q96RP3 112 aa17.22■□□□□ 0.35
SF3A1-202ENST00000411423 STACQ99469 402 aa17.22■□□□□ 0.35
SF3A1-202ENST00000411423 BTBD2Q9BX70 525 aa17.22■□□□□ 0.35
SF3A1-202ENST00000411423 ACTRT3Q9BYD9 372 aa17.22■□□□□ 0.35
SF3A1-202ENST00000411423 WDR55Q9H6Y2 383 aaPredicted RBP17.22■□□□□ 0.35
SF3A1-202ENST00000411423 SDHAF3Q9NRP4 125 aa17.22■□□□□ 0.35
SF3A1-202ENST00000411423 DUSP22Q9NRW4 184 aa17.22■□□□□ 0.35
SF3A1-202ENST00000411423 MARCOQ9UEW3 520 aaPredicted RBP17.22■□□□□ 0.35
SF3A1-202ENST00000411423 C9JVG2 144 aa17.21■□□□□ 0.35
SF3A1-202ENST00000411423 CFLARO15519 480 aa17.21■□□□□ 0.35
SF3A1-202ENST00000411423 OIP5O43482 229 aa17.21■□□□□ 0.35
SF3A1-202ENST00000411423 ERLIN1O75477 346 aa17.21■□□□□ 0.35
SF3A1-202ENST00000411423 SNUPNO95149 360 aaKnown RBP17.21■□□□□ 0.35
SF3A1-202ENST00000411423 DDX5P17844 614 aaKnown RBP17.21■□□□□ 0.35
SF3A1-202ENST00000411423 LBPP18428 481 aa17.21■□□□□ 0.35
SF3A1-202ENST00000411423 IL12AP29459 219 aa17.21■□□□□ 0.35
SF3A1-202ENST00000411423 SSTR2P30874 369 aa17.21■□□□□ 0.35
SF3A1-202ENST00000411423 GCKP35557 465 aa17.21■□□□□ 0.35
SF3A1-202ENST00000411423 CLDN20P56880 219 aa17.21■□□□□ 0.35
SF3A1-202ENST00000411423 C17orf67Q0P5P2 114 aa17.21■□□□□ 0.35
SF3A1-202ENST00000411423 RCAN2Q14206 197 aa17.21■□□□□ 0.35
SF3A1-202ENST00000411423 LSM12Q3MHD2 195 aaKnown RBP17.21■□□□□ 0.35
SF3A1-202ENST00000411423 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.21■□□□□ 0.35
SF3A1-202ENST00000411423 MAVSQ7Z434 540 aa17.21■□□□□ 0.35
SF3A1-202ENST00000411423 ANKRD46Q86W74 232 aa17.21■□□□□ 0.35
SF3A1-202ENST00000411423 UBQLNLQ8IYU4 475 aa17.21■□□□□ 0.35
SF3A1-202ENST00000411423 NATD1Q8N6N6 113 aa17.21■□□□□ 0.35
SF3A1-202ENST00000411423 OR56A1Q8NGH5 318 aa17.21■□□□□ 0.35
SF3A1-202ENST00000411423 SFXN5Q8TD22 340 aa17.21■□□□□ 0.35
SF3A1-202ENST00000411423 OR7D2Q96RA2 312 aa17.21■□□□□ 0.35
SF3A1-202ENST00000411423 PRPF18Q99633 342 aaKnown RBP17.21■□□□□ 0.35
SF3A1-202ENST00000411423 ZNF629Q9UEG4 869 aaPredicted RBP17.21■□□□□ 0.35
SF3A1-202ENST00000411423 VDAC3Q9Y277 283 aa17.21■□□□□ 0.35
SF3A1-202ENST00000411423 OTOGQ6ZRI0 2925 aa17.21■□□□□ 0.35
SF3A1-202ENST00000411423 SYT5O00445 386 aa17.2■□□□□ 0.34
SF3A1-202ENST00000411423 DVL2O14641 736 aa17.2■□□□□ 0.34
SF3A1-202ENST00000411423 TMIGD3P0DMS9 266 aaPredicted RBP17.2■□□□□ 0.34
SF3A1-202ENST00000411423 KITP10721 976 aa17.2■□□□□ 0.34
SF3A1-202ENST00000411423 CTSSP25774 331 aa17.2■□□□□ 0.34
SF3A1-202ENST00000411423 SOAT1P35610 550 aa17.2■□□□□ 0.34
SF3A1-202ENST00000411423 CLK3P49761 638 aaKnown RBP17.2■□□□□ 0.34
SF3A1-202ENST00000411423 SLC18A1P54219 525 aa17.2■□□□□ 0.34
SF3A1-202ENST00000411423 CASP9P55211 416 aa17.2■□□□□ 0.34
SF3A1-202ENST00000411423 NME5P56597 212 aa17.2■□□□□ 0.34
SF3A1-202ENST00000411423 OCRLQ01968 901 aa17.2■□□□□ 0.34
SF3A1-202ENST00000411423 GANABQ14697 944 aaKnown RBP17.2■□□□□ 0.34
SF3A1-202ENST00000411423 CASP8Q14790 479 aa17.2■□□□□ 0.34
SF3A1-202ENST00000411423 BCL2A1Q16548 175 aa17.2■□□□□ 0.34
SF3A1-202ENST00000411423 SPDYE7PQ495Y7 208 aa17.2■□□□□ 0.34
SF3A1-202ENST00000411423 SPANXN4Q5MJ08 99 aa17.2■□□□□ 0.34
SF3A1-202ENST00000411423 DCST2Q5T1A1 773 aa17.2■□□□□ 0.34
SF3A1-202ENST00000411423 WDR75Q8IWA0 830 aaKnown RBP17.2■□□□□ 0.34
SF3A1-202ENST00000411423 GCNT2Q8N0V5 402 aa17.2■□□□□ 0.34
SF3A1-202ENST00000411423 OR8J2Q8NGG1 315 aa17.2■□□□□ 0.34
SF3A1-202ENST00000411423 ZNF524Q96C55 264 aa17.2■□□□□ 0.34
SF3A1-202ENST00000411423 CHMP6Q96FZ7 201 aa17.2■□□□□ 0.34
SF3A1-202ENST00000411423 DPY30Q9C005 99 aa17.2■□□□□ 0.34
SF3A1-202ENST00000411423 MCCC2Q9HCC0 563 aa17.2■□□□□ 0.34
SF3A1-202ENST00000411423 NEUROD4Q9HD90 331 aa17.2■□□□□ 0.34
SF3A1-202ENST00000411423 JKAMPQ9P055 326 aa17.2■□□□□ 0.34
SF3A1-202ENST00000411423 GOLGA8QA0A0J9YX86 632 aa17.19■□□□□ 0.34
SF3A1-202ENST00000411423 GOLGA8OA6NCC3 632 aa17.19■□□□□ 0.34
SF3A1-202ENST00000411423 GOLGA8NF8WBI6 632 aa17.19■□□□□ 0.34
SF3A1-202ENST00000411423 H3BML4 177 aa17.19■□□□□ 0.34
SF3A1-202ENST00000411423 RNASET2O00584 256 aaKnown RBP17.19■□□□□ 0.34
SF3A1-202ENST00000411423 NDUFB5O43674 189 aa17.19■□□□□ 0.34
SF3A1-202ENST00000411423 RCBTB2O95199 551 aa17.19■□□□□ 0.34
SF3A1-202ENST00000411423 POU3F2P20265 443 aaPredicted RBP17.19■□□□□ 0.34
SF3A1-202ENST00000411423 EPHA3P29320 983 aa17.19■□□□□ 0.34
SF3A1-202ENST00000411423 ASCL1P50553 236 aa17.19■□□□□ 0.34
SF3A1-202ENST00000411423 DGKQP52824 942 aa17.19■□□□□ 0.34
SF3A1-202ENST00000411423 UFM1P61960 85 aa17.19■□□□□ 0.34
SF3A1-202ENST00000411423 SF3B4Q15427 424 aaKnown RBP eCLIP17.19■□□□□ 0.341e-6■■■□□ 16.5
SF3A1-202ENST00000411423 FBXL19-AS1Q494R0 122 aa17.19■□□□□ 0.34
SF3A1-202ENST00000411423 OGFOD2Q6N063 350 aa17.19■□□□□ 0.34
SF3A1-202ENST00000411423 POC1BQ8TC44 478 aa17.19■□□□□ 0.34
SF3A1-202ENST00000411423 ADAMTS15Q8TE58 950 aa17.19■□□□□ 0.34
SF3A1-202ENST00000411423 FIG4Q92562 907 aa17.19■□□□□ 0.34
SF3A1-202ENST00000411423 WNT2BQ93097 391 aa17.19■□□□□ 0.34
SF3A1-202ENST00000411423 INTS12Q96CB8 462 aaKnown RBP17.19■□□□□ 0.34
SF3A1-202ENST00000411423 SH3YL1Q96HL8 342 aaPredicted RBP17.19■□□□□ 0.34
SF3A1-202ENST00000411423 ZNF845Q96IR2 970 aaPredicted RBP17.19■□□□□ 0.34
SF3A1-202ENST00000411423 PTGES2Q9H7Z7 377 aa17.19■□□□□ 0.34
SF3A1-202ENST00000411423 UBQLN4Q9NRR5 601 aa17.19■□□□□ 0.34
SF3A1-202ENST00000411423 AIG1Q9NVV5 245 aa17.19■□□□□ 0.34
SF3A1-202ENST00000411423 THAP1Q9NVV9 213 aa17.19■□□□□ 0.34
SF3A1-202ENST00000411423 CENPVL1A0A0U1RR11 272 aa17.18■□□□□ 0.34
SF3A1-202ENST00000411423 A0A1W2PQD3 144 aa17.18■□□□□ 0.34
SF3A1-202ENST00000411423 NPIPB9F8W1W9 429 aa17.18■□□□□ 0.34
SF3A1-202ENST00000411423 SEC14L5O43304 696 aa17.18■□□□□ 0.34
SF3A1-202ENST00000411423 PEPDP12955 493 aa17.18■□□□□ 0.34
SF3A1-202ENST00000411423 PSMA4P25789 261 aaKnown RBP17.18■□□□□ 0.34
SF3A1-202ENST00000411423 UQCRC1P31930 480 aa17.18■□□□□ 0.34
SF3A1-202ENST00000411423 NDUFAF6Q330K2 333 aa17.18■□□□□ 0.34
SF3A1-202ENST00000411423 C6orf120Q7Z4R8 191 aa17.18■□□□□ 0.34
SF3A1-202ENST00000411423 GGNQ86UU5 652 aa17.18■□□□□ 0.34
SF3A1-202ENST00000411423 LRRC34Q8IZ02 419 aa17.18■□□□□ 0.34
SF3A1-202ENST00000411423 OR4A15Q8NGL6 344 aa17.18■□□□□ 0.34
SF3A1-202ENST00000411423 TESCQ96BS2 214 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms