RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 TMEM27Q9HBJ8 222 aa12.62□□□□□ -0.39
LIMS1-205ENST00000410093 FAM60AQ9NP50 221 aa12.62□□□□□ -0.39
LIMS1-205ENST00000410093 PDE7BQ9NP56 450 aa12.62□□□□□ -0.39
LIMS1-205ENST00000410093 SELENONQ9NZV5 590 aa12.62□□□□□ -0.39
LIMS1-205ENST00000410093 CDH10Q9Y6N8 788 aa12.62□□□□□ -0.39
LIMS1-205ENST00000410093 VPS13AQ96RL7 3174 aa12.61□□□□□ -0.39
LIMS1-205ENST00000410093 TMEM129A0AVI4 362 aa12.61□□□□□ -0.39
LIMS1-205ENST00000410093 ZNF860A6NHJ4 632 aa12.61□□□□□ -0.39
LIMS1-205ENST00000410093 SAGE2PA6NJ88 616 aa12.61□□□□□ -0.39
LIMS1-205ENST00000410093 SLC9B1P1A6NJY1 282 aa12.61□□□□□ -0.39
LIMS1-205ENST00000410093 SGK494L7N484 410 aa12.61□□□□□ -0.39
LIMS1-205ENST00000410093 MYL12BO14950 172 aa12.61□□□□□ -0.39
LIMS1-205ENST00000410093 AQP9O43315 295 aa12.61□□□□□ -0.39
LIMS1-205ENST00000410093 TPST2O60704 377 aa12.61□□□□□ -0.39
LIMS1-205ENST00000410093 RDH16O75452 317 aa12.61□□□□□ -0.39
LIMS1-205ENST00000410093 RCBTB2O95199 551 aa12.61□□□□□ -0.39
LIMS1-205ENST00000410093 DRD5P21918 477 aa12.61□□□□□ -0.39
LIMS1-205ENST00000410093 GADD45AP24522 165 aa12.61□□□□□ -0.39
LIMS1-205ENST00000410093 PSMA1P25786 263 aaKnown RBP12.61□□□□□ -0.39
LIMS1-205ENST00000410093 CD40LGP29965 261 aa12.61□□□□□ -0.39
LIMS1-205ENST00000410093 GABRA3P34903 492 aa12.61□□□□□ -0.39
LIMS1-205ENST00000410093 TRHRP34981 398 aaPredicted RBP12.61□□□□□ -0.39
LIMS1-205ENST00000410093 PTGER1P34995 402 aa12.61□□□□□ -0.39
LIMS1-205ENST00000410093 SOX18P35713 384 aa12.61□□□□□ -0.39
LIMS1-205ENST00000410093 FNTBP49356 437 aa12.61□□□□□ -0.39
LIMS1-205ENST00000410093 ZNF136P52737 540 aa12.61□□□□□ -0.39
LIMS1-205ENST00000410093 NCS1P62166 190 aa12.61□□□□□ -0.39
LIMS1-205ENST00000410093 GRM7Q14831 915 aa12.61□□□□□ -0.39
LIMS1-205ENST00000410093 GPR68Q15743 365 aa12.61□□□□□ -0.39
LIMS1-205ENST00000410093 Q6ZNX1 250 aa12.61□□□□□ -0.39
LIMS1-205ENST00000410093 PRSS41Q7RTY9 318 aa12.61□□□□□ -0.39
LIMS1-205ENST00000410093 DGLUCYQ7Z3D6 616 aa12.61□□□□□ -0.39
LIMS1-205ENST00000410093 NLGN4XQ8N0W4 816 aa12.61□□□□□ -0.39
LIMS1-205ENST00000410093 MCFD2Q8NI22 146 aa12.61□□□□□ -0.39
LIMS1-205ENST00000410093 LMX1AQ8TE12 382 aa12.61□□□□□ -0.39
LIMS1-205ENST00000410093 RIT1Q92963 219 aa12.61□□□□□ -0.39
LIMS1-205ENST00000410093 ZNF582Q96NG8 517 aaPredicted RBP12.61□□□□□ -0.39
LIMS1-205ENST00000410093 CCNL2Q96S94 520 aaPredicted RBP12.61□□□□□ -0.39
LIMS1-205ENST00000410093 TRIM2Q9C040 744 aa12.61□□□□□ -0.39
LIMS1-205ENST00000410093 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.61□□□□□ -0.39
LIMS1-205ENST00000410093 BAIAP2Q9UQB8 552 aa12.61□□□□□ -0.39
LIMS1-205ENST00000410093 GPR55Q9Y2T6 319 aaPredicted RBP12.61□□□□□ -0.39
LIMS1-205ENST00000410093 LSM2Q9Y333 95 aaKnown RBP12.61□□□□□ -0.39
LIMS1-205ENST00000410093 TDRD6O60522 2096 aaKnown RBP12.61□□□□□ -0.39
LIMS1-205ENST00000410093 CEP192Q8TEP8 1941 aa12.6□□□□□ -0.39
LIMS1-205ENST00000410093 KPNA4O00629 521 aaPredicted RBP12.6□□□□□ -0.39
LIMS1-205ENST00000410093 PRKYO43930 277 aa12.6□□□□□ -0.39
LIMS1-205ENST00000410093 OPRL1P41146 370 aa12.6□□□□□ -0.39
LIMS1-205ENST00000410093 MLLT3P42568 568 aaPredicted RBP12.6□□□□□ -0.39
LIMS1-205ENST00000410093 NXPH1P58417 271 aa12.6□□□□□ -0.39
LIMS1-205ENST00000410093 PRKCDQ05655 676 aa12.6□□□□□ -0.39
LIMS1-205ENST00000410093 ZNF155Q12901 538 aaPredicted RBP12.6□□□□□ -0.39
LIMS1-205ENST00000410093 SLC13A2Q13183 592 aa12.6□□□□□ -0.39
LIMS1-205ENST00000410093 RGS21Q2M5E4 152 aa12.6□□□□□ -0.39
LIMS1-205ENST00000410093 C14orf28Q4W4Y0 310 aa12.6□□□□□ -0.39
LIMS1-205ENST00000410093 MRPL2Q5T653 305 aaKnown RBP12.6□□□□□ -0.39
LIMS1-205ENST00000410093 ACSM5Q6NUN0 579 aa12.6□□□□□ -0.39
LIMS1-205ENST00000410093 ZNF620Q6ZNG0 422 aa12.6□□□□□ -0.39
LIMS1-205ENST00000410093 TMPRSS11FQ6ZWK6 438 aa12.6□□□□□ -0.39
LIMS1-205ENST00000410093 ZNF550Q7Z398 422 aa12.6□□□□□ -0.39
LIMS1-205ENST00000410093 KIF18BQ86Y91 864 aa12.6□□□□□ -0.39
LIMS1-205ENST00000410093 GID4Q8IVV7 300 aa12.6□□□□□ -0.39
LIMS1-205ENST00000410093 SLC34A3Q8N130 599 aa12.6□□□□□ -0.39
LIMS1-205ENST00000410093 TMCO5AQ8N6Q1 288 aa12.6□□□□□ -0.39
LIMS1-205ENST00000410093 SUMF1Q8NBK3 374 aa12.6□□□□□ -0.39
LIMS1-205ENST00000410093 GALNT6Q8NCL4 622 aa12.6□□□□□ -0.39
LIMS1-205ENST00000410093 TMEM52Q8NDY8 209 aa12.6□□□□□ -0.39
LIMS1-205ENST00000410093 OR2T33Q8NG76 320 aa12.6□□□□□ -0.39
LIMS1-205ENST00000410093 OR7G1Q8NGA0 311 aa12.6□□□□□ -0.39
LIMS1-205ENST00000410093 OR5T3Q8NGG3 340 aa12.6□□□□□ -0.39
LIMS1-205ENST00000410093 OR9A4Q8NGU2 314 aa12.6□□□□□ -0.39
LIMS1-205ENST00000410093 CHPT1Q8WUD6 406 aa12.6□□□□□ -0.39
LIMS1-205ENST00000410093 DGAT2Q96PD7 388 aa12.6□□□□□ -0.39
LIMS1-205ENST00000410093 JAM3Q9BX67 310 aa12.6□□□□□ -0.39
LIMS1-205ENST00000410093 ANKRA2Q9H9E1 313 aa12.6□□□□□ -0.39
LIMS1-205ENST00000410093 PRTFDC1Q9NRG1 225 aa12.6□□□□□ -0.39
LIMS1-205ENST00000410093 DNAJC27Q9NZQ0 273 aa12.6□□□□□ -0.39
LIMS1-205ENST00000410093 PRODH2Q9UF12 536 aa12.6□□□□□ -0.39
LIMS1-205ENST00000410093 PEX16Q9Y5Y5 336 aa12.6□□□□□ -0.39
LIMS1-205ENST00000410093 CSNK1G3Q9Y6M4 447 aa12.6□□□□□ -0.39
LIMS1-205ENST00000410093 DMDP11532 3685 aa12.6□□□□□ -0.39
LIMS1-205ENST00000410093 PNMA8CA0A1B0GUJ8 204 aa12.59□□□□□ -0.39
LIMS1-205ENST00000410093 A0A1B0GVG6 124 aa12.59□□□□□ -0.39
LIMS1-205ENST00000410093 K7ESF4 209 aa12.59□□□□□ -0.39
LIMS1-205ENST00000410093 DNAJB6O75190 326 aa12.59□□□□□ -0.39
LIMS1-205ENST00000410093 KCNK2O95069 426 aa12.59□□□□□ -0.39
LIMS1-205ENST00000410093 CBX7O95931 251 aa12.59□□□□□ -0.39
LIMS1-205ENST00000410093 WNT1P04628 370 aa12.59□□□□□ -0.39
LIMS1-205ENST00000410093 HSMCR30P0CW71 290 aa12.59□□□□□ -0.39
LIMS1-205ENST00000410093 NR4A1P22736 598 aa12.59□□□□□ -0.39
LIMS1-205ENST00000410093 HOXA6P31267 233 aa12.59□□□□□ -0.39
LIMS1-205ENST00000410093 S100A5P33763 92 aa12.59□□□□□ -0.39
LIMS1-205ENST00000410093 GRK5P34947 590 aa12.59□□□□□ -0.39
LIMS1-205ENST00000410093 CAPZA2P47755 286 aa12.59□□□□□ -0.39
LIMS1-205ENST00000410093 MTNR1AP48039 350 aa12.59□□□□□ -0.39
LIMS1-205ENST00000410093 MAZP56270 477 aaKnown RBP12.59□□□□□ -0.39
LIMS1-205ENST00000410093 CTBP2P56545 445 aa12.59□□□□□ -0.39
LIMS1-205ENST00000410093 ZNF45Q02386 682 aa12.59□□□□□ -0.39
LIMS1-205ENST00000410093 OR1Q1Q15612 314 aa12.59□□□□□ -0.39
LIMS1-205ENST00000410093 ZNF141Q15928 474 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms