RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 FAM57AQ8TBR7 257 aa20.34■□□□□ 0.85
PTCD3-203ENST00000409783 RELTQ969Z4 430 aa20.34■□□□□ 0.85
PTCD3-203ENST00000409783 ELAC2Q9BQ52 826 aaKnown RBP20.34■□□□□ 0.85
PTCD3-203ENST00000409783 LDAHQ9H6V9 325 aa20.34■□□□□ 0.85
PTCD3-203ENST00000409783 MED11Q9P086 117 aa20.34■□□□□ 0.85
PTCD3-203ENST00000409783 ERRFI1Q9UJM3 462 aaPredicted RBP20.34■□□□□ 0.85
PTCD3-203ENST00000409783 LEF1Q9UJU2 399 aaPredicted RBP20.34■□□□□ 0.85
PTCD3-203ENST00000409783 MKLN1Q9UL63 735 aa20.34■□□□□ 0.85
PTCD3-203ENST00000409783 NDUFAF1Q9Y375 327 aa20.34■□□□□ 0.85
PTCD3-203ENST00000409783 MRPS18CQ9Y3D5 142 aaKnown RBP20.34■□□□□ 0.85
PTCD3-203ENST00000409783 MYO7BQ6PIF6 2116 aa20.33■□□□□ 0.85
PTCD3-203ENST00000409783 OR14I1A6ND48 311 aa20.33■□□□□ 0.85
PTCD3-203ENST00000409783 CLIC1O00299 241 aa20.33■□□□□ 0.85
PTCD3-203ENST00000409783 FBP2O00757 339 aa20.33■□□□□ 0.85
PTCD3-203ENST00000409783 NDUFB5O43674 189 aa20.33■□□□□ 0.85
PTCD3-203ENST00000409783 ZIC3O60481 467 aa20.33■□□□□ 0.85
PTCD3-203ENST00000409783 ETFAP13804 333 aa20.33■□□□□ 0.85
PTCD3-203ENST00000409783 ABOP16442 354 aa20.33■□□□□ 0.85
PTCD3-203ENST00000409783 SRD5A2P31213 254 aa20.33■□□□□ 0.85
PTCD3-203ENST00000409783 ZNF141Q15928 474 aa20.33■□□□□ 0.85
PTCD3-203ENST00000409783 SYPL1Q16563 259 aa20.33■□□□□ 0.85
PTCD3-203ENST00000409783 C4orf17Q53FE4 359 aa20.33■□□□□ 0.85
PTCD3-203ENST00000409783 WIPI1Q5MNZ9 446 aaPredicted RBP20.33■□□□□ 0.85
PTCD3-203ENST00000409783 FRRS1Q6ZNA5 592 aa20.33■□□□□ 0.85
PTCD3-203ENST00000409783 YRDCQ86U90 279 aaKnown RBP20.33■□□□□ 0.85
PTCD3-203ENST00000409783 DOLPP1Q86YN1 238 aa20.33■□□□□ 0.85
PTCD3-203ENST00000409783 GATSQ8NAP1 163 aa20.33■□□□□ 0.85
PTCD3-203ENST00000409783 TRNT1Q96Q11 434 aaKnown RBP20.33■□□□□ 0.85
PTCD3-203ENST00000409783 POLE3Q9NRF9 147 aa20.33■□□□□ 0.85
PTCD3-203ENST00000409783 MRGBPQ9NV56 204 aa20.33■□□□□ 0.85
PTCD3-203ENST00000409783 TNFRSF10DQ9UBN6 386 aa20.33■□□□□ 0.85
PTCD3-203ENST00000409783 TINAGQ9UJW2 476 aa20.33■□□□□ 0.85
PTCD3-203ENST00000409783 LIPT1Q9Y234 373 aa20.33■□□□□ 0.85
PTCD3-203ENST00000409783 NPIPA2E9PIF3 369 aa20.32■□□□□ 0.84
PTCD3-203ENST00000409783 NPIPA3F8WFD2 350 aa20.32■□□□□ 0.84
PTCD3-203ENST00000409783 SCDO00767 359 aa20.32■□□□□ 0.84
PTCD3-203ENST00000409783 KIAA0513O60268 411 aa20.32■□□□□ 0.84
PTCD3-203ENST00000409783 SNX3O60493 162 aa20.32■□□□□ 0.84
PTCD3-203ENST00000409783 UGT2B17O75795 530 aa20.32■□□□□ 0.84
PTCD3-203ENST00000409783 CHRM4P08173 479 aa20.32■□□□□ 0.84
PTCD3-203ENST00000409783 BMP2P12643 396 aa20.32■□□□□ 0.84
PTCD3-203ENST00000409783 ADSLP30566 484 aaPredicted RBP20.32■□□□□ 0.84
PTCD3-203ENST00000409783 ANXA11P50995 505 aaKnown RBP20.32■□□□□ 0.84
PTCD3-203ENST00000409783 RGNQ15493 299 aa20.32■□□□□ 0.84
PTCD3-203ENST00000409783 GPR68Q15743 365 aa20.32■□□□□ 0.84
PTCD3-203ENST00000409783 C10orf111Q8N326 155 aa20.32■□□□□ 0.84
PTCD3-203ENST00000409783 OR4K17Q8NGC6 315 aa20.32■□□□□ 0.84
PTCD3-203ENST00000409783 KLHDC3Q9BQ90 382 aa20.32■□□□□ 0.84
PTCD3-203ENST00000409783 SLC38A1Q9H2H9 487 aa20.32■□□□□ 0.84
PTCD3-203ENST00000409783 IKZF5Q9H5V7 419 aa20.32■□□□□ 0.84
PTCD3-203ENST00000409783 SLC6A5Q9Y345 797 aa20.32■□□□□ 0.84
PTCD3-203ENST00000409783 WDR45Q9Y484 360 aa20.32■□□□□ 0.84
PTCD3-203ENST00000409783 DTNAQ9Y4J8 743 aa20.32■□□□□ 0.84
PTCD3-203ENST00000409783 BAHCC1Q9P281 2608 aa20.31■□□□□ 0.84
PTCD3-203ENST00000409783 TRGV8A0A0C4DH27 118 aa20.31■□□□□ 0.84
PTCD3-203ENST00000409783 LRRTM2O43300 516 aa20.31■□□□□ 0.84
PTCD3-203ENST00000409783 OIP5O43482 229 aa20.31■□□□□ 0.84
PTCD3-203ENST00000409783 H6PDO95479 791 aa20.31■□□□□ 0.84
PTCD3-203ENST00000409783 HPGDP15428 266 aa20.31■□□□□ 0.84
PTCD3-203ENST00000409783 DPP4P27487 766 aa20.31■□□□□ 0.84
PTCD3-203ENST00000409783 CRATP43155 626 aa20.31■□□□□ 0.84
PTCD3-203ENST00000409783 RNF144AP50876 292 aaPredicted RBP20.31■□□□□ 0.84
PTCD3-203ENST00000409783 DSCR4P56555 118 aaPredicted RBP20.31■□□□□ 0.84
PTCD3-203ENST00000409783 CHRNEQ04844 493 aa20.31■□□□□ 0.84
PTCD3-203ENST00000409783 CRYZQ08257 329 aaKnown RBP20.31■□□□□ 0.84
PTCD3-203ENST00000409783 TOMM20Q15388 145 aa20.31■□□□□ 0.84
PTCD3-203ENST00000409783 MAPK14Q16539 360 aa20.31■□□□□ 0.84
PTCD3-203ENST00000409783 NHSL2Q5HYW2 709 aa20.31■□□□□ 0.84
PTCD3-203ENST00000409783 PDZK1Q5T2W1 519 aa20.31■□□□□ 0.84
PTCD3-203ENST00000409783 CD163Q86VB7 1156 aa20.31■□□□□ 0.84
PTCD3-203ENST00000409783 FAM26EQ8N5C1 309 aa20.31■□□□□ 0.84
PTCD3-203ENST00000409783 ZNF527Q8NB42 609 aa20.31■□□□□ 0.84
PTCD3-203ENST00000409783 ZG16BQ96DA0 208 aa20.31■□□□□ 0.84
PTCD3-203ENST00000409783 FAM107BQ9H098 131 aa20.31■□□□□ 0.84
PTCD3-203ENST00000409783 RUBCNLQ9H714 662 aa20.31■□□□□ 0.84
PTCD3-203ENST00000409783 SLC5A6Q9Y289 635 aa20.31■□□□□ 0.84
PTCD3-203ENST00000409783 DIDO1Q9BTC0 2240 aaKnown RBP20.31■□□□□ 0.84
PTCD3-203ENST00000409783 HEATR5AQ86XA9 2040 aa20.31■□□□□ 0.84
PTCD3-203ENST00000409783 ANGPT2O15123 496 aa20.3■□□□□ 0.84
PTCD3-203ENST00000409783 SLC22A2O15244 555 aa20.3■□□□□ 0.84
PTCD3-203ENST00000409783 TNFRSF21O75509 655 aa20.3■□□□□ 0.84
PTCD3-203ENST00000409783 TPOP07202 933 aa20.3■□□□□ 0.84
PTCD3-203ENST00000409783 NUDT7P0C024 238 aa20.3■□□□□ 0.84
PTCD3-203ENST00000409783 TFPTP0C1Z6 253 aa20.3■□□□□ 0.84
PTCD3-203ENST00000409783 B3GALT5-AS1P59052 145 aa20.3■□□□□ 0.84
PTCD3-203ENST00000409783 DSTNP60981 165 aa20.3■□□□□ 0.84
PTCD3-203ENST00000409783 FADDQ13158 208 aa20.3■□□□□ 0.84
PTCD3-203ENST00000409783 GXYLT1Q4G148 440 aa20.3■□□□□ 0.84
PTCD3-203ENST00000409783 GPAT3Q53EU6 434 aa20.3■□□□□ 0.84
PTCD3-203ENST00000409783 RUNDC3AQ59EK9 446 aa20.3■□□□□ 0.84
PTCD3-203ENST00000409783 VASNQ6EMK4 673 aa20.3■□□□□ 0.84
PTCD3-203ENST00000409783 LRRC74BQ6ZQY2 392 aa20.3■□□□□ 0.84
PTCD3-203ENST00000409783 MTERF4Q7Z6M4 381 aaKnown RBP20.3■□□□□ 0.84
PTCD3-203ENST00000409783 MISPQ8IVT2 679 aa20.3■□□□□ 0.84
PTCD3-203ENST00000409783 ZNF619Q8N2I2 560 aa20.3■□□□□ 0.84
PTCD3-203ENST00000409783 SARAFQ96BY9 339 aa20.3■□□□□ 0.84
PTCD3-203ENST00000409783 C1GALT1C1Q96EU7 318 aa20.3■□□□□ 0.84
PTCD3-203ENST00000409783 CPPED1Q9BRF8 314 aaPredicted RBP20.3■□□□□ 0.84
PTCD3-203ENST00000409783 EXO5Q9H790 373 aa20.3■□□□□ 0.84
PTCD3-203ENST00000409783 PNPLA3Q9NST1 481 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms