RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 UROSP10746 265 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 SELEP16581 610 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 CDKN2BP42772 138 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 MARCKSL1P49006 195 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 PGFP49763 221 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 CDH6P55285 790 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 NME5P56597 212 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 HILS1P60008 231 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 SLC7A9P82251 487 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 CKAP4Q07065 602 aaKnown RBP4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 NME3Q13232 169 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 TFDP2Q14188 446 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 PPA1Q15181 289 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 SMU1Q2TAY7 513 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 ODF2Q5BJF6 829 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 TFDP3Q5H9I0 405 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 TCEAL5Q5H9L2 206 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 SPANXN4Q5MJ08 99 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 C10orf120Q5SQS8 335 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 SEL1L2Q5TEA6 688 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 SLC27A4Q6P1M0 643 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 SCYL2Q6P3W7 929 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 MACC1Q6ZN28 852 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 FAM131BQ86XD5 332 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 SNX32Q86XE0 403 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 SLC13A5Q86YT5 568 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 SIAH3Q8IW03 269 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 CEP112Q8N8E3 955 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 ATP6V0D2Q8N8Y2 350 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 AQP11Q8NBQ7 271 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 MNS1Q8NEH6 495 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 VN1R2Q8NFZ6 395 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 OR4D10Q8NGI6 311 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 ZNF707Q96C28 371 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 FAF2Q96CS3 445 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 BTN2A3PQ96KV6 586 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 NSMCE3Q96MG7 304 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 PEBP4Q96S96 227 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 OVOL2Q9BRP0 275 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 SNRNP25Q9BV90 132 aaKnown RBP4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 FRMD8P1Q9BZ68 369 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 OSBPL8Q9BZF1 889 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 MED20Q9H944 212 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 C3orf14Q9HBI5 128 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 RRAGDQ9NQL2 400 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 HOMER3Q9NSC5 361 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 PCSK1NQ9UHG2 260 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 STOML2Q9UJZ1 356 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 PACSIN2Q9UNF0 486 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 ZNF510Q9Y2H8 683 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 MTCH2Q9Y6C9 303 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 F5P12259 2224 aa4.17□□□□□ -1.74
HMGB3P19-201ENST00000403971 REV3LO60673 3130 aa4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 IGLV3-10A0A075B6K4 115 aa4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 hCG_1818297A0A087WSY0 165 aa4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 A0A087X0K7 114 aa4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 LRRD1A4D1F6 860 aa4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 APOC4-APOC2K7ER74 178 aa4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 EEF2KO00418 725 aaKnown RBP4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 CEACAM4O75871 244 aa4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 GOSR1O95249 250 aa4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 APOC2P02655 101 aa4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 FGGP02679 453 aa4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 IL4RP24394 825 aa4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 PDHA2P29803 388 aa4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 CCR2P41597 374 aa4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 SSR1P43307 286 aaKnown RBP4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 STX1BP61266 288 aa4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 ERVK11-1P61568 191 aa4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 CYCSP99999 105 aaKnown RBP4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 DHODHQ02127 395 aa4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 DPYSL3Q14195 570 aa4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 MAPK11Q15759 364 aa4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 PRAMEF8Q5VWM4 474 aa4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 MFSD7Q6UXD7 560 aa4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 LRRC31Q6UY01 552 aa4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 FRRS1Q6ZNA5 592 aa4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 BZW1Q7L1Q6 419 aaKnown RBP4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 ZER1Q7Z7L7 766 aa4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 ASPGQ86U10 573 aa4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 CCDC50Q8IVM0 306 aa4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 DND1Q8IYX4 353 aaKnown RBP4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 SLC22A15Q8IZD6 547 aa4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 CMTM8Q8IZV2 173 aa4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 CCDC185Q8N715 623 aa4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 SPATA4Q8NEY3 305 aa4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 NUP37Q8NFH4 326 aa4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 RPLP0P6Q8NHW5 317 aa4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 RAPGEF5Q92565 580 aa4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 BPIFA2Q96DR5 249 aa4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 C18orf12Q96KH6 178 aa4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 RUNDC3BQ96NL0 473 aa4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 RNF157Q96PX1 679 aa4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 DDX50Q9BQ39 737 aaKnown RBP4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 CALN1Q9BXU9 219 aa4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 SLC5A7Q9GZV3 580 aa4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 NACA2Q9H009 215 aa4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 DHX35Q9H5Z1 703 aaKnown RBP4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 LRRC19Q9H756 370 aa4.16□□□□□ -1.74
HMGB3P19-201ENST00000403971 B3GAT2Q9NPZ5 323 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms