RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 AKTIPQ9H8T0 292 aa5.23□□□□□ -1.57
HMGB1P20-201ENST00000402555 SSU72Q9NP77 194 aaKnown RBP5.23□□□□□ -1.57
HMGB1P20-201ENST00000402555 ACSS1Q9NUB1 689 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P20-201ENST00000402555 ZCCHC3Q9NUD5 404 aaKnown RBP5.23□□□□□ -1.57
HMGB1P20-201ENST00000402555 TAS2R10Q9NYW0 307 aa5.23□□□□□ -1.57
HMGB1P20-201ENST00000402555 PPP4R1LQ9P1A2 415 aa5.23□□□□□ -1.57
HMGB1P20-201ENST00000402555 EIF3LQ9Y262 564 aaKnown RBP5.23□□□□□ -1.57
HMGB1P20-201ENST00000402555 RAP2CQ9Y3L5 183 aa5.23□□□□□ -1.57
HMGB1P20-201ENST00000402555 SNX8Q9Y5X2 465 aa5.23□□□□□ -1.57
HMGB1P20-201ENST00000402555 KCNE3Q9Y6H6 103 aa5.23□□□□□ -1.57
HMGB1P20-201ENST00000402555 HIVEP1P15822 2718 aa5.23□□□□□ -1.57
HMGB1P20-201ENST00000402555 CELSR1Q9NYQ6 3014 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 CLCA1A8K7I4 914 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 AHRRA9YTQ3 701 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 C9JVG2 144 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 H0Y3Z8 333 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 H0YC42 278 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 CFLARO15519 480 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 ZIC3O60481 467 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 KCNK2O95069 426 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 KCNH1O95259 989 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 ANGPTL1O95841 491 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 ACTL6AO96019 429 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 HMGN2P05204 90 aaKnown RBP5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 HOXD4P09016 255 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 IFI6P09912 130 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 ALOX5P09917 674 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 MYZAPP0CAP1 466 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 IGFBP2P18065 325 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 HK1P19367 917 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 BMP5P22003 454 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 CEACAM8P31997 349 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 PTGER4P35408 488 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 GCKP35557 465 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 SOAT1P35610 550 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 CCT3P49368 545 aaKnown RBP5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 LHX2P50458 406 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 RPL14P50914 215 aaKnown RBP5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 ZNF136P52737 540 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 TPD52P55327 224 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 GFRA1P56159 465 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 NME5P56597 212 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 CLDN18P56856 261 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 MAGOHP61326 146 aaKnown RBP5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 RPS26P62854 115 aaKnown RBP5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 PSPHP78330 225 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 TLE4Q04727 773 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 EMX2Q04743 252 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 FOXF2Q12947 444 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 STX3Q13277 289 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 TP53BP2Q13625 1128 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 SPDYE7PQ495Y7 208 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 BEND6Q5SZJ8 279 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 RAET1LQ5VY80 246 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 NSUN5P2Q63ZY6 315 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 OR4F3Q6IEY1 312 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 POMZP3Q6PJE2 187 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 OLIG3Q7RTU3 272 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 LACC1Q8IV20 430 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 PM20D2Q8IYS1 436 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 UBQLNLQ8IYU4 475 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 CLECL1Q8IZS7 167 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 FADS6Q8N9I5 356 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 CDRT4Q8N9R6 151 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 C9orf106Q8NAJ2 232 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 ACBD4Q8NC06 268 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 OR4C3Q8NH37 302 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 OR5AK3PQ8NH89 298 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 CEP70Q8NHQ1 597 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 OR5P2Q8WZ92 322 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 HOXB13Q92826 284 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 CDS1Q92903 461 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 COQ8BQ96D53 544 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 SH3YL1Q96HL8 342 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 LURAP1Q96LR2 239 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 MS4A4EQ96PG1 132 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 NPAS1Q99742 590 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 TREX2Q9BQ50 279 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 G6PC3Q9BUM1 346 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 DUSP26Q9BV47 211 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 TBL1XR1Q9BZK7 514 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 C3orf14Q9HBI5 128 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 TMBIM4Q9HC24 238 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 FAM120CQ9NX05 1096 aaKnown RBP5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 GIN1Q9NXP7 522 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 DNAJB12Q9NXW2 375 aaKnown RBP5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 NTMQ9P121 344 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 MARCOQ9UEW3 520 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 MRTO4Q9UKD2 239 aaKnown RBP5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 ABCG2Q9UNQ0 655 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 PCDHGB3Q9Y5G1 929 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 ACTL7BQ9Y614 415 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 CSMD2Q7Z408 3487 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 ROS1P08922 2347 aa5.22□□□□□ -1.57
HMGB1P20-201ENST00000402555 ITPR3Q14573 2671 aa5.21□□□□□ -1.57
HMGB1P20-201ENST00000402555 GOLGA8QA0A0J9YX86 632 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 OR2M5A3KFT3 312 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 GOLGA8OA6NCC3 632 aa5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 MBD3L4A6NDZ8 208 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P20-201ENST00000402555 MBD3L3A6NE82 208 aaPredicted RBP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms