RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 ZNF367Q7RTV3 350 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 UBE2ZQ9H832 354 aaPredicted RBP10.68□□□□□ -0.7
TTC28-201ENST00000397906 ZNF223Q9UK11 482 aaPredicted RBP10.68□□□□□ -0.7
TTC28-201ENST00000397906 ZBTB42B2RXF5 422 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 ADAP00813 363 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 CLDN10P78369 228 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 GLO1Q04760 184 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 ZNF404Q494X3 552 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 TP53I3Q53FA7 332 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 TOMM40LQ969M1 308 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 FEVQ99581 238 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 PHYHO14832 338 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 SLC6A8P48029 635 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 TUBA1BP68363 451 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 TUBA4AP68366 448 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 TUBA1AQ71U36 451 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 AP1M2Q9Y6Q5 423 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 DCDC2BA2VCK2 349 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 HSPB6O14558 160 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 SHOXO15266 292 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 OR2A12Q8NGT7 310 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 C7orf34Q96L11 122 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 ST6GALNAC5Q9BVH7 336 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 FAM118AQ9NWS6 357 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 RASAL1O95294 804 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 RRADP55042 308 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 POU3F1Q03052 451 aaPredicted RBP10.68□□□□□ -0.7
TTC28-201ENST00000397906 LRRN1Q6UXK5 716 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 PPP1R14DQ9NXH3 145 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 LHX3Q9UBR4 397 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 IER3IP1Q9Y5U9 82 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 SETD1AO15047 1707 aaKnown RBP10.68□□□□□ -0.7
TTC28-201ENST00000397906 H0YGG7 62 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 ZNF140P52738 457 aaPredicted RBP10.68□□□□□ -0.7
TTC28-201ENST00000397906 INHBCP55103 352 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 TRAM1Q15629 374 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 RAB11BQ15907 218 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 OR13H1Q8NG92 308 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 C12orf49Q9H741 205 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 TM7SF3Q9NS93 570 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 ANTXRLA6NF34 631 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 NKX3-2P78367 333 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 PGM2L1Q6PCE3 622 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 C12orf43Q96C57 262 aaKnown RBP10.68□□□□□ -0.7
TTC28-201ENST00000397906 TIMM29Q9BSF4 260 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 CXCL16Q9H2A7 254 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 PET100P0DJ07 73 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 S100A2P29034 98 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 NKPD1Q17RQ9 610 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 ADIPOR2Q86V24 386 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 ZNF317Q96PQ6 595 aaPredicted RBP10.68□□□□□ -0.7
TTC28-201ENST00000397906 CD93Q9NPY3 652 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 PTTG2Q9NZH5 202 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 MITFO75030 526 aaPredicted RBP10.68□□□□□ -0.7
TTC28-201ENST00000397906 KNG1P01042 644 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 FUT1P19526 365 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 DCTP40126 519 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 CCDC58Q4VC31 144 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 CTSL3PQ5NE16 218 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 ZNF773Q6PK81 442 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 VRK2Q86Y07 508 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 AP1G1O43747 822 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 CTHP32929 405 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 IDUAP35475 653 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 TMEM64Q6YI46 380 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 SPPL3Q8TCT6 385 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 ZNF431Q8TF32 576 aaPredicted RBP10.67□□□□□ -0.7
TTC28-201ENST00000397906 ZNF480Q8WV37 535 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 TBC1D20Q96BZ9 403 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 TOXO94900 526 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 ZNF585AQ6P3V2 769 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 RRNAD1Q96FB5 475 aaKnown RBP10.67□□□□□ -0.7
TTC28-201ENST00000397906 MARCH5Q9NX47 278 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.67□□□□□ -0.7
TTC28-201ENST00000397906 ZCWPW2A0A1B0GU75 182 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 KDM4EB2RXH2 506 aaPredicted RBP10.67□□□□□ -0.7
TTC28-201ENST00000397906 CBX7O95931 251 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 IFNA5P01569 189 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 STEAP4Q687X5 459 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 ACBD7Q8N6N7 88 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 PLEKHA3Q9HB20 300 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 OR6C2Q9NZP2 312 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 NDUFB2O95178 105 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 PKDCCQ504Y2 493 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 GLYATL2Q8WU03 294 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 HCAR1Q9BXC0 346 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 SLC6A16Q9GZN6 736 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 SACM1LQ9NTJ5 587 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 GGT1P19440 569 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 GPR18Q14330 331 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 IL17RDQ8NFM7 739 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 S100PBPQ96BU1 408 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 SEC14L4Q9UDX3 406 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 A0A1B0GTW7 788 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 NPR2P20594 1047 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 CRABP1P29762 137 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 SLC5A2P31639 672 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 SSR4P51571 173 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 KDELC1Q6UW63 502 aa10.67□□□□□ -0.7
TTC28-201ENST00000397906 RTL10Q7L3V2 364 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms