RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 ABTB1Q969K4 478 aaPredicted RBP23.07■■□□□ 1.28
TSPAN4-207ENST00000397411 ROPN1LQ96C74 230 aa23.07■■□□□ 1.28
TSPAN4-207ENST00000397411 PHF12Q96QT6 1004 aa23.07■■□□□ 1.28
TSPAN4-207ENST00000397411 OR2B2Q9GZK3 357 aa23.07■■□□□ 1.28
TSPAN4-207ENST00000397411 TPT1P8Q9HAU6 139 aa23.07■■□□□ 1.28
TSPAN4-207ENST00000397411 SLC6A13Q9NSD5 602 aa23.07■■□□□ 1.28
TSPAN4-207ENST00000397411 KLHL14Q9P2G3 628 aa23.07■■□□□ 1.28
TSPAN4-207ENST00000397411 MKLN1Q9UL63 735 aa23.07■■□□□ 1.28
TSPAN4-207ENST00000397411 RPH3AQ9Y2J0 694 aaPredicted RBP23.07■■□□□ 1.28
TSPAN4-207ENST00000397411 MEMO1Q9Y316 297 aa23.07■■□□□ 1.28
TSPAN4-207ENST00000397411 MRPS18CQ9Y3D5 142 aaKnown RBP23.07■■□□□ 1.28
TSPAN4-207ENST00000397411 HRH3Q9Y5N1 445 aa23.07■■□□□ 1.28
TSPAN4-207ENST00000397411 TENM4Q6N022 2769 aa23.06■■□□□ 1.28
TSPAN4-207ENST00000397411 A0A096LPI6 279 aa23.06■■□□□ 1.28
TSPAN4-207ENST00000397411 FIGNL2A6NMB9 653 aa23.06■■□□□ 1.28
TSPAN4-207ENST00000397411 LDLRP01130 860 aa23.06■■□□□ 1.28
TSPAN4-207ENST00000397411 MSX1P28360 303 aa23.06■■□□□ 1.28
TSPAN4-207ENST00000397411 TMEM211Q6ICI0 200 aa23.06■■□□□ 1.28
TSPAN4-207ENST00000397411 HEPHL1Q6MZM0 1159 aa23.06■■□□□ 1.28
TSPAN4-207ENST00000397411 CGB2Q6NT52 195 aa23.06■■□□□ 1.28
TSPAN4-207ENST00000397411 FADS6Q8N9I5 356 aa23.06■■□□□ 1.28
TSPAN4-207ENST00000397411 SH3YL1Q96HL8 342 aaPredicted RBP23.06■■□□□ 1.28
TSPAN4-207ENST00000397411 SFXN2Q96NB2 322 aa23.06■■□□□ 1.28
TSPAN4-207ENST00000397411 PAIP1Q9H074 479 aaKnown RBP23.06■■□□□ 1.28
TSPAN4-207ENST00000397411 RAD21L1Q9H4I0 556 aa23.06■■□□□ 1.28
TSPAN4-207ENST00000397411 MRGBPQ9NV56 204 aa23.06■■□□□ 1.28
TSPAN4-207ENST00000397411 LIPT1Q9Y234 373 aa23.06■■□□□ 1.28
TSPAN4-207ENST00000397411 WDR45Q9Y484 360 aa23.06■■□□□ 1.28
TSPAN4-207ENST00000397411 PCDHB14Q9Y5E9 798 aa23.06■■□□□ 1.28
TSPAN4-207ENST00000397411 A0A1W2PP18 115 aa23.05■■□□□ 1.28
TSPAN4-207ENST00000397411 A0A1W2PQD3 144 aa23.05■■□□□ 1.28
TSPAN4-207ENST00000397411 FAM47E-STBD1D6RA91 191 aa23.05■■□□□ 1.28
TSPAN4-207ENST00000397411 E9PLN8 166 aa23.05■■□□□ 1.28
TSPAN4-207ENST00000397411 HMGN4O00479 90 aa23.05■■□□□ 1.28
TSPAN4-207ENST00000397411 ANGPT2O15123 496 aa23.05■■□□□ 1.28
TSPAN4-207ENST00000397411 ACTL6AO96019 429 aa23.05■■□□□ 1.28
TSPAN4-207ENST00000397411 C1QCP02747 245 aa23.05■■□□□ 1.28
TSPAN4-207ENST00000397411 NR2F1P10589 423 aa23.05■■□□□ 1.28
TSPAN4-207ENST00000397411 BMP7P18075 431 aa23.05■■□□□ 1.28
TSPAN4-207ENST00000397411 ENDOUP21128 410 aaKnown RBP23.05■■□□□ 1.28
TSPAN4-207ENST00000397411 MAGEA8P43361 318 aa23.05■■□□□ 1.28
TSPAN4-207ENST00000397411 RNF144AP50876 292 aaPredicted RBP23.05■■□□□ 1.28
TSPAN4-207ENST00000397411 SMSP52788 366 aa23.05■■□□□ 1.28
TSPAN4-207ENST00000397411 GTDC1Q4AE62 458 aa23.05■■□□□ 1.28
TSPAN4-207ENST00000397411 COX20Q5RI15 118 aa23.05■■□□□ 1.28
TSPAN4-207ENST00000397411 DDX59Q5T1V6 619 aaKnown RBP eCLIP23.05■■□□□ 1.285e-6■■■■□ 22.8
TSPAN4-207ENST00000397411 AAGABQ6PD74 315 aa23.05■■□□□ 1.28
TSPAN4-207ENST00000397411 MTERF4Q7Z6M4 381 aaKnown RBP23.05■■□□□ 1.28
TSPAN4-207ENST00000397411 ZNF317Q96PQ6 595 aaPredicted RBP23.05■■□□□ 1.28
TSPAN4-207ENST00000397411 VKORC1Q9BQB6 163 aa23.05■■□□□ 1.28
TSPAN4-207ENST00000397411 POLE3Q9NRF9 147 aa23.05■■□□□ 1.28
TSPAN4-207ENST00000397411 LEF1Q9UJU2 399 aaPredicted RBP23.05■■□□□ 1.28
TSPAN4-207ENST00000397411 CAMK2AQ9UQM7 478 aa23.05■■□□□ 1.28
TSPAN4-207ENST00000397411 NDUFAF1Q9Y375 327 aa23.05■■□□□ 1.28
TSPAN4-207ENST00000397411 DTNAQ9Y4J8 743 aa23.05■■□□□ 1.28
TSPAN4-207ENST00000397411 PCNX3Q9H6A9 2034 aa23.04■■□□□ 1.28
TSPAN4-207ENST00000397411 TMEM247A6NEH6 219 aa23.04■■□□□ 1.28
TSPAN4-207ENST00000397411 CLIC1O00299 241 aa23.04■■□□□ 1.28
TSPAN4-207ENST00000397411 FCMRO60667 390 aa23.04■■□□□ 1.28
TSPAN4-207ENST00000397411 ZG16O60844 167 aa23.04■■□□□ 1.28
TSPAN4-207ENST00000397411 CAPN3P20807 821 aa23.04■■□□□ 1.28
TSPAN4-207ENST00000397411 ACVR2AP27037 513 aa23.04■■□□□ 1.28
TSPAN4-207ENST00000397411 GANABQ14697 944 aaKnown RBP23.04■■□□□ 1.28
TSPAN4-207ENST00000397411 ZNF630Q2M218 657 aaPredicted RBP23.04■■□□□ 1.28
TSPAN4-207ENST00000397411 KLHL26Q53HC5 615 aa23.04■■□□□ 1.28
TSPAN4-207ENST00000397411 VASNQ6EMK4 673 aa23.04■■□□□ 1.28
TSPAN4-207ENST00000397411 ENPP6Q6UWR7 440 aa23.04■■□□□ 1.28
TSPAN4-207ENST00000397411 OLIG3Q7RTU3 272 aa23.04■■□□□ 1.28
TSPAN4-207ENST00000397411 B4GALNT2Q8NHY0 566 aa23.04■■□□□ 1.28
TSPAN4-207ENST00000397411 AURKBQ96GD4 344 aaPredicted RBP23.04■■□□□ 1.28
TSPAN4-207ENST00000397411 CCDC120Q96HB5 630 aa23.04■■□□□ 1.28
TSPAN4-207ENST00000397411 TIMP4Q99727 224 aa23.04■■□□□ 1.28
TSPAN4-207ENST00000397411 UGT2B28Q9BY64 529 aa23.04■■□□□ 1.28
TSPAN4-207ENST00000397411 NMUR2Q9GZQ4 415 aa23.04■■□□□ 1.28
TSPAN4-207ENST00000397411 ADAM10O14672 748 aa23.03■■□□□ 1.28
TSPAN4-207ENST00000397411 HCRTR2O43614 444 aa23.03■■□□□ 1.28
TSPAN4-207ENST00000397411 ZIC3O60481 467 aa23.03■■□□□ 1.28
TSPAN4-207ENST00000397411 WDR1O75083 606 aa23.03■■□□□ 1.28
TSPAN4-207ENST00000397411 SNRPB2P08579 225 aaKnown RBP23.03■■□□□ 1.28
TSPAN4-207ENST00000397411 GABRA1P14867 456 aa23.03■■□□□ 1.28
TSPAN4-207ENST00000397411 SF3B4Q15427 424 aaKnown RBP eCLIP23.03■■□□□ 1.282e-7■■■■■ 32.9
TSPAN4-207ENST00000397411 EMC4Q5J8M3 183 aa23.03■■□□□ 1.28
TSPAN4-207ENST00000397411 PAGE3Q5JUK9 113 aa23.03■■□□□ 1.28
TSPAN4-207ENST00000397411 PDZK1Q5T2W1 519 aa23.03■■□□□ 1.28
TSPAN4-207ENST00000397411 RAET1LQ5VY80 246 aa23.03■■□□□ 1.28
TSPAN4-207ENST00000397411 PM20D2Q8IYS1 436 aa23.03■■□□□ 1.28
TSPAN4-207ENST00000397411 C1GALT1C1Q96EU7 318 aa23.03■■□□□ 1.28
TSPAN4-207ENST00000397411 ZNF350Q9GZX5 532 aa23.03■■□□□ 1.28
TSPAN4-207ENST00000397411 ZNF385DQ9H6B1 395 aa23.03■■□□□ 1.28
TSPAN4-207ENST00000397411 NIPSNAP3AQ9UFN0 247 aaPredicted RBP23.03■■□□□ 1.28
TSPAN4-207ENST00000397411 IGLV3-32A0A0A0MS00 114 aa23.02■■□□□ 1.28
TSPAN4-207ENST00000397411 NUDT14O95848 222 aa23.02■■□□□ 1.28
TSPAN4-207ENST00000397411 HOXD4P09016 255 aaPredicted RBP23.02■■□□□ 1.28
TSPAN4-207ENST00000397411 ETFAP13804 333 aa23.02■■□□□ 1.28
TSPAN4-207ENST00000397411 ZNF41P51814 821 aaPredicted RBP23.02■■□□□ 1.28
TSPAN4-207ENST00000397411 DSTNP60981 165 aa23.02■■□□□ 1.28
TSPAN4-207ENST00000397411 CRYZQ08257 329 aaKnown RBP23.02■■□□□ 1.28
TSPAN4-207ENST00000397411 SYPL1Q16563 259 aa23.02■■□□□ 1.28
TSPAN4-207ENST00000397411 NHSL2Q5HYW2 709 aa23.02■■□□□ 1.28
TSPAN4-207ENST00000397411 RPTNQ6XPR3 784 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms