RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 HOXD1Q9GZZ0 328 aa19.28■□□□□ 0.68
TSPAN4-206ENST00000397408 SLC25A37Q9NYZ2 338 aa19.28■□□□□ 0.68
TSPAN4-206ENST00000397408 MED11Q9P086 117 aa19.28■□□□□ 0.68
TSPAN4-206ENST00000397408 SLC5A6Q9Y289 635 aa19.28■□□□□ 0.68
TSPAN4-206ENST00000397408 DIDO1Q9BTC0 2240 aaKnown RBP19.28■□□□□ 0.68
TSPAN4-206ENST00000397408 C15orf38-AP3S2A0A0A6YYH1 394 aa19.27■□□□□ 0.68
TSPAN4-206ENST00000397408 A0A1W2PQD3 144 aa19.27■□□□□ 0.68
TSPAN4-206ENST00000397408 CLEC18AA5D8T8 446 aa19.27■□□□□ 0.68
TSPAN4-206ENST00000397408 OR14I1A6ND48 311 aa19.27■□□□□ 0.68
TSPAN4-206ENST00000397408 NPIPB9F8W1W9 429 aa19.27■□□□□ 0.68
TSPAN4-206ENST00000397408 ANGPT2O15123 496 aa19.27■□□□□ 0.68
TSPAN4-206ENST00000397408 LRRTM2O43300 516 aa19.27■□□□□ 0.68
TSPAN4-206ENST00000397408 SNRPB2P08579 225 aaKnown RBP19.27■□□□□ 0.68
TSPAN4-206ENST00000397408 ETFAP13804 333 aa19.27■□□□□ 0.68
TSPAN4-206ENST00000397408 SRD5A2P31213 254 aa19.27■□□□□ 0.68
TSPAN4-206ENST00000397408 CRATP43155 626 aa19.27■□□□□ 0.68
TSPAN4-206ENST00000397408 MAGEA8P43361 318 aa19.27■□□□□ 0.68
TSPAN4-206ENST00000397408 RNF144AP50876 292 aaPredicted RBP19.27■□□□□ 0.68
TSPAN4-206ENST00000397408 CD226Q15762 336 aa19.27■□□□□ 0.68
TSPAN4-206ENST00000397408 GPAT3Q53EU6 434 aa19.27■□□□□ 0.68
TSPAN4-206ENST00000397408 CLEC18BQ6UXF7 455 aa19.27■□□□□ 0.68
TSPAN4-206ENST00000397408 FJX1Q86VR8 437 aa19.27■□□□□ 0.68
TSPAN4-206ENST00000397408 MSRB3Q8IXL7 192 aa19.27■□□□□ 0.68
TSPAN4-206ENST00000397408 CLEC18CQ8NCF0 446 aa19.27■□□□□ 0.68
TSPAN4-206ENST00000397408 OR14L1PQ8NHC6 308 aa19.27■□□□□ 0.68
TSPAN4-206ENST00000397408 TSPEARQ8WU66 669 aa19.27■□□□□ 0.68
TSPAN4-206ENST00000397408 ELAC2Q9BQ52 826 aaKnown RBP19.27■□□□□ 0.68
TSPAN4-206ENST00000397408 NMUR2Q9GZQ4 415 aa19.27■□□□□ 0.68
TSPAN4-206ENST00000397408 ERRFI1Q9UJM3 462 aaPredicted RBP19.27■□□□□ 0.68
TSPAN4-206ENST00000397408 MKLN1Q9UL63 735 aa19.27■□□□□ 0.68
TSPAN4-206ENST00000397408 SLC6A5Q9Y345 797 aa19.27■□□□□ 0.68
TSPAN4-206ENST00000397408 NDUFAF1Q9Y375 327 aa19.27■□□□□ 0.68
TSPAN4-206ENST00000397408 WDR45Q9Y484 360 aa19.27■□□□□ 0.68
TSPAN4-206ENST00000397408 MED12Q93074 2177 aa19.26■□□□□ 0.67
TSPAN4-206ENST00000397408 IGLV3-32A0A0A0MS00 114 aa19.26■□□□□ 0.67
TSPAN4-206ENST00000397408 A0A1B0GUH1 482 aa19.26■□□□□ 0.67
TSPAN4-206ENST00000397408 PRAMEF27A3QJZ7 478 aa19.26■□□□□ 0.67
TSPAN4-206ENST00000397408 CLIC1O00299 241 aa19.26■□□□□ 0.67
TSPAN4-206ENST00000397408 GMFGO60234 142 aa19.26■□□□□ 0.67
TSPAN4-206ENST00000397408 KIAA0513O60268 411 aa19.26■□□□□ 0.67
TSPAN4-206ENST00000397408 DRD4P21917 467 aa19.26■□□□□ 0.67
TSPAN4-206ENST00000397408 TCEA1P23193 301 aaKnown RBP19.26■□□□□ 0.67
TSPAN4-206ENST00000397408 DPP4P27487 766 aa19.26■□□□□ 0.67
TSPAN4-206ENST00000397408 KLF10Q13118 480 aa19.26■□□□□ 0.67
TSPAN4-206ENST00000397408 KLHL26Q53HC5 615 aa19.26■□□□□ 0.67
TSPAN4-206ENST00000397408 MISPQ8IVT2 679 aa19.26■□□□□ 0.67
TSPAN4-206ENST00000397408 ANKFN1Q8N957 763 aa19.26■□□□□ 0.67
TSPAN4-206ENST00000397408 SARAFQ96BY9 339 aa19.26■□□□□ 0.67
TSPAN4-206ENST00000397408 POLE3Q9NRF9 147 aa19.26■□□□□ 0.67
TSPAN4-206ENST00000397408 TAS2R10Q9NYW0 307 aa19.26■□□□□ 0.67
TSPAN4-206ENST00000397408 VAPAQ9P0L0 249 aa19.26■□□□□ 0.67
TSPAN4-206ENST00000397408 ACAD8Q9UKU7 415 aa19.26■□□□□ 0.67
TSPAN4-206ENST00000397408 LIPT1Q9Y234 373 aa19.26■□□□□ 0.67
TSPAN4-206ENST00000397408 MYO7BQ6PIF6 2116 aa19.26■□□□□ 0.67
TSPAN4-206ENST00000397408 TRBV5-3A0A0A0MS03 114 aa19.25■□□□□ 0.67
TSPAN4-206ENST00000397408 CENPVL1A0A0U1RR11 272 aa19.25■□□□□ 0.67
TSPAN4-206ENST00000397408 GMNCA6NCL1 334 aa19.25■□□□□ 0.67
TSPAN4-206ENST00000397408 BCKDKO14874 412 aa19.25■□□□□ 0.67
TSPAN4-206ENST00000397408 TNFRSF21O75509 655 aa19.25■□□□□ 0.67
TSPAN4-206ENST00000397408 H6PDO95479 791 aa19.25■□□□□ 0.67
TSPAN4-206ENST00000397408 DSCR4P56555 118 aaPredicted RBP19.25■□□□□ 0.67
TSPAN4-206ENST00000397408 DSTNP60981 165 aa19.25■□□□□ 0.67
TSPAN4-206ENST00000397408 SYPL1Q16563 259 aa19.25■□□□□ 0.67
TSPAN4-206ENST00000397408 PDZK1Q5T2W1 519 aa19.25■□□□□ 0.67
TSPAN4-206ENST00000397408 TYW3Q6IPR3 259 aaKnown RBP19.25■□□□□ 0.67
TSPAN4-206ENST00000397408 C3P1Q6ZMU1 363 aa19.25■□□□□ 0.67
TSPAN4-206ENST00000397408 FRRS1Q6ZNA5 592 aa19.25■□□□□ 0.67
TSPAN4-206ENST00000397408 DHDDSQ86SQ9 333 aa19.25■□□□□ 0.67
TSPAN4-206ENST00000397408 RETREG3Q86VR2 466 aa19.25■□□□□ 0.67
TSPAN4-206ENST00000397408 DOLPP1Q86YN1 238 aa19.25■□□□□ 0.67
TSPAN4-206ENST00000397408 OR5M9Q8NGP3 310 aa19.25■□□□□ 0.67
TSPAN4-206ENST00000397408 RELTQ969Z4 430 aa19.25■□□□□ 0.67
TSPAN4-206ENST00000397408 SH3YL1Q96HL8 342 aaPredicted RBP19.25■□□□□ 0.67
TSPAN4-206ENST00000397408 RAD21L1Q9H4I0 556 aa19.25■□□□□ 0.67
TSPAN4-206ENST00000397408 PTGES2Q9H7Z7 377 aa19.25■□□□□ 0.67
TSPAN4-206ENST00000397408 HHATLQ9HCP6 504 aa19.25■□□□□ 0.67
TSPAN4-206ENST00000397408 P2RX2Q9UBL9 471 aa19.25■□□□□ 0.67
TSPAN4-206ENST00000397408 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.25■□□□□ 0.67
TSPAN4-206ENST00000397408 DTNAQ9Y4J8 743 aa19.25■□□□□ 0.67
TSPAN4-206ENST00000397408 CAPN7Q9Y6W3 813 aa19.25■□□□□ 0.67
TSPAN4-206ENST00000397408 H3BNH8 94 aa19.25■□□□□ 0.67
TSPAN4-206ENST00000397408 CCL21O00585 134 aa19.25■□□□□ 0.67
TSPAN4-206ENST00000397408 CHRM4P08173 479 aa19.25■□□□□ 0.67
TSPAN4-206ENST00000397408 GUSBP08236 651 aa19.25■□□□□ 0.67
TSPAN4-206ENST00000397408 NR2F1P10589 423 aa19.25■□□□□ 0.67
TSPAN4-206ENST00000397408 GANABQ14697 944 aaKnown RBP19.25■□□□□ 0.67
TSPAN4-206ENST00000397408 RGNQ15493 299 aa19.25■□□□□ 0.67
TSPAN4-206ENST00000397408 ZNF141Q15928 474 aa19.25■□□□□ 0.67
TSPAN4-206ENST00000397408 CPLX4Q7Z7G2 160 aa19.25■□□□□ 0.67
TSPAN4-206ENST00000397408 IFNEQ86WN2 208 aa19.25■□□□□ 0.67
TSPAN4-206ENST00000397408 ZNF619Q8N2I2 560 aa19.25■□□□□ 0.67
TSPAN4-206ENST00000397408 DPP10Q8N608 796 aa19.25■□□□□ 0.67
TSPAN4-206ENST00000397408 PHOSPHO1Q8TCT1 267 aa19.25■□□□□ 0.67
TSPAN4-206ENST00000397408 C1GALT1C1Q96EU7 318 aa19.25■□□□□ 0.67
TSPAN4-206ENST00000397408 TRNT1Q96Q11 434 aaKnown RBP19.25■□□□□ 0.67
TSPAN4-206ENST00000397408 PNPLA3Q9NST1 481 aa19.25■□□□□ 0.67
TSPAN4-206ENST00000397408 ARMCX1Q9P291 453 aa19.25■□□□□ 0.67
TSPAN4-206ENST00000397408 KCNE5Q9UJ90 142 aa19.25■□□□□ 0.67
TSPAN4-206ENST00000397408 RPH3AQ9Y2J0 694 aaPredicted RBP19.25■□□□□ 0.67
TSPAN4-206ENST00000397408 HCRTR2O43614 444 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 161 ms