RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 P2RY6Q15077 328 aa13.29□□□□□ -0.28
SEC13-206ENST00000397102 TMEM201Q5SNT2 666 aa13.29□□□□□ -0.28
SEC13-206ENST00000397102 MROH9Q5TGP6 573 aa13.29□□□□□ -0.28
SEC13-206ENST00000397102 HBMQ6B0K9 141 aa13.29□□□□□ -0.28
SEC13-206ENST00000397102 LETMD1Q6P1Q0 360 aa13.29□□□□□ -0.28
SEC13-206ENST00000397102 CREG2Q8IUH2 290 aa13.29□□□□□ -0.28
SEC13-206ENST00000397102 BANPQ8N9N5 519 aa13.29□□□□□ -0.28
SEC13-206ENST00000397102 RNF128Q8TEB7 428 aa13.29□□□□□ -0.28
SEC13-206ENST00000397102 FBF1Q8TES7 1133 aa13.29□□□□□ -0.28
SEC13-206ENST00000397102 ZBTB8AQ96BR9 441 aa13.29□□□□□ -0.28
SEC13-206ENST00000397102 CACNG6Q9BXT2 260 aa13.29□□□□□ -0.28
SEC13-206ENST00000397102 HHATLQ9HCP6 504 aa13.29□□□□□ -0.28
SEC13-206ENST00000397102 MALRD1Q5VYJ5 2156 aa13.28□□□□□ -0.28
SEC13-206ENST00000397102 HMX2A2RU54 273 aa13.28□□□□□ -0.28
SEC13-206ENST00000397102 PCDH7O60245 1069 aa13.28□□□□□ -0.28
SEC13-206ENST00000397102 UTS2O95399 124 aa13.28□□□□□ -0.28
SEC13-206ENST00000397102 ADAP00813 363 aa13.28□□□□□ -0.28
SEC13-206ENST00000397102 IGHV4-31P0DP07 118 aa13.28□□□□□ -0.28
SEC13-206ENST00000397102 HSD3B1P14060 373 aa13.28□□□□□ -0.28
SEC13-206ENST00000397102 HSD3B2P26439 372 aa13.28□□□□□ -0.28
SEC13-206ENST00000397102 RFX3P48380 749 aa13.28□□□□□ -0.28
SEC13-206ENST00000397102 ITGADQ13349 1161 aa13.28□□□□□ -0.28
SEC13-206ENST00000397102 RNPS1Q15287 305 aaKnown RBP13.28□□□□□ -0.28
SEC13-206ENST00000397102 ZNHIT3Q15649 155 aaPredicted RBP13.28□□□□□ -0.28
SEC13-206ENST00000397102 ZNF239Q16600 458 aaKnown RBP13.28□□□□□ -0.28
SEC13-206ENST00000397102 APOOLQ6UXV4 268 aa13.28□□□□□ -0.28
SEC13-206ENST00000397102 NUFIP2Q7Z417 695 aaKnown RBP13.28□□□□□ -0.28
SEC13-206ENST00000397102 CCDC25Q86WR0 208 aa13.28□□□□□ -0.28
SEC13-206ENST00000397102 TDRPQ86YL5 185 aa13.28□□□□□ -0.28
SEC13-206ENST00000397102 ARIH2OSQ8N7S6 290 aa13.28□□□□□ -0.28
SEC13-206ENST00000397102 ABHD3Q8WU67 409 aa13.28□□□□□ -0.28
SEC13-206ENST00000397102 SLC9A6Q92581 669 aa13.28□□□□□ -0.28
SEC13-206ENST00000397102 OSTF1Q92882 214 aa13.28□□□□□ -0.28
SEC13-206ENST00000397102 RNF145Q96MT1 663 aa13.28□□□□□ -0.28
SEC13-206ENST00000397102 NPAS1Q99742 590 aa13.28□□□□□ -0.28
SEC13-206ENST00000397102 DPH5Q9H2P9 285 aa13.28□□□□□ -0.28
SEC13-206ENST00000397102 KLHL13Q9P2N7 655 aa13.28□□□□□ -0.28
SEC13-206ENST00000397102 NFU1Q9UMS0 254 aa13.28□□□□□ -0.28
SEC13-206ENST00000397102 C19orf53Q9UNZ5 99 aaPredicted RBP13.28□□□□□ -0.28
SEC13-206ENST00000397102 GNG14A0A1W2PPG7 69 aa13.27□□□□□ -0.29
SEC13-206ENST00000397102 PSMG1O95456 288 aa13.27□□□□□ -0.29
SEC13-206ENST00000397102 NTN1O95631 604 aa13.27□□□□□ -0.29
SEC13-206ENST00000397102 RPS17P08708 135 aaKnown RBP13.27□□□□□ -0.29
SEC13-206ENST00000397102 RBP1P09455 135 aa13.27□□□□□ -0.29
SEC13-206ENST00000397102 PTNP21246 168 aa13.27□□□□□ -0.29
SEC13-206ENST00000397102 ME2P23368 584 aa13.27□□□□□ -0.29
SEC13-206ENST00000397102 IGFBP5P24593 272 aa13.27□□□□□ -0.29
SEC13-206ENST00000397102 TYK2P29597 1187 aa13.27□□□□□ -0.29
SEC13-206ENST00000397102 CARD18P57730 90 aa13.27□□□□□ -0.29
SEC13-206ENST00000397102 RAE1P78406 368 aaKnown RBP13.27□□□□□ -0.29
SEC13-206ENST00000397102 RUNX1T1Q06455 604 aa13.27□□□□□ -0.29
SEC13-206ENST00000397102 PLPPR5Q32ZL2 321 aa13.27□□□□□ -0.29
SEC13-206ENST00000397102 GRAMD1BQ3KR37 738 aa13.27□□□□□ -0.29
SEC13-206ENST00000397102 CPTPQ5TA50 214 aa13.27□□□□□ -0.29
SEC13-206ENST00000397102 C11orf71Q6IPW1 123 aa13.27□□□□□ -0.29
SEC13-206ENST00000397102 RPS27LQ71UM5 84 aaKnown RBP13.27□□□□□ -0.29
SEC13-206ENST00000397102 BHLHA15Q7RTS1 189 aaPredicted RBP13.27□□□□□ -0.29
SEC13-206ENST00000397102 TUSC5Q8IXB3 177 aa13.27□□□□□ -0.29
SEC13-206ENST00000397102 PLD6Q8N2A8 252 aaKnown RBP13.27□□□□□ -0.29
SEC13-206ENST00000397102 ZNF525Q8N782 197 aa13.27□□□□□ -0.29
SEC13-206ENST00000397102 CEP112Q8N8E3 955 aa13.27□□□□□ -0.29
SEC13-206ENST00000397102 C16orf78Q8WTQ4 265 aa13.27□□□□□ -0.29
SEC13-206ENST00000397102 FAM168AQ92567 244 aa13.27□□□□□ -0.29
SEC13-206ENST00000397102 PROX1Q92786 737 aa13.27□□□□□ -0.29
SEC13-206ENST00000397102 CPNE4Q96A23 557 aaPredicted RBP13.27□□□□□ -0.29
SEC13-206ENST00000397102 REXO5Q96IC2 774 aaKnown RBP13.27□□□□□ -0.29
SEC13-206ENST00000397102 KLHL15Q96M94 604 aa13.27□□□□□ -0.29
SEC13-206ENST00000397102 BBS4Q96RK4 519 aa13.27□□□□□ -0.29
SEC13-206ENST00000397102 LMF2Q9BU23 707 aaKnown RBP13.27□□□□□ -0.29
SEC13-206ENST00000397102 TMEM185BQ9H7F4 350 aa13.27□□□□□ -0.29
SEC13-206ENST00000397102 C3orf14Q9HBI5 128 aa13.27□□□□□ -0.29
SEC13-206ENST00000397102 GP6Q9HCN6 339 aa13.27□□□□□ -0.29
SEC13-206ENST00000397102 CBLN4Q9NTU7 201 aa13.27□□□□□ -0.29
SEC13-206ENST00000397102 GOLGA8QA0A0J9YX86 632 aa13.26□□□□□ -0.29
SEC13-206ENST00000397102 A0A1W2PRB8 838 aa13.26□□□□□ -0.29
SEC13-206ENST00000397102 GOLGA8OA6NCC3 632 aa13.26□□□□□ -0.29
SEC13-206ENST00000397102 MYO1GB0I1T2 1018 aa13.26□□□□□ -0.29
SEC13-206ENST00000397102 ALG1L2C9J202 215 aa13.26□□□□□ -0.29
SEC13-206ENST00000397102 GOLGA8NF8WBI6 632 aa13.26□□□□□ -0.29
SEC13-206ENST00000397102 GOLGA8RI6L899 631 aa13.26□□□□□ -0.29
SEC13-206ENST00000397102 UPK1AO00322 258 aa13.26□□□□□ -0.29
SEC13-206ENST00000397102 PPP6CO00743 305 aa13.26□□□□□ -0.29
SEC13-206ENST00000397102 ABCD4O14678 606 aa13.26□□□□□ -0.29
SEC13-206ENST00000397102 SMIM24O75264 130 aa13.26□□□□□ -0.29
SEC13-206ENST00000397102 TTKP33981 857 aa13.26□□□□□ -0.29
SEC13-206ENST00000397102 SERPINB8P50452 374 aa13.26□□□□□ -0.29
SEC13-206ENST00000397102 ZNF41P51814 821 aaPredicted RBP13.26□□□□□ -0.29
SEC13-206ENST00000397102 PPA1Q15181 289 aa13.26□□□□□ -0.29
SEC13-206ENST00000397102 RAB35Q15286 201 aa13.26□□□□□ -0.29
SEC13-206ENST00000397102 LIPNQ5VXI9 398 aa13.26□□□□□ -0.29
SEC13-206ENST00000397102 FAM219BQ5XKK7 198 aa13.26□□□□□ -0.29
SEC13-206ENST00000397102 TMEM107Q6UX40 140 aa13.26□□□□□ -0.29
SEC13-206ENST00000397102 SSX8Q7RTT4 187 aa13.26□□□□□ -0.29
SEC13-206ENST00000397102 TRABD2AQ86V40 505 aa13.26□□□□□ -0.29
SEC13-206ENST00000397102 OR2L13Q8N349 312 aa13.26□□□□□ -0.29
SEC13-206ENST00000397102 ACTRT2Q8TDY3 377 aa13.26□□□□□ -0.29
SEC13-206ENST00000397102 ZNF483Q8TF39 744 aaPredicted RBP13.26□□□□□ -0.29
SEC13-206ENST00000397102 RADILQ96JH8 1075 aa13.26□□□□□ -0.29
SEC13-206ENST00000397102 ERP44Q9BS26 406 aa13.26□□□□□ -0.29
SEC13-206ENST00000397102 VPS11Q9H270 941 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms