RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 RPS6KB2Q9UBS0 482 aa2.79□□□□□ -1.96
CMC1-202ENST00000396610 FOXJ3Q9UPW0 622 aa2.79□□□□□ -1.96
CMC1-202ENST00000396610 EIF3LQ9Y262 564 aaKnown RBP2.79□□□□□ -1.96
CMC1-202ENST00000396610 FAM230AA0A1W2PPH8 454 aa2.78□□□□□ -1.96
CMC1-202ENST00000396610 PANO1I0J062 215 aa2.78□□□□□ -1.96
CMC1-202ENST00000396610 STX11O75558 287 aa2.78□□□□□ -1.96
CMC1-202ENST00000396610 IGLV1-47P01700 117 aa2.78□□□□□ -1.96
CMC1-202ENST00000396610 BCKDHAP12694 445 aa2.78□□□□□ -1.96
CMC1-202ENST00000396610 PRG2P13727 222 aa2.78□□□□□ -1.96
CMC1-202ENST00000396610 RPA1P27694 616 aa2.78□□□□□ -1.96
CMC1-202ENST00000396610 CYLC1P35663 651 aaPredicted RBP2.78□□□□□ -1.96
CMC1-202ENST00000396610 CAV2P51636 162 aa2.78□□□□□ -1.96
CMC1-202ENST00000396610 ATXN3P54252 364 aaPredicted RBP2.78□□□□□ -1.96
CMC1-202ENST00000396610 WNT4P56705 351 aa2.78□□□□□ -1.96
CMC1-202ENST00000396610 VLDLRP98155 873 aa2.78□□□□□ -1.96
CMC1-202ENST00000396610 OTUD4Q01804 1114 aaKnown RBP2.78□□□□□ -1.96
CMC1-202ENST00000396610 EGFEM1PQ0D2K5 195 aa2.78□□□□□ -1.96
CMC1-202ENST00000396610 CAPRIN1Q14444 709 aaKnown RBP2.78□□□□□ -1.96
CMC1-202ENST00000396610 HERPUD1Q15011 391 aa2.78□□□□□ -1.96
CMC1-202ENST00000396610 ADPRMQ3LIE5 342 aa2.78□□□□□ -1.96
CMC1-202ENST00000396610 ZNF530Q6P9A1 599 aaPredicted RBP2.78□□□□□ -1.96
CMC1-202ENST00000396610 KRTAP5-2Q701N4 177 aa2.78□□□□□ -1.96
CMC1-202ENST00000396610 CYS1Q717R9 158 aa2.78□□□□□ -1.96
CMC1-202ENST00000396610 ERI1Q8IV48 349 aaKnown RBP2.78□□□□□ -1.96
CMC1-202ENST00000396610 HDDC3Q8N4P3 179 aa2.78□□□□□ -1.96
CMC1-202ENST00000396610 BBS1Q8NFJ9 593 aa2.78□□□□□ -1.96
CMC1-202ENST00000396610 TRUB1Q8WWH5 349 aaKnown RBP2.78□□□□□ -1.96
CMC1-202ENST00000396610 MARC2Q969Z3 335 aa2.78□□□□□ -1.96
CMC1-202ENST00000396610 C14orf79Q96F83 325 aa2.78□□□□□ -1.96
CMC1-202ENST00000396610 RAB17Q9H0T7 212 aa2.78□□□□□ -1.96
CMC1-202ENST00000396610 POLR3FQ9H1D9 316 aaPredicted RBP2.78□□□□□ -1.96
CMC1-202ENST00000396610 CAB39LQ9H9S4 337 aa2.78□□□□□ -1.96
CMC1-202ENST00000396610 ANKMY1Q9P2S6 941 aa2.78□□□□□ -1.96
CMC1-202ENST00000396610 ONECUT1Q9UBC0 465 aa2.78□□□□□ -1.96
CMC1-202ENST00000396610 XPO7Q9UIA9 1087 aaKnown RBP2.78□□□□□ -1.96
CMC1-202ENST00000396610 GMPPBQ9Y5P6 360 aa2.78□□□□□ -1.96
CMC1-202ENST00000396610 CCDC7Q96M83 1385 aa2.77□□□□□ -1.97
CMC1-202ENST00000396610 A0A0U1RQV5 110 aa2.77□□□□□ -1.97
CMC1-202ENST00000396610 SMIM28A0A1B0GU29 152 aa2.77□□□□□ -1.97
CMC1-202ENST00000396610 FAM74A7A6NL05 159 aa2.77□□□□□ -1.97
CMC1-202ENST00000396610 WASH3PC4AMC7 463 aa2.77□□□□□ -1.97
CMC1-202ENST00000396610 EFNA2O43921 213 aa2.77□□□□□ -1.97
CMC1-202ENST00000396610 TBL1XO60907 577 aa2.77□□□□□ -1.97
CMC1-202ENST00000396610 TRIM3O75382 744 aaPredicted RBP2.77□□□□□ -1.97
CMC1-202ENST00000396610 SEC22BO75396 215 aa2.77□□□□□ -1.97
CMC1-202ENST00000396610 LYPLA1O75608 230 aaPredicted RBP2.77□□□□□ -1.97
CMC1-202ENST00000396610 CABYRO75952 493 aa2.77□□□□□ -1.97
CMC1-202ENST00000396610 H2AFXP16104 143 aaPredicted RBP2.77□□□□□ -1.97
CMC1-202ENST00000396610 FUT3P21217 361 aa2.77□□□□□ -1.97
CMC1-202ENST00000396610 ADORA2BP29275 332 aa2.77□□□□□ -1.97
CMC1-202ENST00000396610 RBMXP38159 391 aaKnown RBP2.77□□□□□ -1.97
CMC1-202ENST00000396610 RPL29P47914 159 aaKnown RBP2.77□□□□□ -1.97
CMC1-202ENST00000396610 CAMLGP49069 296 aa2.77□□□□□ -1.97
CMC1-202ENST00000396610 RIPK4P57078 832 aa2.77□□□□□ -1.97
CMC1-202ENST00000396610 ST3GAL3Q11203 375 aa2.77□□□□□ -1.97
CMC1-202ENST00000396610 SPP2Q13103 211 aa2.77□□□□□ -1.97
CMC1-202ENST00000396610 CEBPEQ15744 281 aa2.77□□□□□ -1.97
CMC1-202ENST00000396610 CHI3L2Q15782 390 aa2.77□□□□□ -1.97
CMC1-202ENST00000396610 FAM74A3Q4VXF1 159 aa2.77□□□□□ -1.97
CMC1-202ENST00000396610 DCST2Q5T1A1 773 aa2.77□□□□□ -1.97
CMC1-202ENST00000396610 OTPQ5XKR4 325 aa2.77□□□□□ -1.97
CMC1-202ENST00000396610 OR8G2PQ6IF36 304 aa2.77□□□□□ -1.97
CMC1-202ENST00000396610 SCYL2Q6P3W7 929 aa2.77□□□□□ -1.97
CMC1-202ENST00000396610 WASH2PQ6VEQ5 465 aa2.77□□□□□ -1.97
CMC1-202ENST00000396610 ERASQ7Z444 233 aa2.77□□□□□ -1.97
CMC1-202ENST00000396610 ZSCAN4Q8NAM6 433 aaPredicted RBP2.77□□□□□ -1.97
CMC1-202ENST00000396610 ZBTB44Q8NCP5 570 aa2.77□□□□□ -1.97
CMC1-202ENST00000396610 STKLD1Q8NE28 680 aa2.77□□□□□ -1.97
CMC1-202ENST00000396610 M1APQ8TC57 530 aa2.77□□□□□ -1.97
CMC1-202ENST00000396610 CCDC47Q96A33 483 aaKnown RBP2.77□□□□□ -1.97
CMC1-202ENST00000396610 MRPL38Q96DV4 380 aaKnown RBP2.77□□□□□ -1.97
CMC1-202ENST00000396610 VSTM2LQ96N03 204 aa2.77□□□□□ -1.97
CMC1-202ENST00000396610 FAM111AQ96PZ2 611 aa2.77□□□□□ -1.97
CMC1-202ENST00000396610 TBCDQ9BTW9 1192 aa2.77□□□□□ -1.97
CMC1-202ENST00000396610 COG4Q9H9E3 785 aa2.77□□□□□ -1.97
CMC1-202ENST00000396610 LPAR2Q9HBW0 351 aa2.77□□□□□ -1.97
CMC1-202ENST00000396610 OR1A1Q9P1Q5 309 aa2.77□□□□□ -1.97
CMC1-202ENST00000396610 ATP6V1HQ9UI12 483 aa2.77□□□□□ -1.97
CMC1-202ENST00000396610 CYTH4Q9UIA0 394 aa2.77□□□□□ -1.97
CMC1-202ENST00000396610 SAMD4AQ9UPU9 718 aaKnown RBP2.77□□□□□ -1.97
CMC1-202ENST00000396610 PIN4Q9Y237 131 aaKnown RBP2.77□□□□□ -1.97
CMC1-202ENST00000396610 ANKRD30BQ9BXX2 1392 aa2.76□□□□□ -1.97
CMC1-202ENST00000396610 KRT87PA6NCN2 255 aa2.76□□□□□ -1.97
CMC1-202ENST00000396610 ANKRD30BLA7E2S9 258 aa2.76□□□□□ -1.97
CMC1-202ENST00000396610 LANCL1O43813 399 aa2.76□□□□□ -1.97
CMC1-202ENST00000396610 TOM1L1O75674 476 aa2.76□□□□□ -1.97
CMC1-202ENST00000396610 PTBP3O95758 552 aaKnown RBP2.76□□□□□ -1.97
CMC1-202ENST00000396610 SEMG1P04279 462 aa2.76□□□□□ -1.97
CMC1-202ENST00000396610 OR8U8P0C7N1 319 aa2.76□□□□□ -1.97
CMC1-202ENST00000396610 DHPSP49366 369 aaPredicted RBP2.76□□□□□ -1.97
CMC1-202ENST00000396610 ZNF133P52736 654 aaPredicted RBP2.76□□□□□ -1.97
CMC1-202ENST00000396610 OSTNP61366 133 aa2.76□□□□□ -1.97
CMC1-202ENST00000396610 ZNF45Q02386 682 aa2.76□□□□□ -1.97
CMC1-202ENST00000396610 ELAVL3Q14576 367 aaKnown RBP2.76□□□□□ -1.97
CMC1-202ENST00000396610 IL17AQ16552 155 aa2.76□□□□□ -1.97
CMC1-202ENST00000396610 RAET1GQ6H3X3 334 aa2.76□□□□□ -1.97
CMC1-202ENST00000396610 ZCCHC12Q6PEW1 402 aa2.76□□□□□ -1.97
CMC1-202ENST00000396610 RBM43Q6ZSC3 357 aaKnown RBP2.76□□□□□ -1.97
CMC1-202ENST00000396610 LANCL3Q6ZV70 420 aa2.76□□□□□ -1.97
CMC1-202ENST00000396610 ZNF589Q86UQ0 364 aaPredicted RBP2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms