RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 PDK3Q15120 406 aa4.01□□□□□ -1.77
HMGB1P10-201ENST00000395823 C10orf120Q5SQS8 335 aa4.01□□□□□ -1.77
HMGB1P10-201ENST00000395823 REP15Q6BDI9 236 aa4.01□□□□□ -1.77
HMGB1P10-201ENST00000395823 ARMCX5Q6P1M9 558 aa4.01□□□□□ -1.77
HMGB1P10-201ENST00000395823 CATSPER3Q86XQ3 398 aa4.01□□□□□ -1.77
HMGB1P10-201ENST00000395823 MYOCDQ8IZQ8 938 aa4.01□□□□□ -1.77
HMGB1P10-201ENST00000395823 TMEM123Q8N131 208 aa4.01□□□□□ -1.77
HMGB1P10-201ENST00000395823 Q8N377 158 aa4.01□□□□□ -1.77
HMGB1P10-201ENST00000395823 C4orf32Q8N8J7 132 aa4.01□□□□□ -1.77
HMGB1P10-201ENST00000395823 PIWIL1Q96J94 861 aaKnown RBP4.01□□□□□ -1.77
HMGB1P10-201ENST00000395823 RIT2Q99578 217 aa4.01□□□□□ -1.77
HMGB1P10-201ENST00000395823 LZTS2Q9BRK4 669 aa4.01□□□□□ -1.77
HMGB1P10-201ENST00000395823 FEM1AQ9BSK4 669 aa4.01□□□□□ -1.77
HMGB1P10-201ENST00000395823 MCRIP2Q9BUT9 160 aaKnown RBP4.01□□□□□ -1.77
HMGB1P10-201ENST00000395823 APMAPQ9HDC9 416 aa4.01□□□□□ -1.77
HMGB1P10-201ENST00000395823 ABCC13Q9NSE7 274 aa4.01□□□□□ -1.77
HMGB1P10-201ENST00000395823 MRPL39Q9NYK5 338 aaKnown RBP4.01□□□□□ -1.77
HMGB1P10-201ENST00000395823 MUTYHQ9UIF7 546 aa4.01□□□□□ -1.77
HMGB1P10-201ENST00000395823 PTBP2Q9UKA9 531 aaKnown RBP4.01□□□□□ -1.77
HMGB1P10-201ENST00000395823 RNF24Q9Y225 148 aa4.01□□□□□ -1.77
HMGB1P10-201ENST00000395823 USP16Q9Y5T5 823 aa4.01□□□□□ -1.77
HMGB1P10-201ENST00000395823 KIF26BQ2KJY2 2108 aa4□□□□□ -1.77
HMGB1P10-201ENST00000395823 CTAGE15A4D2H0 777 aa4□□□□□ -1.77
HMGB1P10-201ENST00000395823 LRRIQ4A6NIV6 560 aa4□□□□□ -1.77
HMGB1P10-201ENST00000395823 LINC01565O15544 149 aa4□□□□□ -1.77
HMGB1P10-201ENST00000395823 MELTFP08582 738 aa4□□□□□ -1.77
HMGB1P10-201ENST00000395823 HSD17B1P14061 328 aa4□□□□□ -1.77
HMGB1P10-201ENST00000395823 H2AFXP16104 143 aaPredicted RBP4□□□□□ -1.77
HMGB1P10-201ENST00000395823 LAP3P28838 519 aa4□□□□□ -1.77
HMGB1P10-201ENST00000395823 HPCAL1P37235 193 aa4□□□□□ -1.77
HMGB1P10-201ENST00000395823 EPS15P42566 896 aa4□□□□□ -1.77
HMGB1P10-201ENST00000395823 EMDP50402 254 aa4□□□□□ -1.77
HMGB1P10-201ENST00000395823 ARHGDIAP52565 204 aa4□□□□□ -1.77
HMGB1P10-201ENST00000395823 AIF1P55008 147 aa4□□□□□ -1.77
HMGB1P10-201ENST00000395823 RPL8P62917 257 aaKnown RBP4□□□□□ -1.77
HMGB1P10-201ENST00000395823 DPYSL3Q14195 570 aa4□□□□□ -1.77
HMGB1P10-201ENST00000395823 MXD4Q14582 209 aaPredicted RBP4□□□□□ -1.77
HMGB1P10-201ENST00000395823 TMEM44Q2T9K0 475 aa4□□□□□ -1.77
HMGB1P10-201ENST00000395823 KLHL22Q53GT1 634 aa4□□□□□ -1.77
HMGB1P10-201ENST00000395823 VWA2Q5GFL6 755 aa4□□□□□ -1.77
HMGB1P10-201ENST00000395823 SEL1L3Q68CR1 1132 aa4□□□□□ -1.77
HMGB1P10-201ENST00000395823 ACSM5Q6NUN0 579 aa4□□□□□ -1.77
HMGB1P10-201ENST00000395823 SYT10Q6XYQ8 523 aa4□□□□□ -1.77
HMGB1P10-201ENST00000395823 CEACAM19Q7Z692 300 aa4□□□□□ -1.77
HMGB1P10-201ENST00000395823 MTERF4Q7Z6M4 381 aaKnown RBP4□□□□□ -1.77
HMGB1P10-201ENST00000395823 CTAGE6Q86UF2 777 aa4□□□□□ -1.77
HMGB1P10-201ENST00000395823 VSTM4Q8IW00 320 aa4□□□□□ -1.77
HMGB1P10-201ENST00000395823 RFESDQ8TAC1 157 aa4□□□□□ -1.77
HMGB1P10-201ENST00000395823 ZNF671Q8TAW3 534 aa4□□□□□ -1.77
HMGB1P10-201ENST00000395823 CNIH3Q8TBE1 160 aa4□□□□□ -1.77
HMGB1P10-201ENST00000395823 TRMT10AQ8TBZ6 339 aaKnown RBP4□□□□□ -1.77
HMGB1P10-201ENST00000395823 SUN5Q8TC36 379 aa4□□□□□ -1.77
HMGB1P10-201ENST00000395823 RNF139Q8WU17 664 aa4□□□□□ -1.77
HMGB1P10-201ENST00000395823 C17orf50Q8WW18 174 aa4□□□□□ -1.77
HMGB1P10-201ENST00000395823 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4□□□□□ -1.77
HMGB1P10-201ENST00000395823 PIGCQ92535 297 aa4□□□□□ -1.77
HMGB1P10-201ENST00000395823 MYLPFQ96A32 169 aa4□□□□□ -1.77
HMGB1P10-201ENST00000395823 PELI1Q96FA3 418 aa4□□□□□ -1.77
HMGB1P10-201ENST00000395823 CNOT6LQ96LI5 555 aaKnown RBP4□□□□□ -1.77
HMGB1P10-201ENST00000395823 ZNF396Q96N95 335 aaPredicted RBP4□□□□□ -1.77
HMGB1P10-201ENST00000395823 RBM14Q96PK6 669 aaKnown RBP4□□□□□ -1.77
HMGB1P10-201ENST00000395823 ZBTB18Q99592 522 aa4□□□□□ -1.77
HMGB1P10-201ENST00000395823 CCT7Q99832 543 aa4□□□□□ -1.77
HMGB1P10-201ENST00000395823 IKZF5Q9H5V7 419 aa4□□□□□ -1.77
HMGB1P10-201ENST00000395823 TM9SF3Q9HD45 589 aa4□□□□□ -1.77
HMGB1P10-201ENST00000395823 AMBNQ9NP70 447 aa4□□□□□ -1.77
HMGB1P10-201ENST00000395823 PIPOXQ9P0Z9 390 aa4□□□□□ -1.77
HMGB1P10-201ENST00000395823 NOSIPQ9Y314 301 aaKnown RBP4□□□□□ -1.77
HMGB1P10-201ENST00000395823 NAALAD2Q9Y3Q0 740 aa4□□□□□ -1.77
HMGB1P10-201ENST00000395823 WDR45Q9Y484 360 aa4□□□□□ -1.77
HMGB1P10-201ENST00000395823 GMPPBQ9Y5P6 360 aa4□□□□□ -1.77
HMGB1P10-201ENST00000395823 SPACA6W5XKT8 324 aa4□□□□□ -1.77
HMGB1P10-201ENST00000395823 TMEM94Q12767 1356 aa4□□□□□ -1.77
HMGB1P10-201ENST00000395823 TTC21BQ7Z4L5 1316 aa3.99□□□□□ -1.77
HMGB1P10-201ENST00000395823 TRABD2BA6NFA1 517 aa3.99□□□□□ -1.77
HMGB1P10-201ENST00000395823 PRR23D1E9PI22 279 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P10-201ENST00000395823 KIF2AO00139 706 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P10-201ENST00000395823 SPOPO43791 374 aa3.99□□□□□ -1.77
HMGB1P10-201ENST00000395823 SRPX2O60687 465 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P10-201ENST00000395823 YEATS4O95619 227 aa3.99□□□□□ -1.77
HMGB1P10-201ENST00000395823 RENP00797 406 aa3.99□□□□□ -1.77
HMGB1P10-201ENST00000395823 CA1P00915 261 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P10-201ENST00000395823 TPM3P06753 285 aa3.99□□□□□ -1.77
HMGB1P10-201ENST00000395823 TPM1P09493 284 aa3.99□□□□□ -1.77
HMGB1P10-201ENST00000395823 PRR23D2P0DMB1 279 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P10-201ENST00000395823 BCKDHAP12694 445 aa3.99□□□□□ -1.77
HMGB1P10-201ENST00000395823 PVRP15151 417 aa3.99□□□□□ -1.77
HMGB1P10-201ENST00000395823 SDC1P18827 310 aa3.99□□□□□ -1.77
HMGB1P10-201ENST00000395823 CALB2P22676 271 aa3.99□□□□□ -1.77
HMGB1P10-201ENST00000395823 OR1D4P47884 311 aa3.99□□□□□ -1.77
HMGB1P10-201ENST00000395823 ETV1P50549 477 aa3.99□□□□□ -1.77
HMGB1P10-201ENST00000395823 LIM2P55344 173 aa3.99□□□□□ -1.77
HMGB1P10-201ENST00000395823 NTHL1P78549 312 aa3.99□□□□□ -1.77
HMGB1P10-201ENST00000395823 PAX8Q06710 450 aa3.99□□□□□ -1.77
HMGB1P10-201ENST00000395823 CCDC173Q0VFZ6 552 aa3.99□□□□□ -1.77
HMGB1P10-201ENST00000395823 PEX6Q13608 980 aa3.99□□□□□ -1.77
HMGB1P10-201ENST00000395823 CUL2Q13617 745 aa3.99□□□□□ -1.77
HMGB1P10-201ENST00000395823 TIGITQ495A1 244 aa3.99□□□□□ -1.77
HMGB1P10-201ENST00000395823 ZNF506Q5JVG8 444 aa3.99□□□□□ -1.77
HMGB1P10-201ENST00000395823 ZNF57Q68EA5 555 aaPredicted RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms