RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 KIAA1324Q6UXG2 1013 aaKnown RBP13.37□□□□□ -0.27
CLIP2-203ENST00000395060 CXXC5Q7LFL8 322 aaKnown RBP13.37□□□□□ -0.27
CLIP2-203ENST00000395060 MS4A15Q8N5U1 240 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 COQ8AQ8NI60 647 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 TTC9Q92623 222 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 LINC00052Q96N35 136 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 BTBD1Q9H0C5 482 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 NEUROD4Q9HD90 331 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 M0R233 179 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 CHST10O43529 356 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 SLC19A2O60779 497 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 GKN3PP0CG01 181 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 PCSK2P16519 638 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 PYCR1P32322 319 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 CLCNKAP51800 687 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 CLDN12P56749 244 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 OR12D2P58182 307 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 SIM1P81133 766 aaPredicted RBP13.37□□□□□ -0.27
CLIP2-203ENST00000395060 ZNF485Q8NCK3 441 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 PIGXQ8TBF5 258 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 SEC22CQ9BRL7 303 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 TRAF4Q9BUZ4 470 aaPredicted RBP13.37□□□□□ -0.27
CLIP2-203ENST00000395060 SGPP1Q9BX95 441 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 ZCCHC2Q9C0B9 1178 aaKnown RBP13.37□□□□□ -0.27
CLIP2-203ENST00000395060 LHX9Q9NQ69 397 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 CYSLTR2Q9NS75 346 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 NUP50Q9UKX7 468 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 CBLCQ9ULV8 474 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 AK6Q9Y3D8 172 aaKnown RBP13.37□□□□□ -0.27
CLIP2-203ENST00000395060 NPIPA5A0A0B4J1W7 369 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 NPIPA7E9PJI5 369 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 SMAD9O15198 467 aaKnown RBP13.37□□□□□ -0.27
CLIP2-203ENST00000395060 SURF4O15260 269 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 CCL16O15467 120 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 SERPINI2O75830 405 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 ADRB1P08588 477 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 H2AFB2P0C5Z0 115 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 NPIPA8P0DM63 369 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 EFNB1P98172 346 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 MFSD13AQ14CX5 517 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 AGERQ15109 404 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 LY6G5CQ5SRR4 150 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 SFRP5Q5T4F7 317 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 CCNJQ5T5M9 372 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 C18orf63Q68DL7 685 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 ALKAL2Q6UX46 152 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 RTL4Q6ZR62 310 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 ZNF547Q8IVP9 402 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 ARL14Q8N4G2 192 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 RFLNBQ8N5W9 214 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 FGF11Q92914 225 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 RFKQ969G6 155 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 ZNF689Q96CS4 500 aaPredicted RBP13.37□□□□□ -0.27
CLIP2-203ENST00000395060 ZNF558Q96NG5 402 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 ACAD8Q9UKU7 415 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 BACE2Q9Y5Z0 518 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 HCFC2Q9Y5Z7 792 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 WNT6Q9Y6F9 365 aa13.37□□□□□ -0.27
CLIP2-203ENST00000395060 FGBP02675 491 aa13.36□□□□□ -0.27
CLIP2-203ENST00000395060 MC3RP41968 323 aa13.36□□□□□ -0.27
CLIP2-203ENST00000395060 VEGFCP49767 419 aa13.36□□□□□ -0.27
CLIP2-203ENST00000395060 KIAA1024LP59773 190 aa13.36□□□□□ -0.27
CLIP2-203ENST00000395060 PUDPQ08623 228 aa13.36□□□□□ -0.27
CLIP2-203ENST00000395060 ENTPD8Q5MY95 495 aa13.36□□□□□ -0.27
CLIP2-203ENST00000395060 ZDHHC20Q5W0Z9 365 aa13.36□□□□□ -0.27
CLIP2-203ENST00000395060 CFAP77Q6ZQR2 320 aa13.36□□□□□ -0.27
CLIP2-203ENST00000395060 Q6ZTK2 550 aa13.36□□□□□ -0.27
CLIP2-203ENST00000395060 LRRC28Q86X40 367 aaPredicted RBP13.36□□□□□ -0.27
CLIP2-203ENST00000395060 PLA2G15Q8NCC3 412 aa13.36□□□□□ -0.27
CLIP2-203ENST00000395060 OR5W2Q8NH69 310 aa13.36□□□□□ -0.27
CLIP2-203ENST00000395060 ZNF671Q8TAW3 534 aa13.36□□□□□ -0.27
CLIP2-203ENST00000395060 THAP4Q8WY91 577 aa13.36□□□□□ -0.27
CLIP2-203ENST00000395060 NXPE2Q96DL1 559 aa13.36□□□□□ -0.27
CLIP2-203ENST00000395060 TCEAL4Q96EI5 215 aa13.36□□□□□ -0.27
CLIP2-203ENST00000395060 AMDHD1Q96NU7 426 aa13.36□□□□□ -0.27
CLIP2-203ENST00000395060 C11orf49Q9H6J7 331 aa13.36□□□□□ -0.27
CLIP2-203ENST00000395060 RWDD3Q9Y3V2 267 aa13.36□□□□□ -0.27
CLIP2-203ENST00000395060 RPS10-NUDT3A0A1W2PQS6 291 aa13.36□□□□□ -0.27
CLIP2-203ENST00000395060 TCRBV16S1A1N1A0A5B0 115 aa13.36□□□□□ -0.27
CLIP2-203ENST00000395060 LINC00862A6NCI5 91 aa13.36□□□□□ -0.27
CLIP2-203ENST00000395060 GNB5O14775 395 aa13.36□□□□□ -0.27
CLIP2-203ENST00000395060 PI15O43692 258 aa13.36□□□□□ -0.27
CLIP2-203ENST00000395060 GMDSO60547 372 aa13.36□□□□□ -0.27
CLIP2-203ENST00000395060 IFNA7P01567 189 aa13.36□□□□□ -0.27
CLIP2-203ENST00000395060 M6PRP20645 277 aa13.36□□□□□ -0.27
CLIP2-203ENST00000395060 SNTB2Q13425 540 aaKnown RBP13.36□□□□□ -0.27
CLIP2-203ENST00000395060 FZD5Q13467 585 aa13.36□□□□□ -0.27
CLIP2-203ENST00000395060 CAMK2DQ13557 499 aa13.36□□□□□ -0.27
CLIP2-203ENST00000395060 SLC36A2Q495M3 483 aa13.36□□□□□ -0.27
CLIP2-203ENST00000395060 ARHGAP15Q53QZ3 475 aa13.36□□□□□ -0.27
CLIP2-203ENST00000395060 AADACL4Q5VUY2 407 aa13.36□□□□□ -0.27
CLIP2-203ENST00000395060 HBMQ6B0K9 141 aa13.36□□□□□ -0.27
CLIP2-203ENST00000395060 SLC25A25Q6KCM7 469 aa13.36□□□□□ -0.27
CLIP2-203ENST00000395060 PARS2Q7L3T8 475 aaKnown RBP13.36□□□□□ -0.27
CLIP2-203ENST00000395060 LINGO2Q7L985 606 aa13.36□□□□□ -0.27
CLIP2-203ENST00000395060 ACBD7Q8N6N7 88 aa13.36□□□□□ -0.27
CLIP2-203ENST00000395060 OR51A7Q8NH64 312 aa13.36□□□□□ -0.27
CLIP2-203ENST00000395060 GNPDA2Q8TDQ7 276 aa13.36□□□□□ -0.27
CLIP2-203ENST00000395060 TFGQ92734 400 aaPredicted RBP13.36□□□□□ -0.27
CLIP2-203ENST00000395060 SCMH1Q96GD3 660 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms