RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 HMGN2P05204 90 aaKnown RBP7.97□□□□□ -1.13
ATG4A-205ENST00000394892 NGFRP08138 427 aa7.97□□□□□ -1.13
ATG4A-205ENST00000394892 NPIPA8P0DM63 369 aa7.97□□□□□ -1.13
ATG4A-205ENST00000394892 G6PDP11413 515 aa7.97□□□□□ -1.13
ATG4A-205ENST00000394892 NID1P14543 1247 aa7.97□□□□□ -1.13
ATG4A-205ENST00000394892 TBXA2RP21731 343 aa7.97□□□□□ -1.13
ATG4A-205ENST00000394892 SHC1P29353 583 aa7.97□□□□□ -1.13
ATG4A-205ENST00000394892 CCKARP32238 428 aa7.97□□□□□ -1.13
ATG4A-205ENST00000394892 KRT20P35900 424 aa7.97□□□□□ -1.13
ATG4A-205ENST00000394892 IFFO1Q0D2I5 559 aa7.97□□□□□ -1.13
ATG4A-205ENST00000394892 RCAN2Q14206 197 aa7.97□□□□□ -1.13
ATG4A-205ENST00000394892 LASP1Q14847 261 aaKnown RBP7.97□□□□□ -1.13
ATG4A-205ENST00000394892 MLC1Q15049 377 aa7.97□□□□□ -1.13
ATG4A-205ENST00000394892 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.97□□□□□ -1.13
ATG4A-205ENST00000394892 CTU2Q2VPK5 515 aaKnown RBP7.97□□□□□ -1.13
ATG4A-205ENST00000394892 FLYWCH1Q4VC44 716 aa7.97□□□□□ -1.13
ATG4A-205ENST00000394892 ENPP6Q6UWR7 440 aa7.97□□□□□ -1.13
ATG4A-205ENST00000394892 LUZP2Q86TE4 346 aa7.97□□□□□ -1.13
ATG4A-205ENST00000394892 CDC20BQ86Y33 519 aa7.97□□□□□ -1.13
ATG4A-205ENST00000394892 UBQLNLQ8IYU4 475 aa7.97□□□□□ -1.13
ATG4A-205ENST00000394892 CLEC4FQ8N1N0 589 aa7.97□□□□□ -1.13
ATG4A-205ENST00000394892 ZNF781Q8N8C0 355 aa7.97□□□□□ -1.13
ATG4A-205ENST00000394892 CDRT4Q8N9R6 151 aa7.97□□□□□ -1.13
ATG4A-205ENST00000394892 FAM222BQ8WU58 562 aa7.97□□□□□ -1.13
ATG4A-205ENST00000394892 MTERF3Q96E29 417 aa7.97□□□□□ -1.13
ATG4A-205ENST00000394892 ARSGQ96EG1 525 aa7.97□□□□□ -1.13
ATG4A-205ENST00000394892 ZBED6CLQ96FA7 236 aaPredicted RBP7.97□□□□□ -1.13
ATG4A-205ENST00000394892 PPP3R2Q96LZ3 170 aa7.97□□□□□ -1.13
ATG4A-205ENST00000394892 MS4A4EQ96PG1 132 aa7.97□□□□□ -1.13
ATG4A-205ENST00000394892 ALPK1Q96QP1 1244 aa7.97□□□□□ -1.13
ATG4A-205ENST00000394892 SFXN3Q9BWM7 321 aa7.97□□□□□ -1.13
ATG4A-205ENST00000394892 AKTIPQ9H8T0 292 aa7.97□□□□□ -1.13
ATG4A-205ENST00000394892 GALNT8Q9NY28 637 aa7.97□□□□□ -1.13
ATG4A-205ENST00000394892 KCNE5Q9UJ90 142 aa7.97□□□□□ -1.13
ATG4A-205ENST00000394892 ABCA2Q9BZC7 2435 aa7.97□□□□□ -1.13
ATG4A-205ENST00000394892 FREM3P0C091 2139 aa7.96□□□□□ -1.13
ATG4A-205ENST00000394892 CENPVL1A0A0U1RR11 272 aa7.96□□□□□ -1.14
ATG4A-205ENST00000394892 A0A1W2PRB8 838 aa7.96□□□□□ -1.14
ATG4A-205ENST00000394892 TTC36A6NLP5 189 aa7.96□□□□□ -1.14
ATG4A-205ENST00000394892 SEC14L5O43304 696 aa7.96□□□□□ -1.14
ATG4A-205ENST00000394892 CHEK2O96017 543 aa7.96□□□□□ -1.14
ATG4A-205ENST00000394892 EPXP11678 715 aa7.96□□□□□ -1.14
ATG4A-205ENST00000394892 BGNP21810 368 aa7.96□□□□□ -1.14
ATG4A-205ENST00000394892 GPC1P35052 558 aa7.96□□□□□ -1.14
ATG4A-205ENST00000394892 SERPINB5P36952 375 aa7.96□□□□□ -1.14
ATG4A-205ENST00000394892 ASMTP46597 345 aa7.96□□□□□ -1.14
ATG4A-205ENST00000394892 PRIM2P49643 509 aa7.96□□□□□ -1.14
ATG4A-205ENST00000394892 WDR4P57081 412 aaKnown RBP7.96□□□□□ -1.14
ATG4A-205ENST00000394892 C21orf58P58505 322 aa7.96□□□□□ -1.14
ATG4A-205ENST00000394892 HBA1P69905 142 aa7.96□□□□□ -1.14
ATG4A-205ENST00000394892 FAM27E3Q08E93 113 aa7.96□□□□□ -1.14
ATG4A-205ENST00000394892 FOXD4Q12950 439 aaPredicted RBP7.96□□□□□ -1.14
ATG4A-205ENST00000394892 ZNHIT3Q15649 155 aaPredicted RBP7.96□□□□□ -1.14
ATG4A-205ENST00000394892 CHI3L2Q15782 390 aa7.96□□□□□ -1.14
ATG4A-205ENST00000394892 TOMM34Q15785 309 aaPredicted RBP7.96□□□□□ -1.14
ATG4A-205ENST00000394892 NDUFAF6Q330K2 333 aa7.96□□□□□ -1.14
ATG4A-205ENST00000394892 KRT71Q3SY84 523 aa7.96□□□□□ -1.14
ATG4A-205ENST00000394892 GLYR1Q49A26 553 aaPredicted RBP7.96□□□□□ -1.14
ATG4A-205ENST00000394892 RAET1LQ5VY80 246 aa7.96□□□□□ -1.14
ATG4A-205ENST00000394892 AAGABQ6PD74 315 aa7.96□□□□□ -1.14
ATG4A-205ENST00000394892 CBLN3Q6UW01 205 aa7.96□□□□□ -1.14
ATG4A-205ENST00000394892 BIVMQ86UB2 503 aa7.96□□□□□ -1.14
ATG4A-205ENST00000394892 NUDCD3Q8IVD9 361 aa7.96□□□□□ -1.14
ATG4A-205ENST00000394892 CLECL1Q8IZS7 167 aa7.96□□□□□ -1.14
ATG4A-205ENST00000394892 METTL25Q8N6Q8 603 aa7.96□□□□□ -1.14
ATG4A-205ENST00000394892 CEP70Q8NHQ1 597 aa7.96□□□□□ -1.14
ATG4A-205ENST00000394892 FNDC9Q8TBE3 224 aa7.96□□□□□ -1.14
ATG4A-205ENST00000394892 OR5P2Q8WZ92 322 aa7.96□□□□□ -1.14
ATG4A-205ENST00000394892 CDS1Q92903 461 aa7.96□□□□□ -1.14
ATG4A-205ENST00000394892 PPP1R36Q96LQ0 422 aa7.96□□□□□ -1.14
ATG4A-205ENST00000394892 ZIM3Q96PE6 472 aa7.96□□□□□ -1.14
ATG4A-205ENST00000394892 TM9SF2Q99805 663 aa7.96□□□□□ -1.14
ATG4A-205ENST00000394892 RBM24Q9BX46 236 aaKnown RBP7.96□□□□□ -1.14
ATG4A-205ENST00000394892 IQCGQ9H095 443 aaKnown RBP7.96□□□□□ -1.14
ATG4A-205ENST00000394892 OPN3Q9H1Y3 402 aaPredicted RBP7.96□□□□□ -1.14
ATG4A-205ENST00000394892 PLEKHF2Q9H8W4 249 aa7.96□□□□□ -1.14
ATG4A-205ENST00000394892 EML4Q9HC35 981 aaKnown RBP7.96□□□□□ -1.14
ATG4A-205ENST00000394892 MED17Q9NVC6 651 aa7.96□□□□□ -1.14
ATG4A-205ENST00000394892 PNPOQ9NVS9 261 aa7.96□□□□□ -1.14
ATG4A-205ENST00000394892 GIN1Q9NXP7 522 aa7.96□□□□□ -1.14
ATG4A-205ENST00000394892 HAO1Q9UJM8 370 aa7.96□□□□□ -1.14
ATG4A-205ENST00000394892 VDAC3Q9Y277 283 aa7.96□□□□□ -1.14
ATG4A-205ENST00000394892 PLEKHA6Q9Y2H5 1048 aa7.96□□□□□ -1.14
ATG4A-205ENST00000394892 A0A0J9YW62 118 aa7.95□□□□□ -1.14
ATG4A-205ENST00000394892 PRAMEF27A3QJZ7 478 aa7.95□□□□□ -1.14
ATG4A-205ENST00000394892 TUBAL3A6NHL2 446 aa7.95□□□□□ -1.14
ATG4A-205ENST00000394892 SLC22A20A6NK97 555 aa7.95□□□□□ -1.14
ATG4A-205ENST00000394892 FAM171A2A8MVW0 826 aa7.95□□□□□ -1.14
ATG4A-205ENST00000394892 ESPNB1AK53 854 aa7.95□□□□□ -1.14
ATG4A-205ENST00000394892 H3BML4 177 aa7.95□□□□□ -1.14
ATG4A-205ENST00000394892 CTIFO43310 598 aaKnown RBP7.95□□□□□ -1.14
ATG4A-205ENST00000394892 BCAS1O75363 584 aaPredicted RBP7.95□□□□□ -1.14
ATG4A-205ENST00000394892 TNFRSF21O75509 655 aa7.95□□□□□ -1.14
ATG4A-205ENST00000394892 KCNH1O95259 989 aa7.95□□□□□ -1.14
ATG4A-205ENST00000394892 HRGP04196 525 aa7.95□□□□□ -1.14
ATG4A-205ENST00000394892 SERPINE1P05121 402 aa7.95□□□□□ -1.14
ATG4A-205ENST00000394892 ALOX5P09917 674 aa7.95□□□□□ -1.14
ATG4A-205ENST00000394892 LINGO3P0C6S8 592 aa7.95□□□□□ -1.14
ATG4A-205ENST00000394892 PEPDP12955 493 aa7.95□□□□□ -1.14
ATG4A-205ENST00000394892 LOXP28300 417 aaPredicted RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms