RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 PDZK1Q5T2W1 519 aa13.83□□□□□ -0.2
CCT4-201ENST00000394440 SLC38A9Q8NBW4 561 aa13.83□□□□□ -0.2
CCT4-201ENST00000394440 OR6C1Q96RD1 312 aa13.83□□□□□ -0.2
CCT4-201ENST00000394440 TGIF2Q9GZN2 237 aa13.83□□□□□ -0.2
CCT4-201ENST00000394440 VN1R1Q9GZP7 353 aa13.83□□□□□ -0.2
CCT4-201ENST00000394440 SCN3BQ9NY72 215 aa13.83□□□□□ -0.2
CCT4-201ENST00000394440 CTSFQ9UBX1 484 aa13.83□□□□□ -0.2
CCT4-201ENST00000394440 TESQ9UGI8 421 aaKnown RBP13.83□□□□□ -0.2
CCT4-201ENST00000394440 CBLCQ9ULV8 474 aa13.83□□□□□ -0.2
CCT4-201ENST00000394440 DMDP11532 3685 aa13.83□□□□□ -0.2
CCT4-201ENST00000394440 PTGES3LE9PB15 166 aa13.83□□□□□ -0.2
CCT4-201ENST00000394440 NTN3O00634 580 aaPredicted RBP13.83□□□□□ -0.2
CCT4-201ENST00000394440 LYPD3O95274 346 aa13.83□□□□□ -0.2
CCT4-201ENST00000394440 NTN1O95631 604 aa13.83□□□□□ -0.2
CCT4-201ENST00000394440 TTKP33981 857 aa13.83□□□□□ -0.2
CCT4-201ENST00000394440 OMPP47874 163 aa13.83□□□□□ -0.2
CCT4-201ENST00000394440 CDC42P60953 191 aa13.83□□□□□ -0.2
CCT4-201ENST00000394440 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.83□□□□□ -0.2
CCT4-201ENST00000394440 MFSD4BQ5TF39 518 aa13.83□□□□□ -0.2
CCT4-201ENST00000394440 C12orf73Q69YU5 71 aa13.83□□□□□ -0.2
CCT4-201ENST00000394440 GTF2IRD2BQ6EKJ0 949 aa13.83□□□□□ -0.2
CCT4-201ENST00000394440 GTF2IRD2Q86UP8 949 aa13.83□□□□□ -0.2
CCT4-201ENST00000394440 BCORP1Q8N888 145 aa13.83□□□□□ -0.2
CCT4-201ENST00000394440 ZNF721Q8TF20 911 aa13.83□□□□□ -0.2
CCT4-201ENST00000394440 PRSS27Q9BQR3 290 aa13.83□□□□□ -0.2
CCT4-201ENST00000394440 G6PC3Q9BUM1 346 aa13.83□□□□□ -0.2
CCT4-201ENST00000394440 ARMC7Q9H6L4 198 aa13.83□□□□□ -0.2
CCT4-201ENST00000394440 MRPS14O60783 128 aaKnown RBP13.82□□□□□ -0.2
CCT4-201ENST00000394440 GKN3PP0CG01 181 aa13.82□□□□□ -0.2
CCT4-201ENST00000394440 RFX3P48380 749 aa13.82□□□□□ -0.2
CCT4-201ENST00000394440 DAB2P98082 770 aa13.82□□□□□ -0.2
CCT4-201ENST00000394440 FGFBP1Q14512 234 aa13.82□□□□□ -0.2
CCT4-201ENST00000394440 NNATQ16517 81 aa13.82□□□□□ -0.2
CCT4-201ENST00000394440 LPAL2Q16609 132 aa13.82□□□□□ -0.2
CCT4-201ENST00000394440 LAPTM4BQ86VI4 370 aa13.82□□□□□ -0.2
CCT4-201ENST00000394440 HEATR5AQ86XA9 2040 aa13.82□□□□□ -0.2
CCT4-201ENST00000394440 P3H2Q8IVL5 708 aa13.82□□□□□ -0.2
CCT4-201ENST00000394440 PLPP5Q8NEB5 264 aa13.82□□□□□ -0.2
CCT4-201ENST00000394440 OR13F1Q8NGS4 319 aa13.82□□□□□ -0.2
CCT4-201ENST00000394440 SLC2A12Q8TD20 617 aa13.82□□□□□ -0.2
CCT4-201ENST00000394440 SLC46A1Q96NT5 459 aa13.82□□□□□ -0.2
CCT4-201ENST00000394440 PRRX2Q99811 253 aa13.82□□□□□ -0.2
CCT4-201ENST00000394440 CCNB1IP1Q9NPC3 277 aa13.82□□□□□ -0.2
CCT4-201ENST00000394440 TRAPPC13A5PLN9 417 aa13.82□□□□□ -0.2
CCT4-201ENST00000394440 M0R129 80 aa13.82□□□□□ -0.2
CCT4-201ENST00000394440 KLF4O43474 513 aa13.82□□□□□ -0.2
CCT4-201ENST00000394440 FAM20BO75063 409 aa13.82□□□□□ -0.2
CCT4-201ENST00000394440 GSTM3P21266 225 aa13.82□□□□□ -0.2
CCT4-201ENST00000394440 RNF144AP50876 292 aaPredicted RBP13.82□□□□□ -0.2
CCT4-201ENST00000394440 DUSP3P51452 185 aaPredicted RBP13.82□□□□□ -0.2
CCT4-201ENST00000394440 ZNF385CQ66K41 422 aaPredicted RBP13.82□□□□□ -0.2
CCT4-201ENST00000394440 ZNF730Q6ZMV8 503 aa13.82□□□□□ -0.2
CCT4-201ENST00000394440 PRICKLE2Q7Z3G6 844 aa13.82□□□□□ -0.2
CCT4-201ENST00000394440 EGFL6Q8IUX8 553 aa13.82□□□□□ -0.2
CCT4-201ENST00000394440 PRSS33Q8NF86 280 aa13.82□□□□□ -0.2
CCT4-201ENST00000394440 IPCEF1Q8WWN9 437 aaPredicted RBP13.82□□□□□ -0.2
CCT4-201ENST00000394440 CNOT9Q92600 299 aaKnown RBP13.82□□□□□ -0.2
CCT4-201ENST00000394440 SLC35B4Q969S0 331 aa13.82□□□□□ -0.2
CCT4-201ENST00000394440 GTPBP2Q9BX10 602 aaKnown RBP13.82□□□□□ -0.2
CCT4-201ENST00000394440 SMOC1Q9H4F8 434 aa13.82□□□□□ -0.2
CCT4-201ENST00000394440 SYNDIG1Q9H7V2 258 aa13.82□□□□□ -0.2
CCT4-201ENST00000394440 VCX3AQ9NNX9 186 aa13.82□□□□□ -0.2
CCT4-201ENST00000394440 FKBP14Q9NWM8 211 aa13.82□□□□□ -0.2
CCT4-201ENST00000394440 IMPAD1Q9NX62 359 aa13.82□□□□□ -0.2
CCT4-201ENST00000394440 DNAJB12Q9NXW2 375 aaKnown RBP13.82□□□□□ -0.2
CCT4-201ENST00000394440 ERVK-18Q9QC07 812 aa13.82□□□□□ -0.2
CCT4-201ENST00000394440 RARRES3Q9UL19 164 aa13.82□□□□□ -0.2
CCT4-201ENST00000394440 SLC7A7Q9UM01 511 aa13.82□□□□□ -0.2
CCT4-201ENST00000394440 A8MUA0 341 aa13.81□□□□□ -0.2
CCT4-201ENST00000394440 D6RAR5 112 aa13.81□□□□□ -0.2
CCT4-201ENST00000394440 SEC14L2O76054 403 aa13.81□□□□□ -0.2
CCT4-201ENST00000394440 ONECUT2O95948 504 aa13.81□□□□□ -0.2
CCT4-201ENST00000394440 ITIH1P19827 911 aa13.81□□□□□ -0.2
CCT4-201ENST00000394440 POU1F1P28069 291 aa13.81□□□□□ -0.2
CCT4-201ENST00000394440 IFNGR2P38484 337 aa13.81□□□□□ -0.2
CCT4-201ENST00000394440 PPICP45877 212 aa13.81□□□□□ -0.2
CCT4-201ENST00000394440 ATP12AP54707 1039 aa13.81□□□□□ -0.2
CCT4-201ENST00000394440 TSPAN31Q12999 210 aa13.81□□□□□ -0.2
CCT4-201ENST00000394440 ANGPT1Q15389 498 aa13.81□□□□□ -0.2
CCT4-201ENST00000394440 OR1Q1Q15612 314 aa13.81□□□□□ -0.2
CCT4-201ENST00000394440 PWWP2BQ6NUJ5 590 aa13.81□□□□□ -0.2
CCT4-201ENST00000394440 MBOAT2Q6ZWT7 520 aa13.81□□□□□ -0.2
CCT4-201ENST00000394440 POGLUT1Q8NBL1 392 aa13.81□□□□□ -0.2
CCT4-201ENST00000394440 ZNF540Q8NDQ6 660 aa13.81□□□□□ -0.2
CCT4-201ENST00000394440 GNPDA2Q8TDQ7 276 aa13.81□□□□□ -0.2
CCT4-201ENST00000394440 TMEM255BQ8WV15 326 aa13.81□□□□□ -0.2
CCT4-201ENST00000394440 RSL24D1Q9UHA3 163 aaKnown RBP13.81□□□□□ -0.2
CCT4-201ENST00000394440 PSORS1C1Q9UIG5 152 aa13.81□□□□□ -0.2
CCT4-201ENST00000394440 SNX5Q9Y5X3 404 aa13.81□□□□□ -0.2
CCT4-201ENST00000394440 CLCA3PQ9Y6N3 262 aa13.81□□□□□ -0.2
CCT4-201ENST00000394440 DYRK3O43781 588 aa13.81□□□□□ -0.2
CCT4-201ENST00000394440 MPZL2O60487 215 aa13.81□□□□□ -0.2
CCT4-201ENST00000394440 ADAM11O75078 769 aa13.81□□□□□ -0.2
CCT4-201ENST00000394440 GSTT1P30711 240 aa13.81□□□□□ -0.2
CCT4-201ENST00000394440 MPLP40238 635 aa13.81□□□□□ -0.2
CCT4-201ENST00000394440 PSMD4P55036 377 aaKnown RBP13.81□□□□□ -0.2
CCT4-201ENST00000394440 NSDHLQ15738 373 aa13.81□□□□□ -0.2
CCT4-201ENST00000394440 KIF18BQ86Y91 864 aa13.81□□□□□ -0.2
CCT4-201ENST00000394440 OR14A16Q8NHC5 309 aa13.81□□□□□ -0.2
CCT4-201ENST00000394440 MUL1Q969V5 352 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms