RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 ZNF527Q8NB42 609 aa9.33□□□□□ -0.92
PSEN1-204ENST00000394164 OR52N2Q8NGI0 321 aa9.33□□□□□ -0.92
PSEN1-204ENST00000394164 OR52I1Q8NGK6 324 aa9.33□□□□□ -0.92
PSEN1-204ENST00000394164 SLC38A5Q8WUX1 472 aa9.33□□□□□ -0.92
PSEN1-204ENST00000394164 OTULINQ96BN8 352 aa9.33□□□□□ -0.92
PSEN1-204ENST00000394164 OTUB2Q96DC9 234 aa9.33□□□□□ -0.92
PSEN1-204ENST00000394164 PPP1R16AQ96I34 528 aa9.33□□□□□ -0.92
PSEN1-204ENST00000394164 LRIG1Q96JA1 1093 aa9.33□□□□□ -0.92
PSEN1-204ENST00000394164 FCRL4Q96PJ5 515 aa9.33□□□□□ -0.92
PSEN1-204ENST00000394164 RSPO3Q9BXY4 272 aaPredicted RBP9.33□□□□□ -0.92
PSEN1-204ENST00000394164 KLHL31Q9H511 634 aa9.33□□□□□ -0.92
PSEN1-204ENST00000394164 SLC25A19Q9HC21 320 aa9.33□□□□□ -0.92
PSEN1-204ENST00000394164 CA5BQ9Y2D0 317 aa9.33□□□□□ -0.92
PSEN1-204ENST00000394164 PLXNA2O75051 1894 aa9.33□□□□□ -0.92
PSEN1-204ENST00000394164 FAM74A7A6NL05 159 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 NARSO43776 548 aaKnown RBP9.32□□□□□ -0.92
PSEN1-204ENST00000394164 PRKYO43930 277 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 NTN1O95631 604 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 NFATC1O95644 943 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 FGF19O95750 216 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 CD3GP09693 182 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 HOXB6P17509 224 aaKnown RBP9.32□□□□□ -0.92
PSEN1-204ENST00000394164 PTX3P26022 381 aaPredicted RBP9.32□□□□□ -0.92
PSEN1-204ENST00000394164 CDK3Q00526 305 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 ADAM15Q13444 863 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 GPM6BQ13491 265 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 CAMK2DQ13557 499 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 SYPL1Q16563 259 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 ST3GAL2Q16842 350 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 GAB4Q2WGN9 574 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 FAM74A3Q4VXF1 159 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 TMEM107Q6UX40 140 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 HMGB4Q8WW32 186 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 HSD17B8Q92506 261 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 UFD1Q92890 307 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 TMEM19Q96HH6 336 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 SFXN2Q96NB2 322 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 ASB16Q96NS5 453 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 NPAS1Q99742 590 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 REG4Q9BYZ8 158 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 PLA2G2FQ9BZM2 168 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 SHARPINQ9H0F6 387 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 ZCCHC4Q9H5U6 513 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 EMC7Q9NPA0 242 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 LTBP2Q14767 1821 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 B4GALT2O60909 372 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 OR12D1P0DN82 309 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 SPTBP11277 2137 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 SLC6A1P30531 599 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 XKP51811 444 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 LIM2P55344 173 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 PUM1Q14671 1186 aaKnown RBP eCLIP9.32□□□□□ -0.92
PSEN1-204ENST00000394164 HEPACAMQ14CZ8 416 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 ETFDHQ16134 617 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 ZNF658BQ4V348 819 aaPredicted RBP9.32□□□□□ -0.92
PSEN1-204ENST00000394164 KHDRBS2Q5VWX1 349 aaKnown RBP9.32□□□□□ -0.92
PSEN1-204ENST00000394164 LYPD4Q6UWN0 246 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 NLRC3Q7RTR2 1065 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 LRRTM4Q86VH4 590 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 GPR135Q8IZ08 494 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 KRT78Q8N1N4 520 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 LINC01555Q8NAE3 123 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 MOSPD2Q8NHP6 518 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 NEIL3Q8TAT5 605 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 TMEM163Q8TC26 289 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 PTP4A1Q93096 173 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 MAPKAP1Q9BPZ7 522 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 GHITMQ9H3K2 345 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 ZNF768Q9H5H4 540 aaKnown RBP9.32□□□□□ -0.92
PSEN1-204ENST00000394164 FBXW2Q9UKT8 454 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 GSTK1Q9Y2Q3 226 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 FKBP7Q9Y680 259 aa9.32□□□□□ -0.92
PSEN1-204ENST00000394164 NPIPB8E9PQR5 432 aa9.31□□□□□ -0.92
PSEN1-204ENST00000394164 M0R3H8 397 aa9.31□□□□□ -0.92
PSEN1-204ENST00000394164 FRS3O43559 492 aa9.31□□□□□ -0.92
PSEN1-204ENST00000394164 SLC28A2O43868 658 aa9.31□□□□□ -0.92
PSEN1-204ENST00000394164 KAT7O95251 611 aa9.31□□□□□ -0.92
PSEN1-204ENST00000394164 CELP19835 753 aa9.31□□□□□ -0.92
PSEN1-204ENST00000394164 PPIBP23284 216 aaKnown RBP9.31□□□□□ -0.92
PSEN1-204ENST00000394164 PBX2P40425 430 aa9.31□□□□□ -0.92
PSEN1-204ENST00000394164 SSR2P43308 183 aa9.31□□□□□ -0.92
PSEN1-204ENST00000394164 MAZP56270 477 aaKnown RBP9.31□□□□□ -0.92
PSEN1-204ENST00000394164 PIN1Q13526 163 aaPredicted RBP9.31□□□□□ -0.92
PSEN1-204ENST00000394164 SEC23BQ15437 767 aa9.31□□□□□ -0.92
PSEN1-204ENST00000394164 C6orf120Q7Z4R8 191 aa9.31□□□□□ -0.92
PSEN1-204ENST00000394164 FAM129CQ86XR2 697 aa9.31□□□□□ -0.92
PSEN1-204ENST00000394164 ZNF687Q8N1G0 1237 aa9.31□□□□□ -0.92
PSEN1-204ENST00000394164 BOLLQ8N9W6 283 aaKnown RBP9.31□□□□□ -0.92
PSEN1-204ENST00000394164 PROKR2Q8NFJ6 384 aa9.31□□□□□ -0.92
PSEN1-204ENST00000394164 GIMAP1Q8WWP7 306 aa9.31□□□□□ -0.92
PSEN1-204ENST00000394164 SMARCD2Q92925 531 aa9.31□□□□□ -0.92
PSEN1-204ENST00000394164 RFT1Q96AA3 541 aa9.31□□□□□ -0.92
PSEN1-204ENST00000394164 KIAA1143Q96AT1 154 aaPredicted RBP9.31□□□□□ -0.92
PSEN1-204ENST00000394164 TM4SF18Q96CE8 201 aa9.31□□□□□ -0.92
PSEN1-204ENST00000394164 ARSGQ96EG1 525 aa9.31□□□□□ -0.92
PSEN1-204ENST00000394164 WDR89Q96FK6 387 aaPredicted RBP9.31□□□□□ -0.92
PSEN1-204ENST00000394164 ZFP3Q96NJ6 502 aa9.31□□□□□ -0.92
PSEN1-204ENST00000394164 KCNJ15Q99712 375 aa9.31□□□□□ -0.92
PSEN1-204ENST00000394164 PIP5K1AQ99755 562 aa9.31□□□□□ -0.92
PSEN1-204ENST00000394164 CORO2BQ9UQ03 480 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms