RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 FLYWCH1Q4VC44 716 aa12.13□□□□□ -0.47
USP44-202ENST00000393091 C16orf47Q6ZP98 133 aaPredicted RBP12.13□□□□□ -0.47
USP44-202ENST00000393091 RAB8BQ92930 207 aa12.13□□□□□ -0.47
USP44-202ENST00000393091 YIPF4Q9BSR8 244 aa12.13□□□□□ -0.47
USP44-202ENST00000393091 SLC25A18Q9H1K4 315 aa12.13□□□□□ -0.47
USP44-202ENST00000393091 AHCTF1Q8WYP5 2266 aa12.13□□□□□ -0.47
USP44-202ENST00000393091 SERINC4A6NH21 518 aa12.13□□□□□ -0.47
USP44-202ENST00000393091 LRRC3CA6NJW4 275 aa12.13□□□□□ -0.47
USP44-202ENST00000393091 A8MUI8 341 aa12.13□□□□□ -0.47
USP44-202ENST00000393091 SLC25A12O75746 678 aa12.13□□□□□ -0.47
USP44-202ENST00000393091 HPNP05981 417 aa12.13□□□□□ -0.47
USP44-202ENST00000393091 BCHEP06276 602 aa12.13□□□□□ -0.47
USP44-202ENST00000393091 CCL3P10147 92 aa12.13□□□□□ -0.47
USP44-202ENST00000393091 NR2F1P10589 423 aa12.13□□□□□ -0.47
USP44-202ENST00000393091 ATP6V1C1P21283 382 aa12.13□□□□□ -0.47
USP44-202ENST00000393091 KCNJ5P48544 419 aa12.13□□□□□ -0.47
USP44-202ENST00000393091 SKP2Q13309 424 aa12.13□□□□□ -0.47
USP44-202ENST00000393091 ZNF766Q5HY98 468 aa12.13□□□□□ -0.47
USP44-202ENST00000393091 NHSL2Q5HYW2 709 aa12.13□□□□□ -0.47
USP44-202ENST00000393091 FCRLBQ6BAA4 426 aa12.13□□□□□ -0.47
USP44-202ENST00000393091 CBLL1Q75N03 491 aa12.13□□□□□ -0.47
USP44-202ENST00000393091 WDR53Q7Z5U6 358 aaPredicted RBP12.13□□□□□ -0.47
USP44-202ENST00000393091 KRT73Q86Y46 540 aa12.13□□□□□ -0.47
USP44-202ENST00000393091 OR2M7Q8NG81 312 aa12.13□□□□□ -0.47
USP44-202ENST00000393091 NFKBIDQ8NI38 313 aa12.13□□□□□ -0.47
USP44-202ENST00000393091 OR2B2Q9GZK3 357 aa12.13□□□□□ -0.47
USP44-202ENST00000393091 ZDHHC11Q9H8X9 412 aa12.13□□□□□ -0.47
USP44-202ENST00000393091 C12orf10Q9HB07 376 aa12.13□□□□□ -0.47
USP44-202ENST00000393091 ZNF443Q9Y2A4 671 aaPredicted RBP12.13□□□□□ -0.47
USP44-202ENST00000393091 B3GNT3Q9Y2A9 372 aa12.13□□□□□ -0.47
USP44-202ENST00000393091 C15orf41Q9Y2V0 281 aa12.13□□□□□ -0.47
USP44-202ENST00000393091 CDHR4A6H8M9 788 aa12.12□□□□□ -0.47
USP44-202ENST00000393091 KLRC4-KLRK1H3BQV0 150 aa12.12□□□□□ -0.47
USP44-202ENST00000393091 IFNA14P01570 189 aa12.12□□□□□ -0.47
USP44-202ENST00000393091 NRF1Q16656 503 aa12.12□□□□□ -0.47
USP44-202ENST00000393091 CYP51A1Q16850 503 aa12.12□□□□□ -0.47
USP44-202ENST00000393091 EIPR1Q53HC9 387 aa12.12□□□□□ -0.47
USP44-202ENST00000393091 APOOLQ6UXV4 268 aa12.12□□□□□ -0.47
USP44-202ENST00000393091 ASB18Q6ZVZ8 466 aa12.12□□□□□ -0.47
USP44-202ENST00000393091 SIAH3Q8IW03 269 aa12.12□□□□□ -0.47
USP44-202ENST00000393091 OR4C3Q8NH37 302 aa12.12□□□□□ -0.47
USP44-202ENST00000393091 PNPT1Q8TCS8 783 aaKnown RBP12.12□□□□□ -0.47
USP44-202ENST00000393091 CRELD1Q96HD1 420 aa12.12□□□□□ -0.47
USP44-202ENST00000393091 ADOQ96SZ5 270 aa12.12□□□□□ -0.47
USP44-202ENST00000393091 CDRT15Q96T59 188 aa12.12□□□□□ -0.47
USP44-202ENST00000393091 CADM1Q9BY67 442 aaKnown RBP12.12□□□□□ -0.47
USP44-202ENST00000393091 DEPPQ9NTK1 212 aa12.12□□□□□ -0.47
USP44-202ENST00000393091 CEP295Q9C0D2 2601 aa12.12□□□□□ -0.47
USP44-202ENST00000393091 SLC28A2O43868 658 aa12.12□□□□□ -0.47
USP44-202ENST00000393091 REM1O75628 298 aa12.12□□□□□ -0.47
USP44-202ENST00000393091 SERPINB7O75635 380 aa12.12□□□□□ -0.47
USP44-202ENST00000393091 EPPINO95925 133 aa12.12□□□□□ -0.47
USP44-202ENST00000393091 IGHG3P01860 377 aa12.12□□□□□ -0.47
USP44-202ENST00000393091 CD97P48960 835 aa12.12□□□□□ -0.47
USP44-202ENST00000393091 TRIM25Q14258 630 aaKnown RBP12.12□□□□□ -0.47
USP44-202ENST00000393091 PEX5LQ8IYB4 626 aa12.12□□□□□ -0.47
USP44-202ENST00000393091 WDSUB1Q8N9V3 476 aa12.12□□□□□ -0.47
USP44-202ENST00000393091 WDR60Q8WVS4 1066 aa12.12□□□□□ -0.47
USP44-202ENST00000393091 EFHD2Q96C19 240 aaPredicted RBP12.12□□□□□ -0.47
USP44-202ENST00000393091 C5orf34Q96MH7 638 aa12.12□□□□□ -0.47
USP44-202ENST00000393091 KCTD14Q9BQ13 255 aaPredicted RBP12.12□□□□□ -0.47
USP44-202ENST00000393091 ACKR4Q9NPB9 350 aa12.12□□□□□ -0.47
USP44-202ENST00000393091 DCAF13Q9NV06 445 aaKnown RBP12.12□□□□□ -0.47
USP44-202ENST00000393091 FLRT3Q9NZU0 649 aa12.12□□□□□ -0.47
USP44-202ENST00000393091 ICAM5Q9UMF0 924 aa12.12□□□□□ -0.47
USP44-202ENST00000393091 LHX6Q9UPM6 363 aa12.12□□□□□ -0.47
USP44-202ENST00000393091 ZNF17P17021 662 aa12.12□□□□□ -0.47
USP44-202ENST00000393091 KDELR2P33947 212 aa12.12□□□□□ -0.47
USP44-202ENST00000393091 SLC6A8P48029 635 aa12.12□□□□□ -0.47
USP44-202ENST00000393091 CPA2P48052 419 aa12.12□□□□□ -0.47
USP44-202ENST00000393091 ARG2P78540 354 aa12.12□□□□□ -0.47
USP44-202ENST00000393091 KLRB1Q12918 225 aa12.12□□□□□ -0.47
USP44-202ENST00000393091 IL20RBQ6UXL0 311 aa12.12□□□□□ -0.47
USP44-202ENST00000393091 CCDC121Q6ZUS5 278 aa12.12□□□□□ -0.47
USP44-202ENST00000393091 Q8NA96 180 aa12.12□□□□□ -0.47
USP44-202ENST00000393091 NR4A3Q92570 626 aa12.12□□□□□ -0.47
USP44-202ENST00000393091 MFRPQ9BY79 579 aa12.12□□□□□ -0.47
USP44-202ENST00000393091 LIN28AQ9H9Z2 209 aaKnown RBP12.12□□□□□ -0.47
USP44-202ENST00000393091 DNAJB12Q9NXW2 375 aaKnown RBP12.12□□□□□ -0.47
USP44-202ENST00000393091 TCRBV5S2A0A599 114 aa12.11□□□□□ -0.47
USP44-202ENST00000393091 ANKUB1A6NFN9 424 aa12.11□□□□□ -0.47
USP44-202ENST00000393091 B4DXG7 233 aa12.11□□□□□ -0.47
USP44-202ENST00000393091 K7EM74 188 aa12.11□□□□□ -0.47
USP44-202ENST00000393091 SCDO00767 359 aa12.11□□□□□ -0.47
USP44-202ENST00000393091 NME6O75414 186 aaPredicted RBP12.11□□□□□ -0.47
USP44-202ENST00000393091 LGI1O95970 557 aa12.11□□□□□ -0.47
USP44-202ENST00000393091 P04436 131 aa12.11□□□□□ -0.47
USP44-202ENST00000393091 ME2P23368 584 aa12.11□□□□□ -0.47
USP44-202ENST00000393091 HPCAP84074 193 aa12.11□□□□□ -0.47
USP44-202ENST00000393091 MAPK14Q16539 360 aa12.11□□□□□ -0.47
USP44-202ENST00000393091 FIGNL1Q6PIW4 674 aa12.11□□□□□ -0.47
USP44-202ENST00000393091 EIF3MQ7L2H7 374 aaKnown RBP12.11□□□□□ -0.47
USP44-202ENST00000393091 MDGA2Q7Z553 956 aa12.11□□□□□ -0.47
USP44-202ENST00000393091 SULF2Q8IWU5 870 aa12.11□□□□□ -0.47
USP44-202ENST00000393091 OR2M3Q8NG83 312 aa12.11□□□□□ -0.47
USP44-202ENST00000393091 THAP3Q8WTV1 239 aaPredicted RBP12.11□□□□□ -0.47
USP44-202ENST00000393091 MAGIXQ9H6Y5 334 aa12.11□□□□□ -0.47
USP44-202ENST00000393091 SNX13Q9Y5W8 968 aa12.11□□□□□ -0.47
USP44-202ENST00000393091 LINC01387J3KSC0 135 aa12.11□□□□□ -0.47
USP44-202ENST00000393091 CXCR6O00574 342 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms