RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 SDR9C7Q8NEX9 313 aa15.55■□□□□ 0.08
SCN3B-202ENST00000392770 OR8H1Q8NGG4 311 aa15.55■□□□□ 0.08
SCN3B-202ENST00000392770 NUDT8Q8WV74 236 aa15.55■□□□□ 0.08
SCN3B-202ENST00000392770 FCAMRQ8WWV6 532 aa15.55■□□□□ 0.08
SCN3B-202ENST00000392770 VDAC3Q9Y277 283 aa15.55■□□□□ 0.08
SCN3B-202ENST00000392770 TRAV27A0A087WT01 109 aa15.55■□□□□ 0.08
SCN3B-202ENST00000392770 TRBV4-1A0A0J9YWV2 114 aa15.55■□□□□ 0.08
SCN3B-202ENST00000392770 CDC14CA4D256 554 aa15.55■□□□□ 0.08
SCN3B-202ENST00000392770 TPD52L2O43399 206 aaKnown RBP15.55■□□□□ 0.08
SCN3B-202ENST00000392770 PER3P56645 1201 aa15.55■□□□□ 0.08
SCN3B-202ENST00000392770 CHRNEQ04844 493 aa15.55■□□□□ 0.08
SCN3B-202ENST00000392770 ZNF181Q2M3W8 571 aa15.55■□□□□ 0.08
SCN3B-202ENST00000392770 PAQR7Q86WK9 346 aa15.55■□□□□ 0.08
SCN3B-202ENST00000392770 ZFAND2BQ8WV99 257 aa15.55■□□□□ 0.08
SCN3B-202ENST00000392770 RFT1Q96AA3 541 aa15.55■□□□□ 0.08
SCN3B-202ENST00000392770 ADOQ96SZ5 270 aa15.55■□□□□ 0.08
SCN3B-202ENST00000392770 SMCHD1A6NHR9 2005 aa15.55■□□□□ 0.08
SCN3B-202ENST00000392770 ACOT8O14734 319 aa15.54■□□□□ 0.08
SCN3B-202ENST00000392770 MRPS14O60783 128 aaKnown RBP15.54■□□□□ 0.08
SCN3B-202ENST00000392770 ITGB8P26012 769 aa15.54■□□□□ 0.08
SCN3B-202ENST00000392770 CD83Q01151 205 aa15.54■□□□□ 0.08
SCN3B-202ENST00000392770 FAM71E1Q6IPT2 247 aa15.54■□□□□ 0.08
SCN3B-202ENST00000392770 ULK3Q6PHR2 472 aa15.54■□□□□ 0.08
SCN3B-202ENST00000392770 FAM83HQ6ZRV2 1179 aaPredicted RBP15.54■□□□□ 0.08
SCN3B-202ENST00000392770 TMEM41AQ96HV5 264 aa15.54■□□□□ 0.08
SCN3B-202ENST00000392770 MMP17Q9ULZ9 603 aa15.54■□□□□ 0.08
SCN3B-202ENST00000392770 LOC100509620A0A075B734 347 aa15.54■□□□□ 0.08
SCN3B-202ENST00000392770 C5orf51A6NDU8 294 aa15.54■□□□□ 0.08
SCN3B-202ENST00000392770 ZNF432O94892 652 aa15.54■□□□□ 0.08
SCN3B-202ENST00000392770 TFPTP0C1Z6 253 aa15.54■□□□□ 0.08
SCN3B-202ENST00000392770 GDI2P50395 445 aaKnown RBP15.54■□□□□ 0.08
SCN3B-202ENST00000392770 NFATC3Q12968 1075 aa15.54■□□□□ 0.08
SCN3B-202ENST00000392770 TECPR1Q7Z6L1 1165 aa15.54■□□□□ 0.08
SCN3B-202ENST00000392770 TMEM102Q8N9M5 508 aaPredicted RBP15.54■□□□□ 0.08
SCN3B-202ENST00000392770 OR8S1Q8NH09 359 aa15.54■□□□□ 0.08
SCN3B-202ENST00000392770 QRSL1Q9H0R6 528 aaKnown RBP15.54■□□□□ 0.08
SCN3B-202ENST00000392770 TMEM185BQ9H7F4 350 aa15.54■□□□□ 0.08
SCN3B-202ENST00000392770 PPT2Q9UMR5 302 aa15.54■□□□□ 0.08
SCN3B-202ENST00000392770 TRBV5-4A0A0C4DH59 114 aa15.54■□□□□ 0.08
SCN3B-202ENST00000392770 EFCAB7A8K855 629 aa15.54■□□□□ 0.08
SCN3B-202ENST00000392770 H3BML4 177 aa15.54■□□□□ 0.08
SCN3B-202ENST00000392770 GNG2P59768 71 aa15.54■□□□□ 0.08
SCN3B-202ENST00000392770 LILRA2Q8N149 483 aa15.54■□□□□ 0.08
SCN3B-202ENST00000392770 ACOT11Q8WXI4 607 aaPredicted RBP15.54■□□□□ 0.08
SCN3B-202ENST00000392770 AMDHD1Q96NU7 426 aa15.54■□□□□ 0.08
SCN3B-202ENST00000392770 ALG8Q9BVK2 526 aa15.54■□□□□ 0.08
SCN3B-202ENST00000392770 MOV10Q9HCE1 1003 aaKnown RBP15.54■□□□□ 0.08
SCN3B-202ENST00000392770 CD300AQ9UGN4 299 aa15.54■□□□□ 0.08
SCN3B-202ENST00000392770 KLK8O60259 260 aa15.54■□□□□ 0.08
SCN3B-202ENST00000392770 ALPLP05186 524 aa15.54■□□□□ 0.08
SCN3B-202ENST00000392770 TLE3Q04726 772 aa15.54■□□□□ 0.08
SCN3B-202ENST00000392770 SRYQ05066 204 aa15.54■□□□□ 0.08
SCN3B-202ENST00000392770 EEF1A1P5Q5VTE0 462 aa15.54■□□□□ 0.08
SCN3B-202ENST00000392770 PLAG1Q6DJT9 500 aa15.54■□□□□ 0.08
SCN3B-202ENST00000392770 NXPE2Q96DL1 559 aa15.54■□□□□ 0.08
SCN3B-202ENST00000392770 GLIPR2Q9H4G4 154 aa15.54■□□□□ 0.08
SCN3B-202ENST00000392770 GALK2Q01415 458 aa15.54■□□□□ 0.08
SCN3B-202ENST00000392770 PRAMEF17Q5VTA0 474 aa15.54■□□□□ 0.08
SCN3B-202ENST00000392770 SPRED1Q7Z699 444 aa15.54■□□□□ 0.08
SCN3B-202ENST00000392770 TMPRSS12Q86WS5 348 aa15.54■□□□□ 0.08
SCN3B-202ENST00000392770 PPP1R3BQ86XI6 285 aa15.54■□□□□ 0.08
SCN3B-202ENST00000392770 SPARTQ8N0X7 666 aa15.54■□□□□ 0.08
SCN3B-202ENST00000392770 FGF14Q92915 247 aa15.54■□□□□ 0.08
SCN3B-202ENST00000392770 ZMYND19Q96E35 227 aaPredicted RBP15.54■□□□□ 0.08
SCN3B-202ENST00000392770 ATG5Q9H1Y0 275 aa15.54■□□□□ 0.08
SCN3B-202ENST00000392770 TAS2R10Q9NYW0 307 aa15.54■□□□□ 0.08
SCN3B-202ENST00000392770 RPH3AQ9Y2J0 694 aaPredicted RBP15.54■□□□□ 0.08
SCN3B-202ENST00000392770 H3BMQ9 156 aa15.53■□□□□ 0.08
SCN3B-202ENST00000392770 SBK3P0C264 359 aa15.53■□□□□ 0.08
SCN3B-202ENST00000392770 CD27P26842 260 aa15.53■□□□□ 0.08
SCN3B-202ENST00000392770 WNT4P56705 351 aa15.53■□□□□ 0.08
SCN3B-202ENST00000392770 ARPC4P59998 168 aa15.53■□□□□ 0.08
SCN3B-202ENST00000392770 MRPL2Q5T653 305 aaKnown RBP15.53■□□□□ 0.08
SCN3B-202ENST00000392770 NAT6Q93015 286 aa15.53■□□□□ 0.08
SCN3B-202ENST00000392770 PGAM5Q96HS1 289 aa15.53■□□□□ 0.08
SCN3B-202ENST00000392770 COG8Q96MW5 612 aa15.53■□□□□ 0.08
SCN3B-202ENST00000392770 PHF7Q9BWX1 381 aaPredicted RBP15.53■□□□□ 0.08
SCN3B-202ENST00000392770 C1QTNF2Q9BXJ5 285 aa15.53■□□□□ 0.08
SCN3B-202ENST00000392770 A4GALTQ9NPC4 353 aa15.53■□□□□ 0.08
SCN3B-202ENST00000392770 TBC1D29Q9UFV1 150 aa15.53■□□□□ 0.08
SCN3B-202ENST00000392770 MCM3APO60318 1980 aa15.53■□□□□ 0.08
SCN3B-202ENST00000392770 SOX3P41225 446 aa15.53■□□□□ 0.08
SCN3B-202ENST00000392770 SLC6A12P48065 614 aa15.53■□□□□ 0.08
SCN3B-202ENST00000392770 PDE7AQ13946 482 aa15.53■□□□□ 0.08
SCN3B-202ENST00000392770 TRPV4Q9HBA0 871 aa15.53■□□□□ 0.08
SCN3B-202ENST00000392770 A0A0X1KG70 313 aa15.53■□□□□ 0.08
SCN3B-202ENST00000392770 PLPP1O14494 284 aa15.53■□□□□ 0.08
SCN3B-202ENST00000392770 EEF1E1O43324 174 aaKnown RBP15.53■□□□□ 0.08
SCN3B-202ENST00000392770 KDM4BO94953 1096 aa15.53■□□□□ 0.08
SCN3B-202ENST00000392770 MAS1P04201 325 aa15.53■□□□□ 0.08
SCN3B-202ENST00000392770 FAM111BQ6SJ93 734 aa15.53■□□□□ 0.08
SCN3B-202ENST00000392770 CHDHQ8NE62 594 aaPredicted RBP15.53■□□□□ 0.08
SCN3B-202ENST00000392770 CEP76Q8TAP6 659 aa15.53■□□□□ 0.08
SCN3B-202ENST00000392770 ABCD2Q9UBJ2 740 aa15.53■□□□□ 0.08
SCN3B-202ENST00000392770 RBBP6Q7Z6E9 1792 aaKnown RBP15.53■□□□□ 0.08
SCN3B-202ENST00000392770 COL11A1P12107 1806 aaPredicted RBP15.53■□□□□ 0.08
SCN3B-202ENST00000392770 SFTPDP35247 375 aa15.53■□□□□ 0.08
SCN3B-202ENST00000392770 DAPP51397 102 aa15.53■□□□□ 0.08
SCN3B-202ENST00000392770 PLP2Q04941 152 aa15.53■□□□□ 0.08
SCN3B-202ENST00000392770 ABHD17CQ6PCB6 329 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms