RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 THADAQ6YHU6 1953 aa17.75■□□□□ 0.43
CCDC50-202ENST00000392456 GNG14A0A1W2PPG7 69 aa17.75■□□□□ 0.43
CCDC50-202ENST00000392456 PLPP1O14494 284 aa17.75■□□□□ 0.43
CCDC50-202ENST00000392456 PLA2G10O15496 165 aa17.75■□□□□ 0.43
CCDC50-202ENST00000392456 PCDH7O60245 1069 aa17.75■□□□□ 0.43
CCDC50-202ENST00000392456 SELENOFO60613 162 aa17.75■□□□□ 0.43
CCDC50-202ENST00000392456 EIF3GO75821 320 aaKnown RBP eCLIP17.75■□□□□ 0.43
CCDC50-202ENST00000392456 CFDP00746 253 aaPredicted RBP17.75■□□□□ 0.43
CCDC50-202ENST00000392456 NME1P15531 152 aaKnown RBP17.75■□□□□ 0.43
CCDC50-202ENST00000392456 MAPK1P28482 360 aa17.75■□□□□ 0.43
CCDC50-202ENST00000392456 TIA1P31483 386 aaKnown RBP eCLIP17.75■□□□□ 0.433e-6■■□□□ 11.8
CCDC50-202ENST00000392456 OR4F3Q6IEY1 312 aa17.75■□□□□ 0.43
CCDC50-202ENST00000392456 HS3ST5Q8IZT8 346 aa17.75■□□□□ 0.43
CCDC50-202ENST00000392456 MMP21Q8N119 569 aa17.75■□□□□ 0.43
CCDC50-202ENST00000392456 DPP10Q8N608 796 aa17.75■□□□□ 0.43
CCDC50-202ENST00000392456 ZDHHC1Q8WTX9 485 aa17.75■□□□□ 0.43
CCDC50-202ENST00000392456 QRFPRQ96P65 431 aa17.75■□□□□ 0.43
CCDC50-202ENST00000392456 OR5M11Q96RB7 305 aa17.75■□□□□ 0.43
CCDC50-202ENST00000392456 INPP5KQ9BT40 448 aa17.75■□□□□ 0.43
CCDC50-202ENST00000392456 PCED1AQ9H1Q7 454 aa17.75■□□□□ 0.43
CCDC50-202ENST00000392456 OR51E2Q9H255 320 aa17.75■□□□□ 0.43
CCDC50-202ENST00000392456 A0A0G2JN53 185 aa17.75■□□□□ 0.43
CCDC50-202ENST00000392456 FAM74A7A6NL05 159 aa17.75■□□□□ 0.43
CCDC50-202ENST00000392456 SERPIND1P05546 499 aa17.75■□□□□ 0.43
CCDC50-202ENST00000392456 TRHRP34981 398 aaPredicted RBP17.75■□□□□ 0.43
CCDC50-202ENST00000392456 BLKP51451 505 aa17.75■□□□□ 0.43
CCDC50-202ENST00000392456 MAZP56270 477 aaKnown RBP17.75■□□□□ 0.43
CCDC50-202ENST00000392456 EEFSECP57772 596 aaKnown RBP17.75■□□□□ 0.43
CCDC50-202ENST00000392456 PPP1CAP62136 330 aa17.75■□□□□ 0.43
CCDC50-202ENST00000392456 PSPHP78330 225 aa17.75■□□□□ 0.43
CCDC50-202ENST00000392456 MC1RQ01726 317 aa17.75■□□□□ 0.43
CCDC50-202ENST00000392456 FAM74A3Q4VXF1 159 aa17.75■□□□□ 0.43
CCDC50-202ENST00000392456 SPIN4Q56A73 249 aa17.75■□□□□ 0.43
CCDC50-202ENST00000392456 MSRB3Q8IXL7 192 aa17.75■□□□□ 0.43
CCDC50-202ENST00000392456 MS4A15Q8N5U1 240 aa17.75■□□□□ 0.43
CCDC50-202ENST00000392456 AMER3Q8N944 861 aa17.75■□□□□ 0.43
CCDC50-202ENST00000392456 FAM181AQ8N9Y4 354 aa17.75■□□□□ 0.43
CCDC50-202ENST00000392456 OR8D4Q8NGM9 314 aa17.75■□□□□ 0.43
CCDC50-202ENST00000392456 GPR151Q8TDV0 419 aa17.75■□□□□ 0.43
CCDC50-202ENST00000392456 LMX1AQ8TE12 382 aa17.75■□□□□ 0.43
CCDC50-202ENST00000392456 MS4A8Q9BY19 250 aa17.75■□□□□ 0.43
CCDC50-202ENST00000392456 PIF1Q9H611 641 aa17.75■□□□□ 0.43
CCDC50-202ENST00000392456 LHX9Q9NQ69 397 aa17.75■□□□□ 0.43
CCDC50-202ENST00000392456 SERHLQ9NQF3 203 aa17.75■□□□□ 0.43
CCDC50-202ENST00000392456 MED9Q9NWA0 146 aa17.75■□□□□ 0.43
CCDC50-202ENST00000392456 IL6P05231 212 aa17.74■□□□□ 0.43
CCDC50-202ENST00000392456 ACPPP15309 386 aa17.74■□□□□ 0.43
CCDC50-202ENST00000392456 S100PP25815 95 aa17.74■□□□□ 0.43
CCDC50-202ENST00000392456 SNRPNP63162 240 aaKnown RBP17.74■□□□□ 0.43
CCDC50-202ENST00000392456 MAPKAPK3Q16644 382 aa17.74■□□□□ 0.43
CCDC50-202ENST00000392456 PAN3Q58A45 887 aaKnown RBP17.74■□□□□ 0.43
CCDC50-202ENST00000392456 TMPRSS11AQ6ZMR5 421 aa17.74■□□□□ 0.43
CCDC50-202ENST00000392456 SLC9B2Q86UD5 537 aa17.74■□□□□ 0.43
CCDC50-202ENST00000392456 PROSER1Q86XN7 944 aa17.74■□□□□ 0.43
CCDC50-202ENST00000392456 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.74■□□□□ 0.43
CCDC50-202ENST00000392456 CREB3L4Q8TEY5 395 aa17.74■□□□□ 0.43
CCDC50-202ENST00000392456 DNASE2BQ8WZ79 361 aa17.74■□□□□ 0.43
CCDC50-202ENST00000392456 KLHL31Q9H511 634 aa17.74■□□□□ 0.43
CCDC50-202ENST00000392456 ZNF768Q9H5H4 540 aaKnown RBP17.74■□□□□ 0.43
CCDC50-202ENST00000392456 SLC25A37Q9NYZ2 338 aa17.74■□□□□ 0.43
CCDC50-202ENST00000392456 CACNA1EQ15878 2313 aa17.74■□□□□ 0.43
CCDC50-202ENST00000392456 GABRR3A8MPY1 467 aa17.74■□□□□ 0.43
CCDC50-202ENST00000392456 CSF3P09919 207 aa17.74■□□□□ 0.43
CCDC50-202ENST00000392456 LAMP1P11279 417 aa17.74■□□□□ 0.43
CCDC50-202ENST00000392456 HTR1EP28566 365 aa17.74■□□□□ 0.43
CCDC50-202ENST00000392456 CDKN2CP42773 168 aa17.74■□□□□ 0.43
CCDC50-202ENST00000392456 LSSP48449 732 aa17.74■□□□□ 0.43
CCDC50-202ENST00000392456 NXPH1P58417 271 aa17.74■□□□□ 0.43
CCDC50-202ENST00000392456 MTPNP58546 118 aa17.74■□□□□ 0.43
CCDC50-202ENST00000392456 FGL1Q08830 312 aa17.74■□□□□ 0.43
CCDC50-202ENST00000392456 KHDRBS2Q5VWX1 349 aaKnown RBP17.74■□□□□ 0.43
CCDC50-202ENST00000392456 SLC16A13Q7RTY0 426 aa17.74■□□□□ 0.43
CCDC50-202ENST00000392456 UBE3DQ7Z6J8 389 aa17.74■□□□□ 0.43
CCDC50-202ENST00000392456 IQCHQ86VS3 1027 aa17.74■□□□□ 0.43
CCDC50-202ENST00000392456 SETD9Q8NE22 299 aa17.74■□□□□ 0.43
CCDC50-202ENST00000392456 NELL1Q92832 810 aa17.74■□□□□ 0.43
CCDC50-202ENST00000392456 C10orf90Q96M02 699 aa17.74■□□□□ 0.43
CCDC50-202ENST00000392456 KCNH6Q9H252 994 aa17.74■□□□□ 0.43
CCDC50-202ENST00000392456 IKZF5Q9H5V7 419 aa17.74■□□□□ 0.43
CCDC50-202ENST00000392456 GALNT9Q9HCQ5 603 aa17.74■□□□□ 0.43
CCDC50-202ENST00000392456 MAB21L2Q9Y586 359 aa17.74■□□□□ 0.43
CCDC50-202ENST00000392456 GSAPA4D1B5 854 aa17.73■□□□□ 0.43
CCDC50-202ENST00000392456 C4orf51C9J302 202 aa17.73■□□□□ 0.43
CCDC50-202ENST00000392456 PROM1O43490 865 aa17.73■□□□□ 0.43
CCDC50-202ENST00000392456 HPGDSO60760 199 aa17.73■□□□□ 0.43
CCDC50-202ENST00000392456 WNT3P56703 355 aa17.73■□□□□ 0.43
CCDC50-202ENST00000392456 SIGLEC14Q08ET2 396 aa17.73■□□□□ 0.43
CCDC50-202ENST00000392456 HFEQ30201 348 aa17.73■□□□□ 0.43
CCDC50-202ENST00000392456 TCTE1Q5JU00 501 aa17.73■□□□□ 0.43
CCDC50-202ENST00000392456 KLHL17Q6TDP4 642 aa17.73■□□□□ 0.43
CCDC50-202ENST00000392456 SLC36A4Q6YBV0 504 aa17.73■□□□□ 0.43
CCDC50-202ENST00000392456 FAM92BQ6ZTR7 304 aa17.73■□□□□ 0.43
CCDC50-202ENST00000392456 MAML2Q8IZL2 1156 aaPredicted RBP17.73■□□□□ 0.43
CCDC50-202ENST00000392456 FAM174AQ8TBP5 190 aa17.73■□□□□ 0.43
CCDC50-202ENST00000392456 SFT2D1Q8WV19 159 aa17.73■□□□□ 0.43
CCDC50-202ENST00000392456 PTDSS2Q9BVG9 487 aa17.73■□□□□ 0.43
CCDC50-202ENST00000392456 MND1Q9BWT6 205 aa17.73■□□□□ 0.43
CCDC50-202ENST00000392456 TWSG1Q9GZX9 223 aa17.73■□□□□ 0.43
CCDC50-202ENST00000392456 DUSP15Q9H1R2 295 aaPredicted RBP17.73■□□□□ 0.43
CCDC50-202ENST00000392456 PIGUQ9H490 435 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms