RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 DUSP19Q8WTR2 217 aa11.5□□□□□ -0.57
GGPS1-203ENST00000391855 NUDT8Q8WV74 236 aa11.5□□□□□ -0.57
GGPS1-203ENST00000391855 OIT3Q8WWZ8 545 aa11.5□□□□□ -0.57
GGPS1-203ENST00000391855 ZFP3Q96NJ6 502 aa11.5□□□□□ -0.57
GGPS1-203ENST00000391855 OR7D2Q96RA2 312 aa11.5□□□□□ -0.57
GGPS1-203ENST00000391855 PIGQQ9BRB3 760 aa11.5□□□□□ -0.57
GGPS1-203ENST00000391855 CALHM2Q9HA72 323 aa11.5□□□□□ -0.57
GGPS1-203ENST00000391855 KCNJ16Q9NPI9 418 aa11.5□□□□□ -0.57
GGPS1-203ENST00000391855 COL12A1Q99715 3063 aa11.49□□□□□ -0.57
GGPS1-203ENST00000391855 MBD3L4A6NDZ8 208 aaPredicted RBP11.49□□□□□ -0.57
GGPS1-203ENST00000391855 MBD3L3A6NE82 208 aaPredicted RBP11.49□□□□□ -0.57
GGPS1-203ENST00000391855 MBD3L5A6NJ08 208 aaPredicted RBP11.49□□□□□ -0.57
GGPS1-203ENST00000391855 H0Y3Z8 333 aa11.49□□□□□ -0.57
GGPS1-203ENST00000391855 UBDO15205 165 aa11.49□□□□□ -0.57
GGPS1-203ENST00000391855 ZIC3O60481 467 aa11.49□□□□□ -0.57
GGPS1-203ENST00000391855 DIAPH2O60879 1101 aa11.49□□□□□ -0.57
GGPS1-203ENST00000391855 SLC22A3O75751 556 aa11.49□□□□□ -0.57
GGPS1-203ENST00000391855 CPSF4O95639 269 aaKnown RBP11.49□□□□□ -0.57
GGPS1-203ENST00000391855 IL6P05231 212 aa11.49□□□□□ -0.57
GGPS1-203ENST00000391855 GUSBP08236 651 aa11.49□□□□□ -0.57
GGPS1-203ENST00000391855 COX6B1P14854 86 aa11.49□□□□□ -0.57
GGPS1-203ENST00000391855 ZNF17P17021 662 aa11.49□□□□□ -0.57
GGPS1-203ENST00000391855 MATN1P21941 496 aa11.49□□□□□ -0.57
GGPS1-203ENST00000391855 KHKP50053 298 aa11.49□□□□□ -0.57
GGPS1-203ENST00000391855 LHX2P50458 406 aa11.49□□□□□ -0.57
GGPS1-203ENST00000391855 EEFSECP57772 596 aaKnown RBP11.49□□□□□ -0.57
GGPS1-203ENST00000391855 UFM1P61960 85 aa11.49□□□□□ -0.57
GGPS1-203ENST00000391855 SLC25A35Q3KQZ1 300 aa11.49□□□□□ -0.57
GGPS1-203ENST00000391855 DCST1Q5T197 706 aa11.49□□□□□ -0.57
GGPS1-203ENST00000391855 CCNJQ5T5M9 372 aa11.49□□□□□ -0.57
GGPS1-203ENST00000391855 ATAD3BQ5T9A4 648 aa11.49□□□□□ -0.57
GGPS1-203ENST00000391855 SAXO2Q658L1 398 aa11.49□□□□□ -0.57
GGPS1-203ENST00000391855 ZNF787Q6DD87 383 aa11.49□□□□□ -0.57
GGPS1-203ENST00000391855 EPGNQ6UW88 154 aa11.49□□□□□ -0.57
GGPS1-203ENST00000391855 APOOLQ6UXV4 268 aa11.49□□□□□ -0.57
GGPS1-203ENST00000391855 MAVSQ7Z434 540 aa11.49□□□□□ -0.57
GGPS1-203ENST00000391855 ANKRD46Q86W74 232 aa11.49□□□□□ -0.57
GGPS1-203ENST00000391855 CCDC71Q8IV32 467 aaPredicted RBP11.49□□□□□ -0.57
GGPS1-203ENST00000391855 CHDHQ8NE62 594 aaPredicted RBP11.49□□□□□ -0.57
GGPS1-203ENST00000391855 OR4C3Q8NH37 302 aa11.49□□□□□ -0.57
GGPS1-203ENST00000391855 MBD3L2Q8NHZ7 208 aaPredicted RBP11.49□□□□□ -0.57
GGPS1-203ENST00000391855 STON2Q8WXE9 905 aa11.49□□□□□ -0.57
GGPS1-203ENST00000391855 NEURL3Q96EH8 262 aa11.49□□□□□ -0.57
GGPS1-203ENST00000391855 OTUB1Q96FW1 271 aaPredicted RBP11.49□□□□□ -0.57
GGPS1-203ENST00000391855 PANX1Q96RD7 426 aa11.49□□□□□ -0.57
GGPS1-203ENST00000391855 SDR39U1Q9NRG7 319 aaPredicted RBP11.49□□□□□ -0.57
GGPS1-203ENST00000391855 MED11Q9P086 117 aa11.49□□□□□ -0.57
GGPS1-203ENST00000391855 STOML1Q9UBI4 398 aa11.49□□□□□ -0.57
GGPS1-203ENST00000391855 A0A0G2JNJ9 132 aa11.48□□□□□ -0.57
GGPS1-203ENST00000391855 IL2RAP01589 272 aa11.48□□□□□ -0.57
GGPS1-203ENST00000391855 ZNF708P17019 499 aa11.48□□□□□ -0.57
GGPS1-203ENST00000391855 GRNP28799 593 aaKnown RBP11.48□□□□□ -0.57
GGPS1-203ENST00000391855 CEACAM8P31997 349 aaPredicted RBP11.48□□□□□ -0.57
GGPS1-203ENST00000391855 CHI3L1P36222 383 aaPredicted RBP11.48□□□□□ -0.57
GGPS1-203ENST00000391855 MAGEA8P43361 318 aa11.48□□□□□ -0.57
GGPS1-203ENST00000391855 MRPL19P49406 292 aaKnown RBP11.48□□□□□ -0.57
GGPS1-203ENST00000391855 ATP12AP54707 1039 aa11.48□□□□□ -0.57
GGPS1-203ENST00000391855 SUMO3P55854 103 aaPredicted RBP11.48□□□□□ -0.57
GGPS1-203ENST00000391855 NME5P56597 212 aa11.48□□□□□ -0.57
GGPS1-203ENST00000391855 STX1BP61266 288 aa11.48□□□□□ -0.57
GGPS1-203ENST00000391855 EEF1A1P68104 462 aaKnown RBP11.48□□□□□ -0.57
GGPS1-203ENST00000391855 PHC1P78364 1004 aa11.48□□□□□ -0.57
GGPS1-203ENST00000391855 CDSNQ15517 529 aa11.48□□□□□ -0.57
GGPS1-203ENST00000391855 FLYWCH1Q4VC44 716 aa11.48□□□□□ -0.57
GGPS1-203ENST00000391855 EEF1A1P5Q5VTE0 462 aa11.48□□□□□ -0.57
GGPS1-203ENST00000391855 C16orf62Q7Z3J2 963 aa11.48□□□□□ -0.57
GGPS1-203ENST00000391855 ZAR1Q86SH2 424 aa11.48□□□□□ -0.57
GGPS1-203ENST00000391855 GALNT10Q86SR1 603 aa11.48□□□□□ -0.57
GGPS1-203ENST00000391855 MIER2Q8N344 545 aa11.48□□□□□ -0.57
GGPS1-203ENST00000391855 MEIOBQ8N635 442 aa11.48□□□□□ -0.57
GGPS1-203ENST00000391855 CKAP2Q8WWK9 683 aa11.48□□□□□ -0.57
GGPS1-203ENST00000391855 ZBTB8AQ96BR9 441 aa11.48□□□□□ -0.57
GGPS1-203ENST00000391855 LRRC46Q96FV0 321 aa11.48□□□□□ -0.57
GGPS1-203ENST00000391855 MAGEB18Q96M61 343 aa11.48□□□□□ -0.57
GGPS1-203ENST00000391855 OR52E6Q96RD3 313 aa11.48□□□□□ -0.57
GGPS1-203ENST00000391855 UCN2Q96RP3 112 aa11.48□□□□□ -0.57
GGPS1-203ENST00000391855 SPOCK3Q9BQ16 436 aa11.48□□□□□ -0.57
GGPS1-203ENST00000391855 SLC35A5Q9BS91 424 aa11.48□□□□□ -0.57
GGPS1-203ENST00000391855 CCDC28BQ9BUN5 200 aa11.48□□□□□ -0.57
GGPS1-203ENST00000391855 RTN4RQ9BZR6 473 aa11.48□□□□□ -0.57
GGPS1-203ENST00000391855 NMUR2Q9GZQ4 415 aa11.48□□□□□ -0.57
GGPS1-203ENST00000391855 RMND5AQ9H871 391 aa11.48□□□□□ -0.57
GGPS1-203ENST00000391855 SLC24A3Q9HC58 644 aa11.48□□□□□ -0.57
GGPS1-203ENST00000391855 TCF7L2Q9NQB0 619 aa11.48□□□□□ -0.57
GGPS1-203ENST00000391855 POLE3Q9NRF9 147 aa11.48□□□□□ -0.57
GGPS1-203ENST00000391855 Q9UFV3 132 aa11.48□□□□□ -0.57
GGPS1-203ENST00000391855 RPH3AQ9Y2J0 694 aaPredicted RBP11.48□□□□□ -0.57
GGPS1-203ENST00000391855 FREM3P0C091 2139 aa11.48□□□□□ -0.57
GGPS1-203ENST00000391855 SETXQ7Z333 2677 aaKnown RBP11.48□□□□□ -0.57
GGPS1-203ENST00000391855 ARHGAP21Q5T5U3 1957 aa11.47□□□□□ -0.57
GGPS1-203ENST00000391855 C7orf72A4D263 438 aa11.47□□□□□ -0.57
GGPS1-203ENST00000391855 FAM90A27PA6NNH2 459 aa11.47□□□□□ -0.57
GGPS1-203ENST00000391855 B4DXG7 233 aa11.47□□□□□ -0.57
GGPS1-203ENST00000391855 NPIPB9F8W1W9 429 aa11.47□□□□□ -0.57
GGPS1-203ENST00000391855 DVL2O14641 736 aa11.47□□□□□ -0.57
GGPS1-203ENST00000391855 STX11O75558 287 aa11.47□□□□□ -0.57
GGPS1-203ENST00000391855 SASH3O75995 380 aa11.47□□□□□ -0.57
GGPS1-203ENST00000391855 POU3F2P20265 443 aaPredicted RBP11.47□□□□□ -0.57
GGPS1-203ENST00000391855 IL12AP29459 219 aa11.47□□□□□ -0.57
GGPS1-203ENST00000391855 ADH7P40394 386 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms