RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 G6PC3Q9BUM1 346 aa18.58■□□□□ 0.56
SHANK1-203ENST00000391813 PINK1Q9BXM7 581 aa18.58■□□□□ 0.56
SHANK1-203ENST00000391813 TXNL4BQ9NX01 149 aaKnown RBP18.58■□□□□ 0.56
SHANK1-203ENST00000391813 HMX2A2RU54 273 aa18.58■□□□□ 0.56
SHANK1-203ENST00000391813 KLF8O95600 359 aaPredicted RBP18.58■□□□□ 0.56
SHANK1-203ENST00000391813 SYPP08247 313 aa18.58■□□□□ 0.56
SHANK1-203ENST00000391813 OR8U9P0C7N5 309 aa18.58■□□□□ 0.56
SHANK1-203ENST00000391813 AMY2BP19961 511 aa18.58■□□□□ 0.56
SHANK1-203ENST00000391813 DDCP20711 480 aa18.58■□□□□ 0.56
SHANK1-203ENST00000391813 PIGAP37287 484 aa18.58■□□□□ 0.56
SHANK1-203ENST00000391813 ETV6P41212 452 aa18.58■□□□□ 0.56
SHANK1-203ENST00000391813 CRYZQ08257 329 aaKnown RBP18.58■□□□□ 0.56
SHANK1-203ENST00000391813 TIGD3Q6B0B8 471 aa18.58■□□□□ 0.56
SHANK1-203ENST00000391813 OR2T11Q8NH01 316 aa18.58■□□□□ 0.56
SHANK1-203ENST00000391813 DCUN1D4Q92564 292 aa18.58■□□□□ 0.56
SHANK1-203ENST00000391813 SEC61A2Q9H9S3 476 aa18.58■□□□□ 0.56
SHANK1-203ENST00000391813 GABRPO00591 440 aa18.57■□□□□ 0.56
SHANK1-203ENST00000391813 ZNF35P13682 527 aa18.57■□□□□ 0.56
SHANK1-203ENST00000391813 RAB3AP20336 220 aa18.57■□□□□ 0.56
SHANK1-203ENST00000391813 CDK2P24941 298 aa18.57■□□□□ 0.56
SHANK1-203ENST00000391813 SLAMF1Q13291 335 aa18.57■□□□□ 0.56
SHANK1-203ENST00000391813 ELAVL3Q14576 367 aaKnown RBP18.57■□□□□ 0.56
SHANK1-203ENST00000391813 DHCR24Q15392 516 aa18.57■□□□□ 0.56
SHANK1-203ENST00000391813 SLC14A2Q15849 920 aa18.57■□□□□ 0.56
SHANK1-203ENST00000391813 LRIT3Q3SXY7 679 aa18.57■□□□□ 0.56
SHANK1-203ENST00000391813 CD276Q5ZPR3 534 aa18.57■□□□□ 0.56
SHANK1-203ENST00000391813 TMEM150AQ86TG1 271 aa18.57■□□□□ 0.56
SHANK1-203ENST00000391813 MRPL43Q8N983 215 aaKnown RBP18.57■□□□□ 0.56
SHANK1-203ENST00000391813 OR5AK2Q8NH90 309 aa18.57■□□□□ 0.56
SHANK1-203ENST00000391813 WDR20Q8TBZ3 569 aa18.57■□□□□ 0.56
SHANK1-203ENST00000391813 C3orf49Q96BT1 292 aa18.57■□□□□ 0.56
SHANK1-203ENST00000391813 KLHDC7BQ96G42 594 aa18.57■□□□□ 0.56
SHANK1-203ENST00000391813 SMCO3A2RU48 225 aa18.57■□□□□ 0.56
SHANK1-203ENST00000391813 SULT1B1O43704 296 aa18.57■□□□□ 0.56
SHANK1-203ENST00000391813 BPIP17213 487 aa18.57■□□□□ 0.56
SHANK1-203ENST00000391813 IDO2Q6ZQW0 420 aa18.57■□□□□ 0.56
SHANK1-203ENST00000391813 GDPD3Q7L5L3 318 aa18.57■□□□□ 0.56
SHANK1-203ENST00000391813 DYNC2LI1Q8TCX1 351 aa18.57■□□□□ 0.56
SHANK1-203ENST00000391813 PMEPA1Q969W9 287 aa18.57■□□□□ 0.56
SHANK1-203ENST00000391813 ZNF559Q9BR84 538 aa18.57■□□□□ 0.56
SHANK1-203ENST00000391813 DUSP21Q9H596 190 aa18.57■□□□□ 0.56
SHANK1-203ENST00000391813 GMEB2Q9UKD1 530 aa18.57■□□□□ 0.56
SHANK1-203ENST00000391813 THSD7AQ9UPZ6 1657 aa18.57■□□□□ 0.56
SHANK1-203ENST00000391813 M0R3H8 397 aa18.57■□□□□ 0.56
SHANK1-203ENST00000391813 SSX5O60225 188 aa18.57■□□□□ 0.56
SHANK1-203ENST00000391813 ASGR2P07307 311 aa18.57■□□□□ 0.56
SHANK1-203ENST00000391813 PRKCAP17252 672 aa18.57■□□□□ 0.56
SHANK1-203ENST00000391813 ERN2Q76MJ5 926 aaKnown RBP18.57■□□□□ 0.56
SHANK1-203ENST00000391813 GKN2Q86XP6 184 aa18.57■□□□□ 0.56
SHANK1-203ENST00000391813 LRRC25Q8N386 305 aaPredicted RBP18.57■□□□□ 0.56
SHANK1-203ENST00000391813 ZNF419Q96HQ0 510 aaPredicted RBP18.57■□□□□ 0.56
SHANK1-203ENST00000391813 DHRS9Q9BPW9 319 aa18.57■□□□□ 0.56
SHANK1-203ENST00000391813 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.57■□□□□ 0.56
SHANK1-203ENST00000391813 SDHAF3Q9NRP4 125 aa18.57■□□□□ 0.56
SHANK1-203ENST00000391813 MT-ND4P03905 459 aa18.57■□□□□ 0.56
SHANK1-203ENST00000391813 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.57■□□□□ 0.56
SHANK1-203ENST00000391813 C14orf28Q4W4Y0 310 aa18.57■□□□□ 0.56
SHANK1-203ENST00000391813 ARHGAP12Q8IWW6 846 aa18.57■□□□□ 0.56
SHANK1-203ENST00000391813 DDX60Q8IY21 1712 aaKnown RBP18.57■□□□□ 0.56
SHANK1-203ENST00000391813 WDSUB1Q8N9V3 476 aa18.57■□□□□ 0.56
SHANK1-203ENST00000391813 VNN3Q9NY84 501 aa18.57■□□□□ 0.56
SHANK1-203ENST00000391813 USP22Q9UPT9 525 aa18.57■□□□□ 0.56
SHANK1-203ENST00000391813 POLHQ9Y253 713 aa18.57■□□□□ 0.56
SHANK1-203ENST00000391813 YARS2Q9Y2Z4 477 aaKnown RBP18.57■□□□□ 0.56
SHANK1-203ENST00000391813 TVP23AA6NH52 213 aa18.56■□□□□ 0.56
SHANK1-203ENST00000391813 LILRB3O75022 631 aa18.56■□□□□ 0.56
SHANK1-203ENST00000391813 ZNF8P17098 575 aaPredicted RBP18.56■□□□□ 0.56
SHANK1-203ENST00000391813 PBX2P40425 430 aa18.56■□□□□ 0.56
SHANK1-203ENST00000391813 RIDAP52758 137 aaKnown RBP18.56■□□□□ 0.56
SHANK1-203ENST00000391813 KDM4DQ6B0I6 523 aa18.56■□□□□ 0.56
SHANK1-203ENST00000391813 SLC9B2Q86UD5 537 aa18.56■□□□□ 0.56
SHANK1-203ENST00000391813 ZNF587Q96SQ5 575 aaPredicted RBP18.56■□□□□ 0.56
SHANK1-203ENST00000391813 SLC5A7Q9GZV3 580 aa18.56■□□□□ 0.56
SHANK1-203ENST00000391813 COPS3Q9UNS2 423 aa18.56■□□□□ 0.56
SHANK1-203ENST00000391813 SLC33A1O00400 549 aaPredicted RBP18.56■□□□□ 0.56
SHANK1-203ENST00000391813 CSTAP01040 98 aa18.56■□□□□ 0.56
SHANK1-203ENST00000391813 GP2P55259 537 aaKnown RBP18.56■□□□□ 0.56
SHANK1-203ENST00000391813 DEFA6Q01524 100 aa18.56■□□□□ 0.56
SHANK1-203ENST00000391813 AMZ1Q400G9 498 aa18.56■□□□□ 0.56
SHANK1-203ENST00000391813 ALKAL2Q6UX46 152 aa18.56■□□□□ 0.56
SHANK1-203ENST00000391813 RAB11FIP2Q7L804 512 aa18.56■□□□□ 0.56
SHANK1-203ENST00000391813 BOCQ9BWV1 1114 aa18.56■□□□□ 0.56
SHANK1-203ENST00000391813 CSNK1G3Q9Y6M4 447 aa18.56■□□□□ 0.56
SHANK1-203ENST00000391813 A6NL46 340 aa18.56■□□□□ 0.56
SHANK1-203ENST00000391813 ADAM23O75077 832 aa18.56■□□□□ 0.56
SHANK1-203ENST00000391813 WDPCPO95876 746 aa18.56■□□□□ 0.56
SHANK1-203ENST00000391813 JUNDP17535 347 aa18.56■□□□□ 0.56
SHANK1-203ENST00000391813 RAB5CP51148 216 aa18.56■□□□□ 0.56
SHANK1-203ENST00000391813 ZNF805Q5CZA5 627 aa18.56■□□□□ 0.56
SHANK1-203ENST00000391813 TCTE1Q5JU00 501 aa18.56■□□□□ 0.56
SHANK1-203ENST00000391813 AKIP1Q9NQ31 210 aa18.56■□□□□ 0.56
SHANK1-203ENST00000391813 CORINQ9Y5Q5 1042 aa18.56■□□□□ 0.56
SHANK1-203ENST00000391813 RFXAPO00287 272 aa18.55■□□□□ 0.56
SHANK1-203ENST00000391813 UBL3O95164 117 aa18.55■□□□□ 0.56
SHANK1-203ENST00000391813 EGFP01133 1207 aa18.55■□□□□ 0.56
SHANK1-203ENST00000391813 DCNP07585 359 aaKnown RBP18.55■□□□□ 0.56
SHANK1-203ENST00000391813 ACOT11Q8WXI4 607 aaPredicted RBP18.55■□□□□ 0.56
SHANK1-203ENST00000391813 PRRT1Q99946 306 aa18.55■□□□□ 0.56
SHANK1-203ENST00000391813 WDR83Q9BRX9 315 aaKnown RBP18.55■□□□□ 0.56
SHANK1-203ENST00000391813 SLC38A1Q9H2H9 487 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms