RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 ADORA2BP29275 332 aa1.8□□□□□ -2.12
TRAV40-201ENST00000390467 MARCKSP29966 332 aaPredicted RBP1.8□□□□□ -2.12
TRAV40-201ENST00000390467 ATP6V1E1P36543 226 aa1.8□□□□□ -2.12
TRAV40-201ENST00000390467 NUDT1P36639 197 aa1.8□□□□□ -2.12
TRAV40-201ENST00000390467 TNNT3P45378 269 aaPredicted RBP1.8□□□□□ -2.12
TRAV40-201ENST00000390467 TIMM10P62072 90 aa1.8□□□□□ -2.12
TRAV40-201ENST00000390467 PAX5Q02548 391 aa1.8□□□□□ -2.12
TRAV40-201ENST00000390467 C16orf72Q14CZ0 275 aa1.8□□□□□ -2.12
TRAV40-201ENST00000390467 TAF7Q15545 349 aaPredicted RBP1.8□□□□□ -2.12
TRAV40-201ENST00000390467 AANATQ16613 207 aa1.8□□□□□ -2.12
TRAV40-201ENST00000390467 SLC39A12Q504Y0 691 aa1.8□□□□□ -2.12
TRAV40-201ENST00000390467 CMPK2Q5EBM0 449 aa1.8□□□□□ -2.12
TRAV40-201ENST00000390467 LIPKQ5VXJ0 399 aa1.8□□□□□ -2.12
TRAV40-201ENST00000390467 CNSTQ6PJW8 725 aa1.8□□□□□ -2.12
TRAV40-201ENST00000390467 TMEM270Q6UE05 265 aa1.8□□□□□ -2.12
TRAV40-201ENST00000390467 ZNF619Q8N2I2 560 aa1.8□□□□□ -2.12
TRAV40-201ENST00000390467 CENPSQ8N2Z9 138 aa1.8□□□□□ -2.12
TRAV40-201ENST00000390467 LPCAT1Q8NF37 534 aa1.8□□□□□ -2.12
TRAV40-201ENST00000390467 OR2A12Q8NGT7 310 aa1.8□□□□□ -2.12
TRAV40-201ENST00000390467 ZNF606Q8WXB4 792 aa1.8□□□□□ -2.12
TRAV40-201ENST00000390467 SYAP1Q96A49 352 aaPredicted RBP1.8□□□□□ -2.12
TRAV40-201ENST00000390467 CCDC51Q96ER9 411 aa1.8□□□□□ -2.12
TRAV40-201ENST00000390467 JAKMIP1Q96N16 626 aaKnown RBP1.8□□□□□ -2.12
TRAV40-201ENST00000390467 DESI2Q9BSY9 194 aa1.8□□□□□ -2.12
TRAV40-201ENST00000390467 FAM124BQ9H5Z6 455 aaPredicted RBP1.8□□□□□ -2.12
TRAV40-201ENST00000390467 RPAP3Q9H6T3 665 aaPredicted RBP1.8□□□□□ -2.12
TRAV40-201ENST00000390467 SUDS3Q9H7L9 328 aaPredicted RBP1.8□□□□□ -2.12
TRAV40-201ENST00000390467 ZWILCHQ9H900 591 aa1.8□□□□□ -2.12
TRAV40-201ENST00000390467 GRPEL1Q9HAV7 217 aa1.8□□□□□ -2.12
TRAV40-201ENST00000390467 FANCFQ9NPI8 374 aa1.8□□□□□ -2.12
TRAV40-201ENST00000390467 HPF1Q9NWY4 346 aa1.8□□□□□ -2.12
TRAV40-201ENST00000390467 UTP6Q9NYH9 597 aaKnown RBP1.8□□□□□ -2.12
TRAV40-201ENST00000390467 OR1A1Q9P1Q5 309 aa1.8□□□□□ -2.12
TRAV40-201ENST00000390467 FZR1Q9UM11 496 aa1.8□□□□□ -2.12
TRAV40-201ENST00000390467 EXOSC1Q9Y3B2 195 aaKnown RBP1.8□□□□□ -2.12
TRAV40-201ENST00000390467 KNSTRNQ9Y448 316 aa1.8□□□□□ -2.12
TRAV40-201ENST00000390467 ZMYM6O95789 1325 aa1.8□□□□□ -2.12
TRAV40-201ENST00000390467 TRIOBPQ9H2D6 2365 aa1.8□□□□□ -2.12
TRAV40-201ENST00000390467 SCN2AQ99250 2005 aa1.79□□□□□ -2.12
TRAV40-201ENST00000390467 IGHV1OR15-1A0A075B7D0 117 aa1.79□□□□□ -2.12
TRAV40-201ENST00000390467 SYNJ2BP-COX16A0A087WUM0 186 aa1.79□□□□□ -2.12
TRAV40-201ENST00000390467 FAM166BA8MTA8 275 aa1.79□□□□□ -2.12
TRAV40-201ENST00000390467 IMPA2O14732 288 aa1.79□□□□□ -2.12
TRAV40-201ENST00000390467 CABYRO75952 493 aa1.79□□□□□ -2.12
TRAV40-201ENST00000390467 TGDSO95455 350 aa1.79□□□□□ -2.12
TRAV40-201ENST00000390467 GUCA1CO95843 209 aa1.79□□□□□ -2.12
TRAV40-201ENST00000390467 INSP01308 110 aa1.79□□□□□ -2.12
TRAV40-201ENST00000390467 IGHV4-34P06331 123 aa1.79□□□□□ -2.12
TRAV40-201ENST00000390467 NEFHP12036 1026 aa1.79□□□□□ -2.12
TRAV40-201ENST00000390467 GZMAP12544 262 aa1.79□□□□□ -2.12
TRAV40-201ENST00000390467 KRT13P13646 458 aa1.79□□□□□ -2.12
TRAV40-201ENST00000390467 RCC1P18754 421 aaPredicted RBP1.79□□□□□ -2.12
TRAV40-201ENST00000390467 TMOD1P28289 359 aa1.79□□□□□ -2.12
TRAV40-201ENST00000390467 CDH5P33151 784 aaPredicted RBP1.79□□□□□ -2.12
TRAV40-201ENST00000390467 UGT1A5P35504 534 aa1.79□□□□□ -2.12
TRAV40-201ENST00000390467 PRPHP41219 470 aa1.79□□□□□ -2.12
TRAV40-201ENST00000390467 SH3BGRP55822 239 aaPredicted RBP1.79□□□□□ -2.12
TRAV40-201ENST00000390467 CCZ1BP86790 482 aa1.79□□□□□ -2.12
TRAV40-201ENST00000390467 CCZ1P86791 482 aaPredicted RBP1.79□□□□□ -2.12
TRAV40-201ENST00000390467 PLOD1Q02809 727 aaPredicted RBP1.79□□□□□ -2.12
TRAV40-201ENST00000390467 DMTNQ08495 405 aa1.79□□□□□ -2.12
TRAV40-201ENST00000390467 ZP4Q12836 540 aa1.79□□□□□ -2.12
TRAV40-201ENST00000390467 MRPL28Q13084 256 aaKnown RBP1.79□□□□□ -2.12
TRAV40-201ENST00000390467 UNC119Q13432 240 aa1.79□□□□□ -2.12
TRAV40-201ENST00000390467 ACSF3Q4G176 576 aaPredicted RBP1.79□□□□□ -2.12
TRAV40-201ENST00000390467 GLRA4Q5JXX5 417 aa1.79□□□□□ -2.12
TRAV40-201ENST00000390467 GPBP1Q86WP2 473 aa1.79□□□□□ -2.12
TRAV40-201ENST00000390467 C17orf82Q86X59 251 aaPredicted RBP1.79□□□□□ -2.12
TRAV40-201ENST00000390467 SKA3Q8IX90 412 aa1.79□□□□□ -2.12
TRAV40-201ENST00000390467 MNS1Q8NEH6 495 aa1.79□□□□□ -2.12
TRAV40-201ENST00000390467 BRSK1Q8TDC3 778 aa1.79□□□□□ -2.12
TRAV40-201ENST00000390467 BLOC1S5Q8TDH9 187 aa1.79□□□□□ -2.12
TRAV40-201ENST00000390467 ANKRD49Q8WVL7 239 aa1.79□□□□□ -2.12
TRAV40-201ENST00000390467 ZNF75CPQ92670 426 aaPredicted RBP1.79□□□□□ -2.12
TRAV40-201ENST00000390467 VPS39Q96JC1 886 aa1.79□□□□□ -2.12
TRAV40-201ENST00000390467 GSDMAQ96QA5 445 aa1.79□□□□□ -2.12
TRAV40-201ENST00000390467 FAM213AQ9BRX8 229 aa1.79□□□□□ -2.12
TRAV40-201ENST00000390467 TRPV6Q9H1D0 765 aa1.79□□□□□ -2.12
TRAV40-201ENST00000390467 C2orf40Q9H1Z8 148 aa1.79□□□□□ -2.12
TRAV40-201ENST00000390467 TMEM245Q9H330 911 aa1.79□□□□□ -2.12
TRAV40-201ENST00000390467 YY1AP1Q9H869 796 aa1.79□□□□□ -2.12
TRAV40-201ENST00000390467 DUS2Q9NX74 493 aaKnown RBP1.79□□□□□ -2.12
TRAV40-201ENST00000390467 ANKMY1Q9P2S6 941 aa1.79□□□□□ -2.12
TRAV40-201ENST00000390467 ZMAT5Q9UDW3 170 aaKnown RBP1.79□□□□□ -2.12
TRAV40-201ENST00000390467 CTNNA3Q9UI47 895 aa1.79□□□□□ -2.12
TRAV40-201ENST00000390467 LAMP5Q9UJQ1 280 aa1.79□□□□□ -2.12
TRAV40-201ENST00000390467 SCML2Q9UQR0 700 aa1.79□□□□□ -2.12
TRAV40-201ENST00000390467 USP16Q9Y5T5 823 aa1.79□□□□□ -2.12
TRAV40-201ENST00000390467 FKBP7Q9Y680 259 aa1.79□□□□□ -2.12
TRAV40-201ENST00000390467 CDH10Q9Y6N8 788 aa1.79□□□□□ -2.12
TRAV40-201ENST00000390467 ASTN1O14525 1302 aa1.79□□□□□ -2.12
TRAV40-201ENST00000390467 PIK3R4Q99570 1358 aa1.79□□□□□ -2.12
TRAV40-201ENST00000390467 THSD7BQ9C0I4 1608 aa1.79□□□□□ -2.12
TRAV40-201ENST00000390467 TMEM89A2RUT3 159 aa1.78□□□□□ -2.12
TRAV40-201ENST00000390467 FBLL1A6NHQ2 334 aaKnown RBP1.78□□□□□ -2.12
TRAV40-201ENST00000390467 DLGAP1O14490 977 aa1.78□□□□□ -2.12
TRAV40-201ENST00000390467 ZNF263O14978 683 aa1.78□□□□□ -2.12
TRAV40-201ENST00000390467 KLHL41O60662 606 aa1.78□□□□□ -2.12
TRAV40-201ENST00000390467 KIAA0754O94854 1291 aa1.78□□□□□ -2.12
TRAV40-201ENST00000390467 GOSR1O95249 250 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms