RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 FBLP22087 321 aaKnown RBP23.34■■□□□ 1.33
SHOX2-201ENST00000389589 FPR3P25089 353 aa23.34■■□□□ 1.33
SHOX2-201ENST00000389589 STAT5AP42229 794 aa23.34■■□□□ 1.33
SHOX2-201ENST00000389589 RFX3P48380 749 aa23.34■■□□□ 1.33
SHOX2-201ENST00000389589 SMSP52788 366 aa23.34■■□□□ 1.33
SHOX2-201ENST00000389589 GINS1Q14691 196 aa23.34■■□□□ 1.33
SHOX2-201ENST00000389589 HLA-BQ31612 363 aa23.34■■□□□ 1.33
SHOX2-201ENST00000389589 NPSR1Q6W5P4 371 aa23.34■■□□□ 1.33
SHOX2-201ENST00000389589 RCBTB1Q8NDN9 531 aa23.34■■□□□ 1.33
SHOX2-201ENST00000389589 B3GNT7Q8NFL0 401 aa23.34■■□□□ 1.33
SHOX2-201ENST00000389589 TEX47Q8TBZ9 253 aa23.34■■□□□ 1.33
SHOX2-201ENST00000389589 ZNF501Q96CX3 271 aaPredicted RBP23.34■■□□□ 1.33
SHOX2-201ENST00000389589 POLDIP3Q9BY77 421 aaKnown RBP23.34■■□□□ 1.33
SHOX2-201ENST00000389589 ENPP5Q9UJA9 477 aa23.34■■□□□ 1.33
SHOX2-201ENST00000389589 DTX4Q9Y2E6 619 aa23.34■■□□□ 1.33
SHOX2-201ENST00000389589 C17orf105B2RV13 164 aa23.33■■□□□ 1.33
SHOX2-201ENST00000389589 DYRK3O43781 588 aa23.33■■□□□ 1.33
SHOX2-201ENST00000389589 DYNC1I2Q13409 638 aaKnown RBP23.33■■□□□ 1.33
SHOX2-201ENST00000389589 OR1Q1Q15612 314 aa23.33■■□□□ 1.33
SHOX2-201ENST00000389589 OR4N2Q8NGD1 307 aa23.33■■□□□ 1.33
SHOX2-201ENST00000389589 FAM46AQ96IP4 442 aaKnown RBP23.33■■□□□ 1.33
SHOX2-201ENST00000389589 IL4I1Q96RQ9 567 aa23.33■■□□□ 1.33
SHOX2-201ENST00000389589 ZNF559Q9BR84 538 aa23.33■■□□□ 1.33
SHOX2-201ENST00000389589 FGF21Q9NSA1 209 aa23.33■■□□□ 1.33
SHOX2-201ENST00000389589 ST6GALNAC1Q9NSC7 600 aaPredicted RBP23.33■■□□□ 1.33
SHOX2-201ENST00000389589 GKN3PP0CG01 181 aa23.32■■□□□ 1.32
SHOX2-201ENST00000389589 CT45A8P0DMV1 189 aa23.32■■□□□ 1.32
SHOX2-201ENST00000389589 CT45A9P0DMV2 189 aa23.32■■□□□ 1.32
SHOX2-201ENST00000389589 PIPP12273 146 aaPredicted RBP23.32■■□□□ 1.32
SHOX2-201ENST00000389589 PRG2P13727 222 aa23.32■■□□□ 1.32
SHOX2-201ENST00000389589 PSMB9P28065 219 aa23.32■■□□□ 1.32
SHOX2-201ENST00000389589 ST3GAL4Q11206 333 aa23.32■■□□□ 1.32
SHOX2-201ENST00000389589 ZNF141Q15928 474 aa23.32■■□□□ 1.32
SHOX2-201ENST00000389589 OCLNQ16625 522 aa23.32■■□□□ 1.32
SHOX2-201ENST00000389589 CT45A2Q5DJT8 189 aa23.32■■□□□ 1.32
SHOX2-201ENST00000389589 PDZK1Q5T2W1 519 aa23.32■■□□□ 1.32
SHOX2-201ENST00000389589 PEAR1Q5VY43 1037 aaPredicted RBP23.32■■□□□ 1.32
SHOX2-201ENST00000389589 KIF18BQ86Y91 864 aa23.32■■□□□ 1.32
SHOX2-201ENST00000389589 FAM181AQ8N9Y4 354 aa23.32■■□□□ 1.32
SHOX2-201ENST00000389589 ZDHHC19Q8WVZ1 309 aaPredicted RBP23.32■■□□□ 1.32
SHOX2-201ENST00000389589 SLC35B4Q969S0 331 aa23.32■■□□□ 1.32
SHOX2-201ENST00000389589 CBLCQ9ULV8 474 aa23.32■■□□□ 1.32
SHOX2-201ENST00000389589 SEC16AO15027 2179 aa23.32■■□□□ 1.32
SHOX2-201ENST00000389589 A0A1B0GX78 115 aa23.32■■□□□ 1.32
SHOX2-201ENST00000389589 IGKV1D-16P01601 117 aa23.32■■□□□ 1.32
SHOX2-201ENST00000389589 HTR2AP28223 471 aa23.32■■□□□ 1.32
SHOX2-201ENST00000389589 C21orf33P30042 268 aaPredicted RBP23.32■■□□□ 1.32
SHOX2-201ENST00000389589 SLC25A30Q5SVS4 291 aa23.32■■□□□ 1.32
SHOX2-201ENST00000389589 C1orf210Q8IVY1 113 aa23.32■■□□□ 1.32
SHOX2-201ENST00000389589 NRMQ8IXM6 262 aa23.32■■□□□ 1.32
SHOX2-201ENST00000389589 RNF113BQ8IZP6 322 aaKnown RBP23.32■■□□□ 1.32
SHOX2-201ENST00000389589 C9orf43Q8TAL5 461 aaPredicted RBP23.32■■□□□ 1.32
SHOX2-201ENST00000389589 TMEM255BQ8WV15 326 aa23.32■■□□□ 1.32
SHOX2-201ENST00000389589 TIMMDC1Q9NPL8 285 aa23.32■■□□□ 1.32
SHOX2-201ENST00000389589 TVP23BQ9NYZ1 205 aa23.32■■□□□ 1.32
SHOX2-201ENST00000389589 CNIH4Q9P003 139 aa23.32■■□□□ 1.32
SHOX2-201ENST00000389589 OR10H1Q9Y4A9 318 aa23.32■■□□□ 1.32
SHOX2-201ENST00000389589 IGKV3D-11A0A0A0MRZ8 115 aa23.31■■□□□ 1.32
SHOX2-201ENST00000389589 CPED1A4D0V7 1026 aa23.31■■□□□ 1.32
SHOX2-201ENST00000389589 ENTPD6O75354 484 aa23.31■■□□□ 1.32
SHOX2-201ENST00000389589 PCYT1AP49585 367 aa23.31■■□□□ 1.32
SHOX2-201ENST00000389589 MFSD4BQ5TF39 518 aa23.31■■□□□ 1.32
SHOX2-201ENST00000389589 TCEANCQ8N8B7 351 aa23.31■■□□□ 1.32
SHOX2-201ENST00000389589 PTPMT1Q8WUK0 201 aaPredicted RBP23.31■■□□□ 1.32
SHOX2-201ENST00000389589 YIPF6Q96EC8 236 aa23.31■■□□□ 1.32
SHOX2-201ENST00000389589 DPYSL5Q9BPU6 564 aa23.31■■□□□ 1.32
SHOX2-201ENST00000389589 PRRG3Q9BZD7 231 aa23.31■■□□□ 1.32
SHOX2-201ENST00000389589 COL5A1P20908 1838 aaPredicted RBP23.31■■□□□ 1.32
SHOX2-201ENST00000389589 ADAMTS9Q9P2N4 1935 aa23.31■■□□□ 1.32
SHOX2-201ENST00000389589 KLF4O43474 513 aa23.31■■□□□ 1.32
SHOX2-201ENST00000389589 SIGLEC6O43699 453 aa23.31■■□□□ 1.32
SHOX2-201ENST00000389589 CLPSP04118 112 aa23.31■■□□□ 1.32
SHOX2-201ENST00000389589 STSP08842 583 aa23.31■■□□□ 1.32
SHOX2-201ENST00000389589 ANKRD34CP0C6C1 535 aa23.31■■□□□ 1.32
SHOX2-201ENST00000389589 SLC15A1P46059 708 aa23.31■■□□□ 1.32
SHOX2-201ENST00000389589 MEDAGQ5VYS4 303 aa23.31■■□□□ 1.32
SHOX2-201ENST00000389589 SLC27A4Q6P1M0 643 aa23.31■■□□□ 1.32
SHOX2-201ENST00000389589 GUSBP11Q6P575 273 aa23.31■■□□□ 1.32
SHOX2-201ENST00000389589 ZNF613Q6PF04 617 aa23.31■■□□□ 1.32
SHOX2-201ENST00000389589 MAML2Q8IZL2 1156 aaPredicted RBP23.31■■□□□ 1.32
SHOX2-201ENST00000389589 FAM26EQ8N5C1 309 aa23.31■■□□□ 1.32
SHOX2-201ENST00000389589 IQCF1Q8N6M8 205 aa23.31■■□□□ 1.32
SHOX2-201ENST00000389589 OSTF1Q92882 214 aa23.31■■□□□ 1.32
SHOX2-201ENST00000389589 SENP5Q96HI0 755 aaPredicted RBP23.31■■□□□ 1.32
SHOX2-201ENST00000389589 PRSS27Q9BQR3 290 aa23.31■■□□□ 1.32
SHOX2-201ENST00000389589 DCUN1D5Q9BTE7 237 aa23.31■■□□□ 1.32
SHOX2-201ENST00000389589 ITPAQ9BY32 194 aa23.31■■□□□ 1.32
SHOX2-201ENST00000389589 TMEM27Q9HBJ8 222 aa23.31■■□□□ 1.32
SHOX2-201ENST00000389589 PNO1Q9NRX1 252 aaKnown RBP23.31■■□□□ 1.32
SHOX2-201ENST00000389589 CFL2Q9Y281 166 aa23.31■■□□□ 1.32
SHOX2-201ENST00000389589 LY6G6EA0A0G2JKS1 128 aa23.3■■□□□ 1.32
SHOX2-201ENST00000389589 NPIPB9F8W1W9 429 aa23.3■■□□□ 1.32
SHOX2-201ENST00000389589 MAN1A2O60476 641 aa23.3■■□□□ 1.32
SHOX2-201ENST00000389589 ATP12AP54707 1039 aa23.3■■□□□ 1.32
SHOX2-201ENST00000389589 MINDY4Q4G0A6 757 aa23.3■■□□□ 1.32
SHOX2-201ENST00000389589 PRAMEF17Q5VTA0 474 aa23.3■■□□□ 1.32
SHOX2-201ENST00000389589 SLC16A12Q6ZSM3 486 aa23.3■■□□□ 1.32
SHOX2-201ENST00000389589 MRGPREQ86SM8 312 aa23.3■■□□□ 1.32
SHOX2-201ENST00000389589 TMEM151BQ8IW70 566 aa23.3■■□□□ 1.32
SHOX2-201ENST00000389589 CMIPQ8IY22 773 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms