RNA–Protein interactions for RNA: ENST00000383801.6

SEC13-203, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC13, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-203ENST00000383801 SLC25A19Q9HC21 320 aa12.57□□□□□ -0.4
SEC13-203ENST00000383801 DHCR7Q9UBM7 475 aaKnown RBP12.57□□□□□ -0.4
SEC13-203ENST00000383801 PSORS1C1Q9UIG5 152 aa12.57□□□□□ -0.4
SEC13-203ENST00000383801 TMEM5Q9Y2B1 443 aa12.57□□□□□ -0.4
SEC13-203ENST00000383801 SLC35A3Q9Y2D2 325 aa12.57□□□□□ -0.4
SEC13-203ENST00000383801 MAU2Q9Y6X3 613 aa12.57□□□□□ -0.4
SEC13-203ENST00000383801 CABIN1Q9Y6J0 2220 aa12.56□□□□□ -0.4
SEC13-203ENST00000383801 EFCAB10A6NFE3 127 aa12.56□□□□□ -0.4
SEC13-203ENST00000383801 FRG2CA6NGY1 282 aa12.56□□□□□ -0.4
SEC13-203ENST00000383801 CPSF4LA6NMK7 179 aaKnown RBP12.56□□□□□ -0.4
SEC13-203ENST00000383801 SNTNA6NMZ2 147 aa12.56□□□□□ -0.4
SEC13-203ENST00000383801 EFCAB7A8K855 629 aa12.56□□□□□ -0.4
SEC13-203ENST00000383801 H3BN98 237 aa12.56□□□□□ -0.4
SEC13-203ENST00000383801 GP1BAP07359 652 aa12.56□□□□□ -0.4
SEC13-203ENST00000383801 PIPP12273 146 aaPredicted RBP12.56□□□□□ -0.4
SEC13-203ENST00000383801 RBM34P42696 430 aaKnown RBP12.56□□□□□ -0.4
SEC13-203ENST00000383801 OMPP47874 163 aa12.56□□□□□ -0.4
SEC13-203ENST00000383801 OCLNQ16625 522 aa12.56□□□□□ -0.4
SEC13-203ENST00000383801 TMEM44Q2T9K0 475 aa12.56□□□□□ -0.4
SEC13-203ENST00000383801 RPL13AP3Q6NVV1 102 aa12.56□□□□□ -0.4
SEC13-203ENST00000383801 PTCHD4Q6ZW05 846 aa12.56□□□□□ -0.4
SEC13-203ENST00000383801 MRGPREQ86SM8 312 aa12.56□□□□□ -0.4
SEC13-203ENST00000383801 ERI1Q8IV48 349 aaKnown RBP12.56□□□□□ -0.4
SEC13-203ENST00000383801 SHISA5Q8N114 240 aa12.56□□□□□ -0.4
SEC13-203ENST00000383801 TMEM105Q8N8V8 129 aa12.56□□□□□ -0.4
SEC13-203ENST00000383801 ZNF527Q8NB42 609 aa12.56□□□□□ -0.4
SEC13-203ENST00000383801 WDR36Q8NI36 951 aaKnown RBP12.56□□□□□ -0.4
SEC13-203ENST00000383801 C9orf43Q8TAL5 461 aaPredicted RBP12.56□□□□□ -0.4
SEC13-203ENST00000383801 RORBQ92753 470 aa12.56□□□□□ -0.4
SEC13-203ENST00000383801 OSTF1Q92882 214 aa12.56□□□□□ -0.4
SEC13-203ENST00000383801 MUL1Q969V5 352 aa12.56□□□□□ -0.4
SEC13-203ENST00000383801 TMIGD2Q96BF3 282 aa12.56□□□□□ -0.4
SEC13-203ENST00000383801 POLDIP3Q9BY77 421 aaKnown RBP12.56□□□□□ -0.4
SEC13-203ENST00000383801 RASSF1Q9NS23 344 aa12.56□□□□□ -0.4
SEC13-203ENST00000383801 ZNF226Q9NYT6 803 aa12.56□□□□□ -0.4
SEC13-203ENST00000383801 KCNE5Q9UJ90 142 aa12.56□□□□□ -0.4
SEC13-203ENST00000383801 OR10H1Q9Y4A9 318 aa12.56□□□□□ -0.4
SEC13-203ENST00000383801 ADAMTS20P59510 1910 aa12.56□□□□□ -0.4
SEC13-203ENST00000383801 TECTAO75443 2155 aa12.55□□□□□ -0.4
SEC13-203ENST00000383801 ZNF99A8MXY4 864 aaPredicted RBP12.55□□□□□ -0.4
SEC13-203ENST00000383801 NTN3O00634 580 aaPredicted RBP12.55□□□□□ -0.4
SEC13-203ENST00000383801 TO15178 435 aa12.55□□□□□ -0.4
SEC13-203ENST00000383801 AHCYL1O43865 530 aa12.55□□□□□ -0.4
SEC13-203ENST00000383801 XPNPEP2O43895 674 aa12.55□□□□□ -0.4
SEC13-203ENST00000383801 NOL3O60936 208 aaKnown RBP12.55□□□□□ -0.4
SEC13-203ENST00000383801 TRMUO75648 421 aaKnown RBP12.55□□□□□ -0.4
SEC13-203ENST00000383801 IL33O95760 270 aa12.55□□□□□ -0.4
SEC13-203ENST00000383801 CLPSP04118 112 aa12.55□□□□□ -0.4
SEC13-203ENST00000383801 TP53P04637 393 aaPredicted RBP12.55□□□□□ -0.4
SEC13-203ENST00000383801 HTR1AP08908 422 aa12.55□□□□□ -0.4
SEC13-203ENST00000383801 FMO3P31513 532 aa12.55□□□□□ -0.4
SEC13-203ENST00000383801 PGDP52209 483 aa12.55□□□□□ -0.4
SEC13-203ENST00000383801 DAB2P98082 770 aa12.55□□□□□ -0.4
SEC13-203ENST00000383801 OCA2Q04671 838 aa12.55□□□□□ -0.4
SEC13-203ENST00000383801 EMX1Q04741 257 aaPredicted RBP12.55□□□□□ -0.4
SEC13-203ENST00000383801 OR1Q1Q15612 314 aa12.55□□□□□ -0.4
SEC13-203ENST00000383801 NSDHLQ15738 373 aa12.55□□□□□ -0.4
SEC13-203ENST00000383801 SYT6Q5T7P8 510 aaPredicted RBP12.55□□□□□ -0.4
SEC13-203ENST00000383801 CDK20Q8IZL9 346 aa12.55□□□□□ -0.4
SEC13-203ENST00000383801 FAM26EQ8N5C1 309 aa12.55□□□□□ -0.4
SEC13-203ENST00000383801 BCORP1Q8N888 145 aa12.55□□□□□ -0.4
SEC13-203ENST00000383801 IFI44Q8TCB0 444 aa12.55□□□□□ -0.4
SEC13-203ENST00000383801 RAB2BQ8WUD1 216 aa12.55□□□□□ -0.4
SEC13-203ENST00000383801 HSPBAP1Q96EW2 488 aa12.55□□□□□ -0.4
SEC13-203ENST00000383801 CRELD1Q96HD1 420 aa12.55□□□□□ -0.4
SEC13-203ENST00000383801 LCORQ96JN0 433 aaPredicted RBP12.55□□□□□ -0.4
SEC13-203ENST00000383801 UBQLN4Q9NRR5 601 aa12.55□□□□□ -0.4
SEC13-203ENST00000383801 PNO1Q9NRX1 252 aaKnown RBP12.55□□□□□ -0.4
SEC13-203ENST00000383801 MED17Q9NVC6 651 aa12.55□□□□□ -0.4
SEC13-203ENST00000383801 FBXO34Q9NWN3 711 aa12.55□□□□□ -0.4
SEC13-203ENST00000383801 IL20Q9NYY1 176 aa12.55□□□□□ -0.4
SEC13-203ENST00000383801 COL5A1P20908 1838 aaPredicted RBP12.55□□□□□ -0.4
SEC13-203ENST00000383801 TRIM64BA6NI03 449 aa12.54□□□□□ -0.4
SEC13-203ENST00000383801 PEX12O00623 359 aa12.54□□□□□ -0.4
SEC13-203ENST00000383801 KLF4O43474 513 aa12.54□□□□□ -0.4
SEC13-203ENST00000383801 CHP2O43745 196 aa12.54□□□□□ -0.4
SEC13-203ENST00000383801 HYAL3O43820 417 aaPredicted RBP12.54□□□□□ -0.4
SEC13-203ENST00000383801 CDK1P06493 297 aa12.54□□□□□ -0.4
SEC13-203ENST00000383801 FGF5P12034 268 aa12.54□□□□□ -0.4
SEC13-203ENST00000383801 FUT4P22083 530 aa12.54□□□□□ -0.4
SEC13-203ENST00000383801 ACVR2AP27037 513 aa12.54□□□□□ -0.4
SEC13-203ENST00000383801 DCDP81605 110 aaKnown RBP12.54□□□□□ -0.4
SEC13-203ENST00000383801 EFNB1P98172 346 aa12.54□□□□□ -0.4
SEC13-203ENST00000383801 NEDD8Q15843 81 aa12.54□□□□□ -0.4
SEC13-203ENST00000383801 MINDY4Q4G0A6 757 aa12.54□□□□□ -0.4
SEC13-203ENST00000383801 RNLSQ5VYX0 342 aa12.54□□□□□ -0.4
SEC13-203ENST00000383801 SLC27A4Q6P1M0 643 aa12.54□□□□□ -0.4
SEC13-203ENST00000383801 NPSR1Q6W5P4 371 aa12.54□□□□□ -0.4
SEC13-203ENST00000383801 PRICKLE2Q7Z3G6 844 aa12.54□□□□□ -0.4
SEC13-203ENST00000383801 PPP1R3BQ86XI6 285 aa12.54□□□□□ -0.4
SEC13-203ENST00000383801 CLVS1Q8IUQ0 354 aaPredicted RBP12.54□□□□□ -0.4
SEC13-203ENST00000383801 METTL27Q8N6F8 245 aaPredicted RBP12.54□□□□□ -0.4
SEC13-203ENST00000383801 OR1N1Q8NGS0 311 aa12.54□□□□□ -0.4
SEC13-203ENST00000383801 TEX47Q8TBZ9 253 aa12.54□□□□□ -0.4
SEC13-203ENST00000383801 ZNF721Q8TF20 911 aa12.54□□□□□ -0.4
SEC13-203ENST00000383801 OR6C1Q96RD1 312 aa12.54□□□□□ -0.4
SEC13-203ENST00000383801 GFM1Q96RP9 751 aaKnown RBP12.54□□□□□ -0.4
SEC13-203ENST00000383801 COPS4Q9BT78 406 aa12.54□□□□□ -0.4
SEC13-203ENST00000383801 CCDC90BQ9GZT6 254 aa12.54□□□□□ -0.4
SEC13-203ENST00000383801 SLC26A1Q9H2B4 701 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms