RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 PRKCAP17252 672 aa11.96□□□□□ -0.5
DNMT3A-204ENST00000380756 S1PR1P21453 382 aa11.96□□□□□ -0.5
DNMT3A-204ENST00000380756 CTF1Q16619 201 aa11.96□□□□□ -0.5
DNMT3A-204ENST00000380756 DNAJC5GQ8N7S2 189 aa11.96□□□□□ -0.5
DNMT3A-204ENST00000380756 PTCHD1Q96NR3 888 aa11.96□□□□□ -0.5
DNMT3A-204ENST00000380756 LYSMD1Q96S90 227 aa11.96□□□□□ -0.5
DNMT3A-204ENST00000380756 ZNF471Q9BX82 626 aaPredicted RBP11.96□□□□□ -0.5
DNMT3A-204ENST00000380756 EVA1BQ9NVM1 165 aa11.96□□□□□ -0.5
DNMT3A-204ENST00000380756 RBM7Q9Y580 266 aaKnown RBP11.96□□□□□ -0.5
DNMT3A-204ENST00000380756 CEP290O15078 2479 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 A0A1B0GVI7 797 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 WASH3PC4AMC7 463 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 RNF13O43567 381 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 UQCRC1P31930 480 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 BMPR1AP36894 532 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 XCR1P46094 333 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 EIF1AXP47813 144 aaKnown RBP11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 RASGEF1BQ0VAM2 473 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 LRRC37A5PQ49AS3 106 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 PYCR3Q53H96 274 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 SPERTQ8NA61 448 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 CDS1Q92903 461 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 BADQ92934 168 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 ZIC5Q96T25 663 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 CLEC4EQ9ULY5 219 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 CCL26Q9Y258 94 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 C13orf42A0A1B0GVH6 325 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 NPIPA5E9PKD4 350 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 CLEC2LP0C7M8 214 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 PGAM2P15259 253 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 MMP12P39900 470 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 EIF5AL1Q6IS14 154 aaKnown RBP11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 METAP1DQ6UB28 335 aaPredicted RBP11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 CHRDL2Q6WN34 429 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 UBQLNLQ8IYU4 475 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 METTL27Q8N6F8 245 aaPredicted RBP11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 OR52E1Q8NGJ3 308 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 SFXN5Q8TD22 340 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 DNAJA3Q96EY1 480 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 ZNF419Q96HQ0 510 aaPredicted RBP11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 ZNF582Q96NG8 517 aaPredicted RBP11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 MS4A8Q9BY19 250 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 SIAEQ9HAT2 523 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 AKIP1Q9NQ31 210 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 CXXC1Q9P0U4 656 aaPredicted RBP11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 RABL2AQ9UBK7 228 aaPredicted RBP11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 NPIPA1Q9UND3 350 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 RABL2BQ9UNT1 228 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 UGT2A1Q9Y4X1 527 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 NPIPA5A0A0B4J1W7 369 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 NPIPA7E9PJI5 369 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 EIF1AYO14602 144 aaKnown RBP11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 FZD6O60353 706 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 RLN2P04090 185 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 GYPBP06028 91 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 NPIPA8P0DM63 369 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 CBX5P45973 191 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 SF3B4Q15427 424 aaKnown RBP eCLIP11.95□□□□□ -0.59e-8■■■■■ 56.7
DNMT3A-204ENST00000380756 CCNJQ5T5M9 372 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 RAB12Q6IQ22 244 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 PTOV1Q86YD1 416 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 ZNF615Q8N8J6 731 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 OR6T1Q8NGN1 323 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 SLC7A13Q8TCU3 470 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 TSACCQ96A04 125 aaPredicted RBP11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 GAL3ST3Q96A11 431 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 PKMYT1Q99640 499 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 GABARAPL3Q9BY60 117 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 ATG5Q9H1Y0 275 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 IL21RQ9HBE5 538 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 WBP1LQ9NX94 342 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 ADAM29Q9UKF5 820 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 NUBP2Q9Y5Y2 271 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 KIF13BQ9NQT8 1826 aa11.95□□□□□ -0.5
DNMT3A-204ENST00000380756 COL5A3P25940 1745 aaPredicted RBP11.94□□□□□ -0.5
DNMT3A-204ENST00000380756 ZNF888P0CJ79 500 aaPredicted RBP11.94□□□□□ -0.5
DNMT3A-204ENST00000380756 FRKP42685 505 aaPredicted RBP11.94□□□□□ -0.5
DNMT3A-204ENST00000380756 RIPPLY1Q0D2K3 151 aa11.94□□□□□ -0.5
DNMT3A-204ENST00000380756 XAF1Q6GPH4 301 aa11.94□□□□□ -0.5
DNMT3A-204ENST00000380756 B3GLCTQ6Y288 498 aa11.94□□□□□ -0.5
DNMT3A-204ENST00000380756 KIF18BQ86Y91 864 aa11.94□□□□□ -0.5
DNMT3A-204ENST00000380756 TMIEQ8NEW7 156 aa11.94□□□□□ -0.5
DNMT3A-204ENST00000380756 SMPDL3BQ92485 455 aa11.94□□□□□ -0.5
DNMT3A-204ENST00000380756 C16orf58Q96GQ5 468 aa11.94□□□□□ -0.5
DNMT3A-204ENST00000380756 C11orf54Q9H0W9 315 aaPredicted RBP11.94□□□□□ -0.5
DNMT3A-204ENST00000380756 NUP50Q9UKX7 468 aa11.94□□□□□ -0.5
DNMT3A-204ENST00000380756 MEMO1Q9Y316 297 aa11.94□□□□□ -0.5
DNMT3A-204ENST00000380756 ALG5Q9Y673 324 aa11.94□□□□□ -0.5
DNMT3A-204ENST00000380756 NINQ8N4C6 2090 aa11.94□□□□□ -0.5
DNMT3A-204ENST00000380756 B4GALT3O60512 393 aa11.94□□□□□ -0.5
DNMT3A-204ENST00000380756 PAHP00439 452 aa11.94□□□□□ -0.5
DNMT3A-204ENST00000380756 MAS1P04201 325 aa11.94□□□□□ -0.5
DNMT3A-204ENST00000380756 GIFP27352 417 aa11.94□□□□□ -0.5
DNMT3A-204ENST00000380756 TCEAL5Q5H9L2 206 aa11.94□□□□□ -0.5
DNMT3A-204ENST00000380756 KCTD9Q7L273 389 aa11.94□□□□□ -0.5
DNMT3A-204ENST00000380756 AVL9Q8NBF6 648 aa11.94□□□□□ -0.5
DNMT3A-204ENST00000380756 OR2T4Q8NH00 348 aa11.94□□□□□ -0.5
DNMT3A-204ENST00000380756 CREB3L4Q8TEY5 395 aa11.94□□□□□ -0.5
DNMT3A-204ENST00000380756 YIPF6Q96EC8 236 aa11.94□□□□□ -0.5
DNMT3A-204ENST00000380756 C4orf36Q96KX1 117 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms