RNA–Protein interactions for RNA: ENST00000377327.8

CRNKL1-201, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,370 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-201ENST00000377327 C20orf85Q9H1P6 137 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 LAMP5Q9UJQ1 280 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 ZNF225Q9UK10 706 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 MRPS33Q9Y291 106 aaKnown RBP8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 CFAP20Q9Y6A4 193 aaKnown RBP8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 TRIM64BA6NI03 449 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 SULT1C2O00338 296 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 FRS3O43559 492 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 MMP2P08253 660 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 CSF1P09603 554 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 DRD2P14416 443 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 PGAM2P15259 253 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 FOSL1P15407 271 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 AK4P27144 223 aaPredicted RBP8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 TRIM23P36406 574 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 FRKP42685 505 aaPredicted RBP8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 SPINT3P49223 89 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 AVPI1Q5T686 147 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 ULK3Q6PHR2 472 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 POMZP3Q6PJE2 187 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 CRTC1Q6UUV9 634 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 FAM83HQ6ZRV2 1179 aaPredicted RBP8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 TMEM173Q86WV6 379 aaPredicted RBP8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 PTOV1Q86YD1 416 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 HORMAD2Q8N7B1 307 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 WDR48Q8TAF3 677 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 CHTF18Q8WVB6 975 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 GLYATL1Q969I3 302 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 NEIL2Q969S2 332 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 NECAB3Q96P71 396 aaPredicted RBP8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 QRSL1Q9H0R6 528 aaKnown RBP8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 ACTL8Q9H568 366 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 MCCC2Q9HCC0 563 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 STC2O76061 302 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 SPARCP09486 303 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 HOXA9P31269 272 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 CCR9P51686 369 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 TAS2R38P59533 333 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 TPBGQ13641 420 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 RNASE10Q5GAN6 216 aaKnown RBP8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 ARHGAP11AQ6P4F7 1023 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 TSSK4Q6SA08 328 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 ENPP7Q6UWV6 458 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 NLRC3Q7RTR2 1065 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 OTOP2Q7RTS6 562 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 MSRB3Q8IXL7 192 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 TP53I13Q8NBR0 393 aaPredicted RBP8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 OR52N1Q8NH53 320 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 SYNPRQ8TBG9 265 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 C10orf90Q96M02 699 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 SYT17Q9BSW7 474 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 SLC38A1Q9H2H9 487 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 INPP5EQ9NRR6 644 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 PHPT1Q9NRX4 125 aaPredicted RBP8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 PLAGL1Q9UM63 463 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 A8MVJ9 347 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 M0QZQ0 153 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 PSMD9O00233 223 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 LGI1O95970 557 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 ACSM4P0C7M7 580 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 ZNF250P15622 560 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 GRK5P34947 590 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 HYAL2Q12891 473 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 GBX1Q14549 363 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 PEA15Q15121 130 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 TXNDC8Q6A555 127 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 MEPCEQ7L2J0 689 aaKnown RBP8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 FAM122BQ7Z309 247 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 CMTM8Q8IZV2 173 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 WDR20Q8TBZ3 569 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 LKAAEAR1Q8TD35 194 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 RBM18Q96H35 190 aaKnown RBP8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 HS6ST2Q96MM7 605 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 SEC22CQ9BRL7 303 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 MARVELD1Q9BSK0 173 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 SORBS1Q9BX66 1292 aaKnown RBP8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 PINK1Q9BXM7 581 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 NKX6-2Q9C056 277 aaPredicted RBP8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 EIF5A2Q9GZV4 153 aaKnown RBP8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 DMRT3Q9NQL9 472 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 TMEM184CQ9NVA4 438 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 PGAP2Q9UHJ9 254 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 NME7Q9Y5B8 376 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 NPFFR2Q9Y5X5 522 aa8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 PRRC2BQ5JSZ5 2229 aaKnown RBP8.53□□□□□ -1.04
CRNKL1-201ENST00000377327 H0YIV9 168 aa8.52□□□□□ -1.04
CRNKL1-201ENST00000377327 SGK494L7N484 410 aa8.52□□□□□ -1.04
CRNKL1-201ENST00000377327 NPC1O15118 1278 aa8.52□□□□□ -1.04
CRNKL1-201ENST00000377327 RAB3DO95716 219 aa8.52□□□□□ -1.04
CRNKL1-201ENST00000377327 MAS1P04201 325 aa8.52□□□□□ -1.04
CRNKL1-201ENST00000377327 ZNF823P16415 610 aa8.52□□□□□ -1.04
CRNKL1-201ENST00000377327 SEC61A1P61619 476 aaKnown RBP8.52□□□□□ -1.04
CRNKL1-201ENST00000377327 SYPL1Q16563 259 aa8.52□□□□□ -1.04
CRNKL1-201ENST00000377327 CDNFQ49AH0 187 aa8.52□□□□□ -1.04
CRNKL1-201ENST00000377327 KIAA1211LQ6NV74 962 aa8.52□□□□□ -1.04
CRNKL1-201ENST00000377327 TMUB2Q71RG4 321 aa8.52□□□□□ -1.04
CRNKL1-201ENST00000377327 ZNF280BQ86YH2 543 aa8.52□□□□□ -1.04
CRNKL1-201ENST00000377327 WDSUB1Q8N9V3 476 aa8.52□□□□□ -1.04
CRNKL1-201ENST00000377327 CLRN3Q8NCR9 226 aa8.52□□□□□ -1.04
CRNKL1-201ENST00000377327 OR52E2Q8NGJ4 325 aa8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms