RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 PTBP1P26599 531 aaKnown RBP eCLIP23.58■■□□□ 1.36
C9orf40-201ENST00000376854 FZD5Q13467 585 aa23.58■■□□□ 1.36
C9orf40-201ENST00000376854 C1QTNF12Q5T7M4 302 aa23.58■■□□□ 1.36
C9orf40-201ENST00000376854 TMEM91Q6ZNR0 172 aa23.58■■□□□ 1.36
C9orf40-201ENST00000376854 ZC3HAV1LQ96H79 300 aaKnown RBP23.58■■□□□ 1.36
C9orf40-201ENST00000376854 TBC1D3KA0A087X1G2 549 aa23.57■■□□□ 1.36
C9orf40-201ENST00000376854 TBC1D3FA6NER0 549 aaPredicted RBP23.57■■□□□ 1.36
C9orf40-201ENST00000376854 NARSO43776 548 aaKnown RBP23.57■■□□□ 1.36
C9orf40-201ENST00000376854 RNGTTO60942 597 aaKnown RBP23.57■■□□□ 1.36
C9orf40-201ENST00000376854 CFL1P23528 166 aaKnown RBP23.57■■□□□ 1.36
C9orf40-201ENST00000376854 IGFALSP35858 605 aa23.57■■□□□ 1.36
C9orf40-201ENST00000376854 SNRPNP63162 240 aaKnown RBP23.57■■□□□ 1.36
C9orf40-201ENST00000376854 TBC1D3GQ6DHY5 549 aa23.57■■□□□ 1.36
C9orf40-201ENST00000376854 PLBD1Q6P4A8 553 aa23.57■■□□□ 1.36
C9orf40-201ENST00000376854 SFXN1Q9H9B4 322 aa23.57■■□□□ 1.36
C9orf40-201ENST00000376854 NTMQ9P121 344 aa23.57■■□□□ 1.36
C9orf40-201ENST00000376854 LYRM1O43325 122 aa23.56■■□□□ 1.36
C9orf40-201ENST00000376854 AMIGO1Q86WK6 493 aa23.56■■□□□ 1.36
C9orf40-201ENST00000376854 PAQR7Q86WK9 346 aa23.56■■□□□ 1.36
C9orf40-201ENST00000376854 NACC2Q96BF6 587 aa23.56■■□□□ 1.36
C9orf40-201ENST00000376854 TMEM43Q9BTV4 400 aa23.56■■□□□ 1.36
C9orf40-201ENST00000376854 KIR3DX1Q9H7L2 352 aa23.56■■□□□ 1.36
C9orf40-201ENST00000376854 PTGFRNQ9P2B2 879 aa23.56■■□□□ 1.36
C9orf40-201ENST00000376854 ADAM30Q9UKF2 790 aa23.56■■□□□ 1.36
C9orf40-201ENST00000376854 COLEC10Q9Y6Z7 277 aa23.56■■□□□ 1.36
C9orf40-201ENST00000376854 CENPVL1A0A0U1RR11 272 aa23.56■■□□□ 1.36
C9orf40-201ENST00000376854 A0A1W2PQU0 124 aa23.56■■□□□ 1.36
C9orf40-201ENST00000376854 J3QRE1 110 aa23.56■■□□□ 1.36
C9orf40-201ENST00000376854 BTN3A3O00478 584 aa23.56■■□□□ 1.36
C9orf40-201ENST00000376854 SCO2O43819 266 aa23.56■■□□□ 1.36
C9orf40-201ENST00000376854 ZGLP1P0C6A0 271 aa23.56■■□□□ 1.36
C9orf40-201ENST00000376854 TNFRSF17Q02223 184 aa23.56■■□□□ 1.36
C9orf40-201ENST00000376854 ARHGAP11BQ3KRB8 267 aa23.56■■□□□ 1.36
C9orf40-201ENST00000376854 PAMR1Q6UXH9 720 aa23.56■■□□□ 1.36
C9orf40-201ENST00000376854 ZNF438Q7Z4V0 828 aa23.56■■□□□ 1.36
C9orf40-201ENST00000376854 GID4Q8IVV7 300 aa23.56■■□□□ 1.36
C9orf40-201ENST00000376854 DUSP18Q8NEJ0 188 aa23.56■■□□□ 1.36
C9orf40-201ENST00000376854 NLGN4YQ8NFZ3 816 aaPredicted RBP23.56■■□□□ 1.36
C9orf40-201ENST00000376854 LCN9Q8WX39 176 aa23.56■■□□□ 1.36
C9orf40-201ENST00000376854 SLC17A9Q9BYT1 436 aa23.56■■□□□ 1.36
C9orf40-201ENST00000376854 CLCA3PQ9Y6N3 262 aa23.56■■□□□ 1.36
C9orf40-201ENST00000376854 SNRNP200O75643 2136 aaKnown RBP23.56■■□□□ 1.36
C9orf40-201ENST00000376854 C12orf71A8MTZ7 269 aa23.55■■□□□ 1.36
C9orf40-201ENST00000376854 DVL2O14641 736 aa23.55■■□□□ 1.36
C9orf40-201ENST00000376854 RNF13O43567 381 aa23.55■■□□□ 1.36
C9orf40-201ENST00000376854 PAICSP22234 425 aaKnown RBP23.55■■□□□ 1.36
C9orf40-201ENST00000376854 ZNF136P52737 540 aa23.55■■□□□ 1.36
C9orf40-201ENST00000376854 RGS1Q08116 209 aa23.55■■□□□ 1.36
C9orf40-201ENST00000376854 RIN1Q13671 783 aa23.55■■□□□ 1.36
C9orf40-201ENST00000376854 DUSP5Q16690 384 aa23.55■■□□□ 1.36
C9orf40-201ENST00000376854 CCNJQ5T5M9 372 aa23.55■■□□□ 1.36
C9orf40-201ENST00000376854 ASPGQ86U10 573 aa23.55■■□□□ 1.36
C9orf40-201ENST00000376854 OR4N5Q8IXE1 308 aa23.55■■□□□ 1.36
C9orf40-201ENST00000376854 OR14C36Q8NHC7 312 aa23.55■■□□□ 1.36
C9orf40-201ENST00000376854 ART5Q96L15 291 aa23.55■■□□□ 1.36
C9orf40-201ENST00000376854 DPH1Q9BZG8 443 aa23.55■■□□□ 1.36
C9orf40-201ENST00000376854 OR52D1Q9H346 318 aa23.55■■□□□ 1.36
C9orf40-201ENST00000376854 HEBP2Q9Y5Z4 205 aa23.55■■□□□ 1.36
C9orf40-201ENST00000376854 DNAH14Q0VDD8 3507 aa23.55■■□□□ 1.36
C9orf40-201ENST00000376854 FAM240BA0A1B0GVZ2 78 aa23.55■■□□□ 1.36
C9orf40-201ENST00000376854 UNC119BA6NIH7 251 aa23.55■■□□□ 1.36
C9orf40-201ENST00000376854 CENPBD1B2RD01 187 aa23.55■■□□□ 1.36
C9orf40-201ENST00000376854 FAM25AB3EWG3 89 aa23.55■■□□□ 1.36
C9orf40-201ENST00000376854 FAM25CB3EWG5 89 aa23.55■■□□□ 1.36
C9orf40-201ENST00000376854 FAM25GB3EWG6 89 aa23.55■■□□□ 1.36
C9orf40-201ENST00000376854 GTPBP1O00178 669 aaKnown RBP23.55■■□□□ 1.36
C9orf40-201ENST00000376854 RGS9O75916 674 aaPredicted RBP23.55■■□□□ 1.36
C9orf40-201ENST00000376854 GALP22466 123 aa23.55■■□□□ 1.36
C9orf40-201ENST00000376854 ALAS2P22557 587 aa23.55■■□□□ 1.36
C9orf40-201ENST00000376854 INPP1P49441 399 aa23.55■■□□□ 1.36
C9orf40-201ENST00000376854 RPS15AP62244 130 aaKnown RBP23.55■■□□□ 1.36
C9orf40-201ENST00000376854 TCEA2Q15560 299 aa23.55■■□□□ 1.36
C9orf40-201ENST00000376854 GPR68Q15743 365 aa23.55■■□□□ 1.36
C9orf40-201ENST00000376854 OR2L13Q8N349 312 aa23.55■■□□□ 1.36
C9orf40-201ENST00000376854 ACBD7Q8N6N7 88 aa23.55■■□□□ 1.36
C9orf40-201ENST00000376854 OR4K14Q8NGD5 310 aa23.55■■□□□ 1.36
C9orf40-201ENST00000376854 BRIX1Q8TDN6 353 aaKnown RBP23.55■■□□□ 1.36
C9orf40-201ENST00000376854 ZFPM2Q8WW38 1151 aa23.55■■□□□ 1.36
C9orf40-201ENST00000376854 SLX1AQ9BQ83 275 aa23.55■■□□□ 1.36
C9orf40-201ENST00000376854 KXD1Q9BQD3 176 aa23.55■■□□□ 1.36
C9orf40-201ENST00000376854 APOOQ9BUR5 198 aa23.55■■□□□ 1.36
C9orf40-201ENST00000376854 TMEM106CQ9BVX2 250 aa23.55■■□□□ 1.36
C9orf40-201ENST00000376854 MED20Q9H944 212 aa23.55■■□□□ 1.36
C9orf40-201ENST00000376854 OBP2AQ9NY56 170 aa23.55■■□□□ 1.36
C9orf40-201ENST00000376854 NLKQ9UBE8 527 aa23.55■■□□□ 1.36
C9orf40-201ENST00000376854 ALG5Q9Y673 324 aa23.55■■□□□ 1.36
C9orf40-201ENST00000376854 ATG2AQ2TAZ0 1938 aa23.54■■□□□ 1.36
C9orf40-201ENST00000376854 ZC3H12DA2A288 527 aaKnown RBP23.54■■□□□ 1.36
C9orf40-201ENST00000376854 ANKRD34BA5PLL1 514 aa23.54■■□□□ 1.36
C9orf40-201ENST00000376854 SLC19A2O60779 497 aa23.54■■□□□ 1.36
C9orf40-201ENST00000376854 EN2P19622 333 aaPredicted RBP23.54■■□□□ 1.36
C9orf40-201ENST00000376854 MAT2AP31153 395 aaKnown RBP23.54■■□□□ 1.36
C9orf40-201ENST00000376854 RNF144AP50876 292 aaPredicted RBP23.54■■□□□ 1.36
C9orf40-201ENST00000376854 EEF1A1P68104 462 aaKnown RBP23.54■■□□□ 1.36
C9orf40-201ENST00000376854 BDH1Q02338 343 aa23.54■■□□□ 1.36
C9orf40-201ENST00000376854 EIPR1Q53HC9 387 aa23.54■■□□□ 1.36
C9orf40-201ENST00000376854 RANBP3LQ86VV4 465 aaPredicted RBP23.54■■□□□ 1.36
C9orf40-201ENST00000376854 FANK1Q8TC84 345 aa23.54■■□□□ 1.36
C9orf40-201ENST00000376854 IGFLR1Q9H665 355 aa23.54■■□□□ 1.36
C9orf40-201ENST00000376854 SYNDIG1Q9H7V2 258 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms